Ayam009035.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- ECU03_0790
- Assembly
- None
- Location
- AY:28066-42641[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.00032 1.5 8.7 0.0 26 49 322 345 306 348 0.89 2 6 0.00032 1.5 8.7 0.0 26 49 448 471 432 474 0.89 3 6 0.43 2.1e+03 -1.3 0.0 26 49 513 536 504 538 0.85 4 6 0.0039 19 5.2 0.0 26 49 578 601 566 604 0.91 5 6 0.12 5.9e+02 0.4 0.1 23 49 640 666 622 668 0.74 6 6 0.00014 0.67 9.9 0.0 26 49 708 731 694 733 0.88
Sequence Information
- Coding Sequence
- ATGGACAGCAGGATATGTCTAGCAAGCGACTGTGACGCACTGAATACAAAAACACAAGAGGCGCAGTGCAATGTACAGATGTTTCCACCAACAATTAAACAGGAAACATTACAGTGTTGTGATGAGAAAGAAACTAACTGCGATAATCACATGTCATTAAAGTCATCGAATCGTGTCAATTACTATGATGATCAATTCTGTGTATCGACAGAGGTGAAAGAAGAAGAAATTCAGTCATCAACAGTAGTATCATGCATCAACAAAAGCGTTATAGATAGTTATATGGTTTTTGAAAATGAGGAACTATCAAAAGTTCTAGAGACACAAGAAATTAAACAGGAAGTTTCACAGGAGGCATTCTCATTTATTAAAACAGAAGAAATCCATGACATAAACAACAAGTTTATAGCAAAAACAGAGATGTCAGAAGAGTACCGAATACTGGGTAGTGCTGGAGATACAAGTGTACTTTATAAAGTCGAGACATTTCATCAAGAAGCTGAGCCCAAAATGTGTGGTGGAATATTAAAAAATAAATTAAATTTATTAACTCACAATAATGAACGTATAAAAACTGAACCACCTACATTAGTGGCTAATGAAGGAAATGAGTTACACAAGTGCCAATTATGCGATGAATATTTTTATTATAATAATATGCTTGCACATGTGGATGATGTACACAGCCATAAAAAACACAAATCTGAATTATATCATAAGAGTGTAAAGAAAATGCATGCTGCTAGGAGTGTACATGAAATTAATTACAAATGTGACCCCTGTAAGCGGACATATAAAAGTAAATTTGCTTTAGTGTCGCACTTTAAAAAGATTCATTATAGTTATGGGAGGATATTTAAATGTTGGTGCGGGAAACAGTTCCGTACACCAAAATACCTATCTAATCATAAGTATCAAAAACATCGACACAAAATAGAAAAGGCAACACTAAAAAAAAAATTCCAATGTGATATTTGCAAGAAAATTATCAAAAGTAAAAGAAACTTAGAAGTACATATAACAAGTATGCATTATGATTATGGTAAAAGTTTTAAATGTTGGTGTGGGAAACAGTTCCGTACACCAAAATACCTATCTNGTGTAAAGAAAATGCATGCTGCTAGGAGTGTACATGAAATTAATTACAAATGTGACCCCTGTAAGCGGACATATAAAAGTAAATTTGCTTTAGTGTCGCACTTTAAAAAGATTCATTATAGTTATGGGAGGATATTTAAATGTTGGTGCGGGAAACAGTTCCGTACACCAAAATACCTATCTAATCATAAGTATCAAAAACATCGACACAAAATAGAAAAGGCAACACTAAAAAAAAAATTCCAATGTGATATTTGCAAGAAAATTATCAAAAGTAAAAGAAACTTAGAAGTACATATAACAAGTATGCATTATGATTATGGTAAAAGTTTTAAATGTTGGTGTGGGAAACAGTTCCGTACACCAAAATACCTATCTGATCATAAGTATCGACAACATTGCCCCAAAATAGAAAATGCAACACAAAAAAAGTTATTCCAATGTGATATTTGCAAGAAAATGTTCATAAGTAAAGGTAATTTAATAAAACATATAAAAGGTATTCATTATGATTATAGTAAAACATTTGAATGTTGGTGCGGGAAACAGTTCCGTACACCAAGATACCTATCTGATCATAAGTATCGACAACATCGCCCCAAAATAGAAAATGCAACACAAATAAAATTATTCCAATGTGATATTTGCAAGAAAATGTTCAAAAGTAAAAGTAACTTAAGAACACATATAACAACCATTCATTATGGAAATGGTAAAAGATTTGAATGCTGGTGCGGGAAACAGTTCCCTTCACTAAGATACCTATCTAGACATAAGCATAAACAACATGGCCCCAAAATAGAAAATTCAACACAAAAGAAAATATTCCAATGTGATATTTGCAAGAAAATGTTCATAAGAAAAGGTAATTTAATAAAACATATAACAAGTATTCATTATGATTATGGTAAAACATTTGAATGTTGGTGCGGGAAACAGTTCCGTACACCAATACACCTAAATGATCATAAGTATCGACAACATGGCCCCAAAATAGAAAATGCAACACAAAAAAAAATATTTCAATGTGATATTTGCAAGAAAATTATCAAAAATAAAGGTAATTTAAAAAGACATATAACAAATATTCATTATGATTATGGGAGAATATTTGAAAGTTGA
- Protein Sequence
- MDSRICLASDCDALNTKTQEAQCNVQMFPPTIKQETLQCCDEKETNCDNHMSLKSSNRVNYYDDQFCVSTEVKEEEIQSSTVVSCINKSVIDSYMVFENEELSKVLETQEIKQEVSQEAFSFIKTEEIHDINNKFIAKTEMSEEYRILGSAGDTSVLYKVETFHQEAEPKMCGGILKNKLNLLTHNNERIKTEPPTLVANEGNELHKCQLCDEYFYYNNMLAHVDDVHSHKKHKSELYHKSVKKMHAARSVHEINYKCDPCKRTYKSKFALVSHFKKIHYSYGRIFKCWCGKQFRTPKYLSNHKYQKHRHKIEKATLKKKFQCDICKKIIKSKRNLEVHITSMHYDYGKSFKCWCGKQFRTPKYLSXVKKMHAARSVHEINYKCDPCKRTYKSKFALVSHFKKIHYSYGRIFKCWCGKQFRTPKYLSNHKYQKHRHKIEKATLKKKFQCDICKKIIKSKRNLEVHITSMHYDYGKSFKCWCGKQFRTPKYLSDHKYRQHCPKIENATQKKLFQCDICKKMFISKGNLIKHIKGIHYDYSKTFECWCGKQFRTPRYLSDHKYRQHRPKIENATQIKLFQCDICKKMFKSKSNLRTHITTIHYGNGKRFECWCGKQFPSLRYLSRHKHKQHGPKIENSTQKKIFQCDICKKMFIRKGNLIKHITSIHYDYGKTFECWCGKQFRTPIHLNDHKYRQHGPKIENATQKKIFQCDICKKIIKNKGNLKRHITNIHYDYGRIFES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114289;
- 90% Identity
- iTF_00114289;
- 80% Identity
- iTF_00114289;