Ayam009035.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Antheraea yamamai
Gene Symbol
ECU03_0790
Assembly
None
Location
AY:28066-42641[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.56 27 5.2 0.6 1 19 206 223 206 228 0.74
2 16 0.013 0.63 10.4 2.2 1 23 256 279 256 279 0.97
3 16 0.026 1.2 9.4 1.5 5 23 289 308 287 308 0.88
4 16 6.8e-05 0.0032 17.6 0.5 1 23 321 344 321 344 0.96
5 16 1.4 66 4.0 0.6 5 16 354 365 351 367 0.88
6 16 0.013 0.63 10.4 2.2 1 23 382 405 382 405 0.97
7 16 0.026 1.2 9.4 1.5 5 23 415 434 413 434 0.88
8 16 6.8e-05 0.0032 17.6 0.5 1 23 447 470 447 470 0.96
9 16 0.024 1.1 9.5 1.4 5 23 480 499 477 499 0.92
10 16 3.4e-07 1.6e-05 24.8 0.3 1 23 512 535 512 535 0.96
11 16 0.021 0.97 9.7 0.7 5 23 545 564 543 564 0.92
12 16 6.4e-08 3e-06 27.1 2.0 1 23 577 600 577 600 0.98
13 16 0.084 4 7.8 2.1 5 23 610 629 608 629 0.93
14 16 2.9e-07 1.3e-05 25.0 0.6 1 23 642 665 642 665 0.97
15 16 0.01 0.47 10.7 1.2 5 23 675 694 673 694 0.92
16 16 1.1e-05 0.00053 20.0 0.6 1 23 707 730 707 730 0.95

Sequence Information

Coding Sequence
ATGGACAGCAGGATATGTCTAGCAAGCGACTGTGACGCACTGAATACAAAAACACAAGAGGCGCAGTGCAATGTACAGATGTTTCCACCAACAATTAAACAGGAAACATTACAGTGTTGTGATGAGAAAGAAACTAACTGCGATAATCACATGTCATTAAAGTCATCGAATCGTGTCAATTACTATGATGATCAATTCTGTGTATCGACAGAGGTGAAAGAAGAAGAAATTCAGTCATCAACAGTAGTATCATGCATCAACAAAAGCGTTATAGATAGTTATATGGTTTTTGAAAATGAGGAACTATCAAAAGTTCTAGAGACACAAGAAATTAAACAGGAAGTTTCACAGGAGGCATTCTCATTTATTAAAACAGAAGAAATCCATGACATAAACAACAAGTTTATAGCAAAAACAGAGATGTCAGAAGAGTACCGAATACTGGGTAGTGCTGGAGATACAAGTGTACTTTATAAAGTCGAGACATTTCATCAAGAAGCTGAGCCCAAAATGTGTGGTGGAATATTAAAAAATAAATTAAATTTATTAACTCACAATAATGAACGTATAAAAACTGAACCACCTACATTAGTGGCTAATGAAGGAAATGAGTTACACAAGTGCCAATTATGCGATGAATATTTTTATTATAATAATATGCTTGCACATGTGGATGATGTACACAGCCATAAAAAACACAAATCTGAATTATATCATAAGAGTGTAAAGAAAATGCATGCTGCTAGGAGTGTACATGAAATTAATTACAAATGTGACCCCTGTAAGCGGACATATAAAAGTAAATTTGCTTTAGTGTCGCACTTTAAAAAGATTCATTATAGTTATGGGAGGATATTTAAATGTTGGTGCGGGAAACAGTTCCGTACACCAAAATACCTATCTAATCATAAGTATCAAAAACATCGACACAAAATAGAAAAGGCAACACTAAAAAAAAAATTCCAATGTGATATTTGCAAGAAAATTATCAAAAGTAAAAGAAACTTAGAAGTACATATAACAAGTATGCATTATGATTATGGTAAAAGTTTTAAATGTTGGTGTGGGAAACAGTTCCGTACACCAAAATACCTATCTNGTGTAAAGAAAATGCATGCTGCTAGGAGTGTACATGAAATTAATTACAAATGTGACCCCTGTAAGCGGACATATAAAAGTAAATTTGCTTTAGTGTCGCACTTTAAAAAGATTCATTATAGTTATGGGAGGATATTTAAATGTTGGTGCGGGAAACAGTTCCGTACACCAAAATACCTATCTAATCATAAGTATCAAAAACATCGACACAAAATAGAAAAGGCAACACTAAAAAAAAAATTCCAATGTGATATTTGCAAGAAAATTATCAAAAGTAAAAGAAACTTAGAAGTACATATAACAAGTATGCATTATGATTATGGTAAAAGTTTTAAATGTTGGTGTGGGAAACAGTTCCGTACACCAAAATACCTATCTGATCATAAGTATCGACAACATTGCCCCAAAATAGAAAATGCAACACAAAAAAAGTTATTCCAATGTGATATTTGCAAGAAAATGTTCATAAGTAAAGGTAATTTAATAAAACATATAAAAGGTATTCATTATGATTATAGTAAAACATTTGAATGTTGGTGCGGGAAACAGTTCCGTACACCAAGATACCTATCTGATCATAAGTATCGACAACATCGCCCCAAAATAGAAAATGCAACACAAATAAAATTATTCCAATGTGATATTTGCAAGAAAATGTTCAAAAGTAAAAGTAACTTAAGAACACATATAACAACCATTCATTATGGAAATGGTAAAAGATTTGAATGCTGGTGCGGGAAACAGTTCCCTTCACTAAGATACCTATCTAGACATAAGCATAAACAACATGGCCCCAAAATAGAAAATTCAACACAAAAGAAAATATTCCAATGTGATATTTGCAAGAAAATGTTCATAAGAAAAGGTAATTTAATAAAACATATAACAAGTATTCATTATGATTATGGTAAAACATTTGAATGTTGGTGCGGGAAACAGTTCCGTACACCAATACACCTAAATGATCATAAGTATCGACAACATGGCCCCAAAATAGAAAATGCAACACAAAAAAAAATATTTCAATGTGATATTTGCAAGAAAATTATCAAAAATAAAGGTAATTTAAAAAGACATATAACAAATATTCATTATGATTATGGGAGAATATTTGAAAGTTGA
Protein Sequence
MDSRICLASDCDALNTKTQEAQCNVQMFPPTIKQETLQCCDEKETNCDNHMSLKSSNRVNYYDDQFCVSTEVKEEEIQSSTVVSCINKSVIDSYMVFENEELSKVLETQEIKQEVSQEAFSFIKTEEIHDINNKFIAKTEMSEEYRILGSAGDTSVLYKVETFHQEAEPKMCGGILKNKLNLLTHNNERIKTEPPTLVANEGNELHKCQLCDEYFYYNNMLAHVDDVHSHKKHKSELYHKSVKKMHAARSVHEINYKCDPCKRTYKSKFALVSHFKKIHYSYGRIFKCWCGKQFRTPKYLSNHKYQKHRHKIEKATLKKKFQCDICKKIIKSKRNLEVHITSMHYDYGKSFKCWCGKQFRTPKYLSXVKKMHAARSVHEINYKCDPCKRTYKSKFALVSHFKKIHYSYGRIFKCWCGKQFRTPKYLSNHKYQKHRHKIEKATLKKKFQCDICKKIIKSKRNLEVHITSMHYDYGKSFKCWCGKQFRTPKYLSDHKYRQHCPKIENATQKKLFQCDICKKMFISKGNLIKHIKGIHYDYSKTFECWCGKQFRTPRYLSDHKYRQHRPKIENATQIKLFQCDICKKMFKSKSNLRTHITTIHYGNGKRFECWCGKQFPSLRYLSRHKHKQHGPKIENSTQKKIFQCDICKKMFIRKGNLIKHITSIHYDYGKTFECWCGKQFRTPIHLNDHKYRQHGPKIENATQKKIFQCDICKKIIKNKGNLKRHITNIHYDYGRIFES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00114595;
90% Identity
iTF_00114595;
80% Identity
iTF_00114595;