Ayam010929.1
Basic Information
- Insect
- Antheraea yamamai
- Gene Symbol
- -
- Assembly
- None
- Location
- AY:505347-520796[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2.2e-06 0.0001 22.3 3.9 1 23 8 31 8 31 0.95 2 20 0.00056 0.026 14.7 0.3 2 23 37 59 36 59 0.94 3 20 9.3e-06 0.00044 20.3 0.2 2 23 68 90 68 90 0.97 4 20 3.7e-05 0.0017 18.4 1.9 2 23 99 121 98 121 0.94 5 20 9.7e-05 0.0046 17.1 0.3 2 23 129 151 129 151 0.96 6 20 6e-06 0.00028 20.9 0.7 2 23 159 181 158 181 0.96 7 20 5.7e-07 2.7e-05 24.1 1.6 1 23 187 210 187 210 0.98 8 20 0.008 0.38 11.0 0.2 2 23 263 285 262 285 0.95 9 20 0.00015 0.0069 16.5 3.3 1 23 311 334 311 334 0.97 10 20 0.81 38 4.7 0.5 2 21 342 361 341 362 0.91 11 20 0.012 0.58 10.5 0.5 2 23 371 393 371 393 0.95 12 20 0.0017 0.081 13.1 8.1 1 23 416 439 416 439 0.97 13 20 0.00031 0.015 15.5 2.5 2 23 446 468 445 468 0.96 14 20 2.8e-05 0.0013 18.8 2.2 2 23 475 497 474 497 0.94 15 20 0.00025 0.012 15.8 2.2 1 23 503 526 503 526 0.98 16 20 0.17 7.8 6.9 6.5 2 23 534 556 534 556 0.94 17 20 2.3e-05 0.0011 19.1 0.3 1 23 563 586 563 586 0.97 18 20 0.058 2.8 8.3 3.6 1 19 593 611 593 616 0.91 19 20 0.034 1.6 9.1 2.8 5 23 633 652 630 652 0.90 20 20 2 93 3.5 0.5 1 12 702 713 702 716 0.86
Sequence Information
- Coding Sequence
- ATGTATCATAATCAATTAGATTACGTATGTGACTATTGTAGCAGGTCATTCACTAGGAAATACAACCTGCAGACTCATATTGAAAACTGTCATATAAACTCTTCATGCTTCTGTGAGATATGCGATCAAACCTTTGGCAGTCCTGCTGGATTGCAGCTCCATTTATCTCGCGGGCATAATAGGTATTCCCAACCTTTCCCAGAATGCGATATTTGCGGCCGTATTTTTACAAGGAAACAAAACATAATGTCTCATATGATCACCGTGCATTTACAAGGTGTAGGTCCGGAGATACGTTGCAGGCTGTGTTCAAAAACTTTTACAACCGAGAGAAACTTAAAACGGCATGTCAATCAACTTCATAACCCAGATGTGGAGTACCCTACATGCGATGGATGTAATAAGATTTTTAAAGGGAAGCAATCGCTATTGGCCCATATTCAGAGCATGCACAACTCCGAACGCGGAGTGATTCAGTGTAATTTGTGCGAGAGAGTGTATACGAATAATCGAAACCTTAAGCGGCATATCGAGATGTTTCACGGAGAAAAGGGAGAGTTCAGATGCGATCTCTGCCCTAAAGTGTACACTTCGAATCAGAGCCTTAAACGGCATTTACGTACTACCCACAATTCAGACGACCGAGAGCCACTAAAATGCGATTTCTGTAGTAAACTAATTTTCGGTAGGGAAAATCTTGACAGTCACGTACAATTCTTCCATAACGGGCAAGAGAACTGTAGCACCAACGATGCGACTGATTATAATCTAAAAGTGAACGATGTCGTATGTCTAAAGTGTAATGAGAGTTTCGATGAAGAGCCTCAATTACGGCAACATGTGAAGAACAACCATTCATTTAAAAGCTTTTATAGATATTGCAAGAGATCTCTTTTAAAACAAATGGCAGAGTCAAAGAAGCAAACATTTTTCTGCTGCGAATACTGCACTAATTCCTTCAACAGTGTTTACGAATTGAAGAATCATATGAGAGTGAACCATGATAAAGAGTACTCGATGTCTACTTGCAATGTATGTTTTAACAGATTTTATAGTAAAGATTCGATTTTGGTCCATAAAATGCGTTGCCTACCGCCAGACAACGTAAACTCTTGCAATAACTGCGATAAGCTATTTACGGATATATCAAGTCTGGAGTTTCACGTTAGAATATTCCACCCACAATCTCAAATAGCTGATTCTAACATAACTTCGACTAATACTGATGATGCGGACGGTGGTTCATACAAATGCCACCACTGTGATAGGGTTTATTATAGCGACAGATCTCTGAAGCACCATATTAAATTAAAACATACCACAGACGAGGCCATGGAGTGCTGTTACTGCGGAAAAATCTGCAGCAACAAATACTATTTGGCATCACATGTGAAGATAGTTCATAATAATCACACTTGGTCCAAATGTGATTACTGCGACAAACAGTTCAAATCCAAAAGAAATATACGTAGACACATCGAATACACCCATTTGGGGATGCAAAGATACAAGTGTGTGGAATGCGAGACTTTATTTAAGGAGAAACGCAGTTTGAGGAAGCACGTCCGTACGAAACATCCAAATTCAGCATTGTTCCCCGAATGCCACATATGCCATAAAAGATTTGAATCGGCCAAATCTTGTAAGATCCATTTGAAGCTTTTGCATTCTTTTAACATGAACACGCATCCCTGCGATCTATGCCCCATATCGTTCAGTTCGAATGAAGCTTTAACCATCCACCTCCAGACTAAACATTTGGCTGAGGATGAGATATATAAGTGCGAGGAATGTAATCTAGTGTTCAAAGGTCACGAGACCTTTGAACAGCATAACGGGCAATGCCATGTGAATTTACTACCGAACATTAAGCAAAAAGTGCTACCTCGTTGCATTCTATGCATGAAAGATTTTAGTACGCGTAAAACTCTCAAACGCCATATCAAGAAGTTTCATGATTGTTTCGATGTAGATGAGCTGGCAAATTTTGGTTCTAGAAAACGTACGTTTAATGTAGAATGTGACCAATGTATCAAGAAATTCAATGATGATCTCTATTATAACACATATCTCAAGGTGAAGCATTCACGGGATTCCTTAATATTTAAATGCGAAACTTGTGGGAGTTCATATAATTCTCTAGAATATTCCATTCAACGGTATAAATTGCAGAATAGTGAGAGCTGTAAAAGTAAAATGATTCTAAGCGAGTTGTGTACAGCGGAAATGAGTGAAGAAGAGGCGTCTTACTTAGGATTTGGATCTTTACATGAGCTGATGGAACCTGAGAGTACTACTAATGATGTAAAGACTGAACCTGTTGATGTAATAGACACTGTCATAAAATTGGAGCCAATGTCACCATGA
- Protein Sequence
- MYHNQLDYVCDYCSRSFTRKYNLQTHIENCHINSSCFCEICDQTFGSPAGLQLHLSRGHNRYSQPFPECDICGRIFTRKQNIMSHMITVHLQGVGPEIRCRLCSKTFTTERNLKRHVNQLHNPDVEYPTCDGCNKIFKGKQSLLAHIQSMHNSERGVIQCNLCERVYTNNRNLKRHIEMFHGEKGEFRCDLCPKVYTSNQSLKRHLRTTHNSDDREPLKCDFCSKLIFGRENLDSHVQFFHNGQENCSTNDATDYNLKVNDVVCLKCNESFDEEPQLRQHVKNNHSFKSFYRYCKRSLLKQMAESKKQTFFCCEYCTNSFNSVYELKNHMRVNHDKEYSMSTCNVCFNRFYSKDSILVHKMRCLPPDNVNSCNNCDKLFTDISSLEFHVRIFHPQSQIADSNITSTNTDDADGGSYKCHHCDRVYYSDRSLKHHIKLKHTTDEAMECCYCGKICSNKYYLASHVKIVHNNHTWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCVECETLFKEKRSLRKHVRTKHPNSALFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCDLCPISFSSNEALTIHLQTKHLAEDEIYKCEECNLVFKGHETFEQHNGQCHVNLLPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHDCFDVDELANFGSRKRTFNVECDQCIKKFNDDLYYNTYLKVKHSRDSLIFKCETCGSSYNSLEYSIQRYKLQNSESCKSKMILSELCTAEMSEEEASYLGFGSLHELMEPESTTNDVKTEPVDVIDTVIKLEPMSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01316580; iTF_00113480; iTF_01312393; iTF_00113494; iTF_01316567; iTF_00114264; iTF_01317504;
- 90% Identity
- iTF_00113480; iTF_00113494; iTF_00114264;
- 80% Identity
- iTF_00114264;