Sjap035216.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- -
- Assembly
- GCA_033032175.1
- Location
- CM065334.1:7567357-7569723[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.11 1.3e+02 3.9 3.1 18 43 9 31 7 32 0.94 2 20 1.4 1.8e+03 0.3 0.3 16 43 35 59 32 60 0.72 3 20 0.00041 0.52 11.6 0.0 18 43 68 90 63 91 0.93 4 20 0.00049 0.62 11.4 1.4 16 44 97 122 95 122 0.92 5 20 0.089 1.1e+02 4.1 0.4 19 44 130 152 129 152 0.90 6 20 0.00039 0.49 11.7 3.2 12 43 153 181 151 182 0.88 7 20 0.00011 0.14 13.4 0.2 17 44 187 211 183 211 0.89 8 20 0.26 3.3e+02 2.6 0.0 17 43 218 241 212 242 0.81 9 20 0.12 1.5e+02 3.7 0.1 16 44 261 286 254 286 0.82 10 20 0.047 59 5.0 0.6 16 43 310 334 299 335 0.85 11 20 0.24 3e+02 2.7 0.2 14 44 367 394 354 394 0.79 12 20 0.0075 9.5 7.5 4.5 12 43 411 439 405 440 0.88 13 20 3.2 4.1e+03 -0.9 10.0 8 29 436 457 431 468 0.74 14 20 0.0031 3.9 8.8 5.1 5 43 462 497 459 498 0.88 15 20 0.2 2.5e+02 3.0 0.6 18 44 504 527 499 527 0.75 16 20 0.71 9e+02 1.2 1.0 18 28 534 544 530 563 0.82 17 20 2.1 2.7e+03 -0.3 0.1 34 43 577 586 564 587 0.77 18 20 0.00023 0.29 12.4 2.3 6 43 616 652 614 653 0.78 19 20 2.7 3.5e+03 -0.7 0.1 13 28 668 683 662 689 0.82 20 20 9.1 1.2e+04 -2.3 0.1 12 27 697 712 690 714 0.77
Sequence Information
- Coding Sequence
- ATGTTTATTAATCTGTTAGATTACATATGTGACTACTGCAGCAGATCATTTACAAGGAAGTATAACCTGCAGAATCACATCGAAAACTGTCATATAAACTCATCATGCTATTGTGATATATGCGAGCAGACGTTCGGCAGCCCAGCCGGCTTACAGCTCCATTTATCCCGCGGACATAATCGCTATTCGCAACCTTTCCCAGAATGCGACATCTGTGGACGCATTTTCACgagaaaacaaaacataatctcGCATATGATCACTGTACATTTGCAAGGTGTAGTCCCGAAGATATCTTGCAGACTCTGTTCGAAAACTTTTACAACCGAGAGGAATCTCAAACGGCATATCAATCAGCTCCATAACCCAGATGTTGAGTATCCCTCTTGTGATGGGTGTAATAAGGTATTTAAAGGCAAGCAGTCCCTATTAACTCATATCCAGAACATGCATAAATCCGACCGCGGGATGAGTCAGTGTAATTTGTGTGAGAGAGTGTATACGAATAATCGAAATCTTAAACGGCACGTTGAGATGTTTCACGGGGAAAAGGGGGAGTTCAGATGCGATCTTTGTCCTAAAGTGTACACTTCGAATCAGAGTCTTAAAAGGCATTTGCGTACCGCTCACAATACAGAAGATCGGGAACCTTTGAAATGTGATTTAtgctttaaaataatagttGGTAGAGAGAATTTCGACAGTCACGTACAGTTTTTCCATAACACCCAAGAGAACTGTAGCACCAACGATGTAAGTGATTATAATCCAAAAACGAaagatattttttgtagaaagtGTAATGAAACTTTCGATGAAGAGCCTCAGTTACGGCAACACGTGAAAAACAATCATtcgtttaaaacattttatagatATTGCAAGAGATCGCTATTAAAACAAATGTCAGACTCCAAGAAGCAGGTATTTTTCTGCTGCGAGTACTGTACCAACTCCTTCACTAGTGTTTACGAGTTGAAAAACCATATGAGAGTGAACCACGATAAGGAATACTCATTGTCTACTTGCAACGTatgttttaatagattttacaGCAAAGATACGATTTTGTCGCACAGAAAGCGGTGTCTTCCGCCAGATAACGTTAACACTTGCAATAATTGCGATAAGTTGTTTACGGATATATCAAGTTTGGAATTTCATGTGAGGATATTTCACCCGCAGTCTCAAATAGCTGATTCCAATATAACCTCGACTAATACTGATGATGCAGATAGCGGTTCATACAAATGCCATCACTGTGGTAGAGTTTATTATAGTGACAGATCTCTAAAGCATCATATTAAGTTAAAACACACGACAGACGAGGCGATGGAGTGTGTTTACTGCGGCAAAATTTGCAGCAACAAGTACTATTTAGCGTCGCATGTAAAGATAGTACATAACAATCACACTTGGTCGAAATGCGATTATTGCGACAAACAGTTTAAATCTAAAAGGAATATACGCAGACACATCGAGTACACCCATTTGGGTATGCAACGATATAAGTGCGTAGAATGCGAGACACTGTTTAAAGAGAAACGTAGTTTGAGAAAACATGTGCGCACAAAACATCCGAATTCAGCGTTGTTCCCTGAATGCCATATATGTCACAAGAGGTTCGAATCGGCGAAATCTTGTAAGATCCATCTGAAACTTTTGCATTCATTCAATATGAACACTCATCCCTGCGACCTATGCCCTATATCGTTCAGTTCGAATGAAGCTCTCACAGTTCACCTCCAAACAAAACATTTGGCTGAAGACGAAATATATAAATGCGAAGAATGCAATCTAGTCTTCAAAGGGCAGGAGACTTTCGAACAACATAATGGGCAATGCCATGTGAATTTACTACCCAACATAAAGCAAAAAGTGTTACCTCGTTGTATTTTATGCATGAAAGATTTCAGTACGCGCAAAACTCTAAAGCGGCATATAAAGAAATTCCACGATTGTTTCGAGGTCGATGAGCTAGCAAACTTTGGATCAAGAAGGCGAACTTTTAACGTTGAATGCGATCAATGtatcaaaaattttaatgatgatctccattataatatatatctcaAATTGAAAAATGTGCGCGATTCCGTCATATTCAAATGCGAAACATGTCGGAGTTCATATAATTCTCTAGAATATTCGATACAAAGGTATAAATTGATGAACAGTGAGagttgtaaaagtaaaatgatctTGAGTGAACTGTGTACAGCAGAAATGAGTGAGGACGAGGCGTCTTATTTCGGATTTGGATCTTTACATGAAATGATGGAGCCTGAAAGTACAACTAGTGACGTAAAATTGGAATCTATGAATGTAACAAAGACTATCATAAAACTAGAGCCAATGACACCATAG
- Protein Sequence
- MFINLLDYICDYCSRSFTRKYNLQNHIENCHINSSCYCDICEQTFGSPAGLQLHLSRGHNRYSQPFPECDICGRIFTRKQNIISHMITVHLQGVVPKISCRLCSKTFTTERNLKRHINQLHNPDVEYPSCDGCNKVFKGKQSLLTHIQNMHKSDRGMSQCNLCERVYTNNRNLKRHVEMFHGEKGEFRCDLCPKVYTSNQSLKRHLRTAHNTEDREPLKCDLCFKIIVGRENFDSHVQFFHNTQENCSTNDVSDYNPKTKDIFCRKCNETFDEEPQLRQHVKNNHSFKTFYRYCKRSLLKQMSDSKKQVFFCCEYCTNSFTSVYELKNHMRVNHDKEYSLSTCNVCFNRFYSKDTILSHRKRCLPPDNVNTCNNCDKLFTDISSLEFHVRIFHPQSQIADSNITSTNTDDADSGSYKCHHCGRVYYSDRSLKHHIKLKHTTDEAMECVYCGKICSNKYYLASHVKIVHNNHTWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCVECETLFKEKRSLRKHVRTKHPNSALFPECHICHKRFESAKSCKIHLKLLHSFNMNTHPCDLCPISFSSNEALTVHLQTKHLAEDEIYKCEECNLVFKGQETFEQHNGQCHVNLLPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHDCFEVDELANFGSRRRTFNVECDQCIKNFNDDLHYNIYLKLKNVRDSVIFKCETCRSSYNSLEYSIQRYKLMNSESCKSKMILSELCTAEMSEDEASYFGFGSLHEMMEPESTTSDVKLESMNVTKTIIKLEPMTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114274;
- 90% Identity
- iTF_01316580;
- 80% Identity
- iTF_01316580;