Basic Information

Gene Symbol
dmd-4
Assembly
GCA_035772565.1
Location
JAQQSE010000052.1:3699060-3707899[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3e-25 6.9e-21 74.6 9.9 1 47 8 54 8 54 0.98
2 2 0.078 5.8e+02 1.2 4.9 2 12 292 302 291 302 0.90

Sequence Information

Coding Sequence
ATGAACTCAAGTGGCAGAGCGCGTGTGCCAAAATGTGCGCGGTGCCGCAATCACGGTCTCATCTCCAGTCTACGCGGACACAAAAAGGCCTGCATCTATCGACAATGCCAATGTCCTAAATGTGGTCTTATAAAGGAAAGACAGCGAATCATGGCAGCTCAGGTGGCGCTGAAGAGGCAACAAGCGGCTGAAGATAAAATAGCGTTACACTTAGCGTCTGTGCAGACCGGGACATCGTTAGATGCTTTACCTCCAGGCCGCATTTATGGAATGAGGGTAACTGAACCTTGCCCAAGCACTGGACAAGAGCCAGATTCAGCAGCTGACGATAACACTTTAATTCATATAGACAGCGAGACAAACGATTCCCTTCCAGAGTGTTGCAGTAACACTCCTGATACTGCTTCCACTTCTTTAGCATTTAATACATTGCGCACTAAAGATTTTAACAATGCTGTTACCGAAGACGTGACTGCTAGCGATGCTACTGTTAGTACTGCTGGATTGGAGATGCTTCGCAAGCTGTTCCCCGGCAAGAAGCGATCAGTATTGGAACTAGTTCTTCGACGGTGCAACCATGACTTGCTGCGTGCGATAGAACACTTCAATGCTACACATaatcaACGAGAAAAGGTACCTGATACAAGTGATTCGAGTTTCGAAGGTTCCGTGTCAAGTTCTGAAGAGGCAGAATTGAGATGGTCAGCTTTTCGTCCTGTTGGTAGGCGCGCTCCGATGTTGCCTGCTCTAGTGATGGGAAGAGTATGCGGTTCAGAATGGCTGGTTCCACTACCCGCTCTGCCTACATTATCCGCGCCTTTGCTATTACCACTGCAGCATCAACGTGCTCCATCAGCTCTTCGTAATCCTTGCACACCGGATTGTCGACAGTGTAATAATCATAACTAA
Protein Sequence
MNSSGRARVPKCARCRNHGLISSLRGHKKACIYRQCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVQTGTSLDALPPGRIYGMRVTEPCPSTGQEPDSAADDNTLIHIDSETNDSLPECCSNTPDTASTSLAFNTLRTKDFNNAVTEDVTASDATVSTAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAIEHFNATHNQREKVPDTSDSSFEGSVSSSEEAELRWSAFRPVGRRAPMLPALVMGRVCGSEWLVPLPALPTLSAPLLLPLQHQRAPSALRNPCTPDCRQCNNHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00662271;
80% Identity
-