Agla001836.1
Basic Information
- Insect
- Anoplophora glabripennis
- Gene Symbol
- bab2
- Assembly
- GCA_000390285.2
- Location
- NW:268114-274259[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-15 6.7e-13 47.8 0.1 2 45 352 395 351 395 0.96 2 2 0.79 4.4e+02 0.4 0.6 6 17 462 474 458 477 0.81
Sequence Information
- Coding Sequence
- ATGGGCACAGCACAGCAGTACTGCCTGAGGTGGAACAACCACCGCTCGAACCTCCTAACCGTCTTCGACGAACTCCTCCAGAACGAAGCCTTCACCGACGTCACCCTAGTATGCGAGGGCGGCGGTCCCATCAAGTGCCACAGGATGGTGCTCGCTGCCTGTTCCCCATATTTCCAAAACCTCTTCACCGGCCTGCCTTGCAAGCACCCCGTGGTCGTCCTGAAAGACGTCAAATACTCGGAGATCAAGGCTATCCTCGAATACATGTACAGAGGGGAAGTAAACGTAGCCCAGGATCAACTAGCCGCTTTATTAAAGGTGGCGGAAGCCTTAAAAGTGAAAGGTTTGGTGGAGGAGAACAGATCCAACAAGAGCCCCAAGAACGAAGAACCCATGGACCACTCGCCCTCCATCACCACTTCGAACTCGGTGATGCAGAGCTCCGTCCACAGCAGCAGTAATAGTTCTCCCCCGCATTCGACCAACTCCATGTACAAGAATCCTTACAACTTGTACACCACCAAACCTCAAGAGCACAACTCTAGAATGAATTTACCCATGTGGGCGATGCCGGGACTACCCTTACCGCCCCATACGACTCCAGTGCCTAACCCCAGCCACCCCCACACCGCCGCCACTGCTGCTGCCATGCTGAACTGCTATGAGGCGGCTAGCTCGGACATTTCCCCGCTCAAGAGGAAGAAGCTGTCCAGTTTATTGATGAACAGAGATACGCCGATCCTGAGGACGGTACTGGGCCAAGGCCAGGCCGATTCGTCTCAACCTGTTAGCCTTGTGTGCCATCCGGACAGCGCCGAACGTTCGGGAACAACCGAAGAACGCGTTAAGCATGTGAAAAATGAACCATCCGAGGACGCCCAATCGCCGTATACCGATTTCACGCTGATGAATGACGAGGAGGACAAATCCAAGCTAGCCATACCTTCATCCTCGCCCCAATCCTTCTCTCACGAGATGAGAGGAGTAAGCTCCGGCATAGCCACCTACGTGCCTTCCCAAAAACCCGAATGGAAACGCTACAAGCAGTATTCGAGGGACGAAATCATGTCCGCCATAGAAGCGGTGAGAAACGGGATGTCGGCCTTACAAGCGGCCCGAAAATACGGCGTACCATCTCGAACGCTCTACGACAAAGTTAAAAAACTGGGGATAACCACCAGTAGACCCTTCAAACGAGGTACCAACGGCAGTACAGCGTGCTTCCCCTACGGCACTGGATCCCCCTATGGAGGACATTTGTCCGAGACCGACGAAGGACCCATAAACAACAATTCCGCTCTGATAGATGCCACCACCTTCCTCCAGCACGCCATGGAGAACCGTGGAGGAGACGAACGGGAAGCCTTGGCCGCTATGGCGGCTGCTGCTGCGGCTCACGCAGTCGCGTCTGGTCATTCTACCAGTCCGAGCAACCACGGACGGGCGAGGAGTCCAAGCCCCAGTCCCACAATGCTGAAGTACATGAGGCATAGCAGTTTGACCCCTTCCCCAGCACCCCACAGTCACAGCGAGACCAACGGAAGCTCCGAGAGAGATCACGAGGAGGAAGAGGACCAGGTGGAGGATCTATCAATCGGACGAAAGGAATCCAGGGAGTCCAGAGTCATCATGCCACCTATGAACCAGGTCTCCGCTATCATGAAGAAAGAGGAGATGCTGATGGAGAGCATAAAGGAAGAGGCGGCGAGGAGAGAGGTGAGCGTCGAGAGAGAGGCGGAATGA
- Protein Sequence
- MGTAQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLVCEGGGPIKCHRMVLAACSPYFQNLFTGLPCKHPVVVLKDVKYSEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSNKSPKNEEPMDHSPSITTSNSVMQSSVHSSSNSSPPHSTNSMYKNPYNLYTTKPQEHNSRMNLPMWAMPGLPLPPHTTPVPNPSHPHTAATAAAMLNCYEAASSDISPLKRKKLSSLLMNRDTPILRTVLGQGQADSSQPVSLVCHPDSAERSGTTEERVKHVKNEPSEDAQSPYTDFTLMNDEEDKSKLAIPSSSPQSFSHEMRGVSSGIATYVPSQKPEWKRYKQYSRDEIMSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGTNGSTACFPYGTGSPYGGHLSETDEGPINNNSALIDATTFLQHAMENRGGDEREALAAMAAAAAAHAVASGHSTSPSNHGRARSPSPSPTMLKYMRHSSLTPSPAPHSHSETNGSSERDHEEEEDQVEDLSIGRKESRESRVIMPPMNQVSAIMKKEEMLMESIKEEAARREVSVEREAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_01226547;
- 80% Identity
- iTF_00110690;