Basic Information

Insect: Anoplophora glabripennis
Gene Symbol: bab2
Assembly: GCA_000390285.2
Location: NW:1348397-1404640[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.5e-11 8.6e-09 34.7 0.0 1 39 381 420 381 424 0.90

2 4 5.4e-13 3e-10 39.3 0.1 1 39 435 473 435 476 0.95

3 4 1.4e-18 8.1e-16 57.2 0.0 1 45 490 535 490 535 0.98

4 4 2e-16 1.1e-13 50.3 0.0 1 39 542 581 542 585 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.5e-11	8.6e-09	34.7	0.0	1	39	381	420	381	424	0.90
2	4	5.4e-13	3e-10	39.3	0.1	1	39	435	473	435	476	0.95
3	4	1.4e-18	8.1e-16	57.2	0.0	1	45	490	535	490	535	0.98
4	4	2e-16	1.1e-13	50.3	0.0	1	39	542	581	542	585	0.94

Sequence Information

Coding Sequence: ATGTCTGGGCAGCATTACTGTCTGCGATGGAACAATTATCAGAGCAATATGACCTCGGTTTTCCACCAGCTTCTCCAGAATGAAGCTTTCGTAGATGTTACTTTAGCCTGTAATGACTTATCACTAAAAGCCCACAAGGTAGTCTTATCAGCATGTTCCTCATATTTCCAGAAACTGTTGTTAGAGAATCCCTGCAAGCACCCAACGATAATAATGCCTCAAGACGTCTGCTACTCCGACCTCAAATTCATCATCGAGTTCGTTTACAAAGGGGAAATTGATGTCTCTCAGGCCGAGCTCCAGTCGATCCTGCGAACGGCGGACCAATTAAAGATCAAAGGCTTGTGCGAGTCGCCCGACGACAAAGAAAACTCCGAATCGCCCCTGCCCCTGTACTGCAAAGGTGGCAGGAAGTCCGCCTCCCCCAGGCACTTCAGGCTAGCGGACAGCGGCAACCGGAGGGCCAAATACCGCCGCACCAGCCTCCAGGAGAGACCATCGGATGAGACACCGGGCGGCTGCAGGGAGGGCAAAGCGCAGCCGGGCCACTCGTCGGATGAGGAAAATGACATGCCAGTAGCTCTGGATGAGCACAAGAGAAGCAGGCACCAGCCCGAGCAGACCAAACCACTCAACATGAGCAGCCATGGACTTATGACCGGACAGACAATCTTCTCCCAGTTCGGAGTGGACACCGATGACTTCCCCCCGGAACCTCCGGCACCCTCCGCCATCCCCGTCGGCCACGTGGACATGGCGGACCACTCGCCCACCCGTTCCCTCCTCACCAACACCCCTATCCATCGAACGGACATCTCGGACTCCACCAAGTACACTTTGGACATCAAAAAGGAGGCCGACATCAAGTTCGAAACGCTGCGGTCGTACGACCAGGACTCTCTTCTGGACATGGAGTCGCATATGTCCGGCCCTGACCATTCCATGGACAGCCACGACGATTGTGATAGGGGCCTGCATCCCAGCATGATGGTCCAGCAGGATTTCGTTGGAATGATGCCGGGCGTTTCGAATAGATTAGATGTAAATAGTGAAGATCAAGTACCTGGAACCAAAAATAATGGCCATAATGAAAACTTGCAACACACGCCCCGGTCACACGGGGGCGGACCAAAAACTTGGACTCAGGAAGATATGGATATGGCCTTAGATGCCTTAAGAAATCATAATATGAGCCTTACGAAgGCTTCGGCGACTTACGGTATTCCCTCCACTACTTTATGGCAAAGAGCACACAGACTAGGCATAGACACCCCGAAAAAGGAAGGACCAACGAAGTCTTGGACGGAAGAGAACCTCAACAGCGCTTTGGAAGCTTTACGGACCGGAACCATCTCGGCCAACAAAGCTAGTAAGGCGTACGGTATACCCAGCAGCACTCTATACAAAATAGCGAGACGAGAAGGAATAAGACTGGCAGCCCCTTTTAATGCGGCCCCGACCACATGGACGCCGGAGGATTTAGAGAAAGCTTTGGAATCCATCAGGACGGGGCAAACGTCTGTACAAAAGGCTTCTACTGAGTTCGGCATACCCACGGGGACGCTCTACGGAAGGTGCAAAAGGGAAGGCATAGAATTGTCACGGTCGAATCCTACGCCTTGGTCGGAAGACGCCATGGGTGAAGCACTGGAAGCTGTGAGgttGGGCCATATGTCTATAAATCAAGCAGCGATTCACTACAATTTGCCTTATTCCTCGCTGTATGGACGGTTCAAGCGAGGAATAAAATATGACTCGGATAACATTGAAGTAAATCAGGACAGTCAGTCGCAAATGGACGCGCATTCGTTCGGAATGGACTACAGCACCACCTCCCACCAACAAATTCAGTACCATAACCAGAATAGCTGA
Protein Sequence: MSGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYSDLKFIIEFVYKGEIDVSQAELQSILRTADQLKIKGLCESPDDKENSESPLPLYCKGGRKSASPRHFRLADSGNRRAKYRRTSLQERPSDETPGGCREGKAQPGHSSDEENDMPVALDEHKRSRHQPEQTKPLNMSSHGLMTGQTIFSQFGVDTDDFPPEPPAPSAIPVGHVDMADHSPTRSLLTNTPIHRTDISDSTKYTLDIKKEADIKFETLRSYDQDSLLDMESHMSGPDHSMDSHDDCDRGLHPSMMVQQDFVGMMPGVSNRLDVNSEDQVPGTKNNGHNENLQHTPRSHGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSDNIEVNQDSQSQMDAHSFGMDYSTTSHQQIQYHNQNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01289681;
90% Identity: iTF_01014164;
80% Identity: iTF_00110703;