Basic Information

Insect: Anoplolepis gracilipes
Gene Symbol: -
Assembly: GCA_031304115.1
Location: JAPWJP010000577.1:931587-939651[-]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-14 1.5e-10 41.8 0.2 10 70 267 325 260 329 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-14	1.5e-10	41.8	0.2	10	70	267	325	260	329	0.88

Sequence Information

Coding Sequence: ATGGACGGCGCAAATGTGAATGGCGGGAACGCCGAAGTTACGCGCGAGGATTCTAACCTAGAAAGCGGCGACGGTGGTGTTACTACCGTGCCAATGGAGGAGTCGTTTAGCGACAAGACGAGCGCCGCTAACGCGGATACGCAGGAGGTTAACGGCGATCTTAAAGGTTCGTCCAAGAAACACGGTGCGCCCTTTCCGCGTAGGAAAATGAAGAAGCTCAAGACCAATTCCACGAGCACCATCGAGAGTGACGCGATGGGGCCGCTCGAAACGAGGGGACGCAAACGTAAATTCTCGGAACTCGAAGACAGCTCCGAGGATTCGGAATTCAATGGCTTCGATTCGAAAGGGCTCGAACTGCAACCGGGTAGTCACGTTCTGAGGAAACTCATAGctgAAGCTGAACTGGCAGAAGCTCAAATTGTGAAACGTGTGAGATATTCAAAAAGGAACTTTGatattaaaggaaaaagagaagatgATCAAGATTCTGACGATATGAAAACCTATATTTATGACACAGACAGTTTGGAACATTTGAACATAGGGAAGATTAAAAAGGAAAGGGAATCTGACAAATCAGAAACAGATTCTATTGATATACCAAATAGCATAGATTCTGAAGTGGAGCcaaacaaaattgaaataacttCCAGTAGATCAGCAAATTCGTCATCGGCTACAAGTAGTCCATCTGCGATATCGCAAAAATCAAAAAGTAGTCGTGTTTCTCGTGGCCCTAGTCCAGGGGGAAAGCAAAAACCTCCTGTTGATATGACAAATCCGTTATACAAAGAGCCATTTAAATATGGATGGAAACGAGAGCTGGTATTTAGAGCAAGTAATGAGAGCTCCCTTAAAAAAATGgctgatatatattattatacaccaAAGGGTAAAAAAGTCAGGAGTTTTAGAGAGGTTGCAGAATCTCttagTTCAAAGGAGTTGACCATTGACAACTTTACATTCTTCAAAGAACCTATTGGGCTTAACGATCCTGAAAAGGAGATTGTTCGACACGCTAAAAGAATGGGAAGCTTAGGAGGATCCATGGGAAGAAAGTCTTTTGGTAACAAGAAAGCCACTCCAGTGAAAAAGCCAGTACAAGAACCTGCAGCAAAAAAACCTGTACAGGAACCTACAACAAGAAGGTCATTACAGGAAGCTGCAGCAAAGAAGTCAGTACAAGAGTCTCCAGCCCCTGTTCCTCCACCTGTTGCAGAAGTTTCAAAACCCGCTCCTGCACCTGTTCCAGTATCTACAAAAGTTACCCCTAAATCGACAAAAGCGTCAGCCTCTCCAGCATATAAGACAAAAGCAGCTGCAAAGAAAACTCCTCAAATAAAAATGAAACCACCAGTTGAAGAGAGTGAAATGCTTCCACCTCAACGAAGCACTGCAAATACAAGACGGAGTCAGCAAGTAGTGGAGAAAGTTCCTTCTGTCAAAACTAAAAGAGTGTTAAcGCCCAAAGTTCAAGAGCCATGCAGCATAAGATGTTCGACAAGTATGGGATTAATACCAAGTTTACAATGTCGAGTTTGTCTCTGTTTATATCATCCTGAATGTGTCGATGGCATGGAATTTGCAGGCAGTGACGAATATGTCTGCAAGAATTGTCAGCCAGATACTAAAGAATCTCATACGTCGAACAATCCATCTTTGACACCGCCTCCACTGATCCCAATTAGTATGTTGGGTgcacaaaatgcaaaatcgaAACATCAAACTAATTCATCTCCTCCGAAATTGCAAAGAATTCCGAAATCTGACAGCGCGGACGCGCAAACGAGAAATTCTTCGAAAGCTCCAAAAATACCATCCACCAACTCGTTGCCGTCAAACTTAGACAAAAAGGAAGGCACTTGGTTCCCTCAAACGGAAAATGAATTCTTACAAAGTCATGATGGTACTATGCCGAAACCGGCTCAAAATATCGCTTTAATGGGTGGTAAAAGATACATTGTAGTACCGAAGAATAATGCAATGGCAGTTCAACCAGCTATAACAGTGAGACCAGACAAGATTGGCGATAAACCGCCAATGCTTCAAGATGGTTCACTTACCGATATTTCGAATACTGTGGATAATCCTATTACAAAGTTACATACACCTCCACTCAAACACTTAAATATCGATTTACCGGAAAAAGTAAATGTTACATCtgataaagaaatttcaaaagataCGACACCTCTCATAGACCTTACATCTTCAGTTAACACTGAGATAACTGAGGCgtcagataataaaaataataaggatagtaaaaatattcctaAAAAAGATGACTCtgctgaaaaaatattagaaaataaatctatcaCGTCTAACATAGAGTGTGtgcttgaaaagaaaaaagcaaaTGTAGGTCCTACATTGTCTGAAAATAAATCTGTATGTACACCAGTACATACAACAGATACTGCAGACGTTTTTGAAGCAAATGATGAATCAATTAAAGCAACTTGTCGGCAATCGTTGTCAAGTAAAGCGGGTatagtaacaaaaattaaaaagaacaaGAGGAAGCAAAACCAGCAGGAAGTGGAACAGCAGCAAAATTTCATGAGTTCAGTTTGTGCCGGTTATCACGCCCTGCTTCGTATTTTCCAATATCTTAAAGTGCAAGAATTACTGCGGGCGGCGCGAGTTTGCAAGATGTGGCATGATCTTGCGGCTCATCCGTCTCTATGGAAGACGGTGCGTATGAAGAATAGCCAGGTGACTGATTGGGACGGTCTGGCGGAGACATTACAGCGACGCGGTACCCAACACCTAGATCTCAGAAAAATGCTAGTCTCTGGCGAATCAGATAACATTTGGAAGAAATTCTTGACAATCGTACCGCGAGTGACCAGTCTTGTCAAGCTTGAGCTATGTAGGTGTCCCGTTATGGTGGTCGAAGAAGTTATTAAGAGCTGTCCTCAGCTAGAAGTACTGAGCGCAATGTCGATTAAGTGCGATTCTCTCAACTTGGAATCGATTGGGAATCTAAGTCGATGCCAAGAACTCAGACTCAAAGCAATAAGTGGAATGTCATTGCAACAAGATCTTACACCTTTACAGAATTTAATACGCTTGACGCAACTGAGTTTAACATCAGTTAAAGAACttggaaagaaaagaattgatGTAATACAAGTATTGATAAACTTGGAGACGCTAGAATTGGGCGAATGTTCCGACTTTCCCGACAAGTTTGGAACTAATGTTTTAatcaagttaaataaattggaACGCCTCAGACTTGAAAAAGGTCAAGGATCCTGCTGTACATTTGATATTCTTGAAGGCGTATCAAGATTGGAAAATCTTTGTCAGATGGAATTAGTCAATTTTGACGTGAAGAATGGGTTTGACAAGTGTCTCGCTAATTGCAAGAACATTAAAAGGTTACTGATCATACCAACTTACATATCCCAATCGGCAACATCTAATAACATGGTGCTTGGAGGTGTCACAGAGTTATCAAATAACCTGACACATTTCATATGGGGTGTTACTCTTGAATTACTCAGGGTTACAGAACTGTTTGTTGATCAGTGCAATCTTATGAGTAAACAGGTTACTGGAGATTCTATACCAGTTTTAAAACCAGTTCCCTGTTTACGATTGATCGCGGATGTCGAAGATGAGAACGAAAATCAAAAAGgaGACGACAAGCAACAGTCGCATCCGGCGAGTCCACAAGTTGACATTTTACCGTTGCCGCAATTACAGAAGCTTCTCTTGACCGCGTTGCCCAAGACACgagttaaaattttgaaaattcctTTCCACGCCACATGGCGACAAAGCATTTTAGATACCGCGGCGCAATAA
Protein Sequence: MDGANVNGGNAEVTREDSNLESGDGGVTTVPMEESFSDKTSAANADTQEVNGDLKGSSKKHGAPFPRRKMKKLKTNSTSTIESDAMGPLETRGRKRKFSELEDSSEDSEFNGFDSKGLELQPGSHVLRKLIAEAELAEAQIVKRVRYSKRNFDIKGKREDDQDSDDMKTYIYDTDSLEHLNIGKIKKERESDKSETDSIDIPNSIDSEVEPNKIEITSSRSANSSSATSSPSAISQKSKSSRVSRGPSPGGKQKPPVDMTNPLYKEPFKYGWKRELVFRASNESSLKKMADIYYYTPKGKKVRSFREVAESLSSKELTIDNFTFFKEPIGLNDPEKEIVRHAKRMGSLGGSMGRKSFGNKKATPVKKPVQEPAAKKPVQEPTTRRSLQEAAAKKSVQESPAPVPPPVAEVSKPAPAPVPVSTKVTPKSTKASASPAYKTKAAAKKTPQIKMKPPVEESEMLPPQRSTANTRRSQQVVEKVPSVKTKRVLTPKVQEPCSIRCSTSMGLIPSLQCRVCLCLYHPECVDGMEFAGSDEYVCKNCQPDTKESHTSNNPSLTPPPLIPISMLGAQNAKSKHQTNSSPPKLQRIPKSDSADAQTRNSSKAPKIPSTNSLPSNLDKKEGTWFPQTENEFLQSHDGTMPKPAQNIALMGGKRYIVVPKNNAMAVQPAITVRPDKIGDKPPMLQDGSLTDISNTVDNPITKLHTPPLKHLNIDLPEKVNVTSDKEISKDTTPLIDLTSSVNTEITEASDNKNNKDSKNIPKKDDSAEKILENKSITSNIECVLEKKKANVGPTLSENKSVCTPVHTTDTADVFEANDESIKATCRQSLSSKAGIVTKIKKNKRKQNQQEVEQQQNFMSSVCAGYHALLRIFQYLKVQELLRAARVCKMWHDLAAHPSLWKTVRMKNSQVTDWDGLAETLQRRGTQHLDLRKMLVSGESDNIWKKFLTIVPRVTSLVKLELCRCPVMVVEEVIKSCPQLEVLSAMSIKCDSLNLESIGNLSRCQELRLKAISGMSLQQDLTPLQNLIRLTQLSLTSVKELGKKRIDVIQVLINLETLELGECSDFPDKFGTNVLIKLNKLERLRLEKGQGSCCTFDILEGVSRLENLCQMELVNFDVKNGFDKCLANCKNIKRLLIIPTYISQSATSNNMVLGGVTELSNNLTHFIWGVTLELLRVTELFVDQCNLMSKQVTGDSIPVLKPVPCLRLIADVEDENENQKGDDKQQSHPASPQVDILPLPQLQKLLLTALPKTRVKILKIPFHATWRQSILDTAAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00264997; iTF_00264273; iTF_01254796; iTF_01077467; iTF_00729303; iTF_01245223; iTF_00730057; iTF_00730737; iTF_00280604; iTF_00868798; iTF_00867399;
90% Identity: -
80% Identity: -