Aqua008751.1
Basic Information
- Insect
- Anopheles quadriannulatus
- Gene Symbol
- -
- Assembly
- GCA_000349065.1
- Location
- KB665398.1:5026102-5032671[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0056 0.27 11.2 2.8 2 23 425 446 424 446 0.97 2 24 2.9 1.4e+02 2.7 1.0 5 23 454 472 453 472 0.94 3 24 2.2 1.1e+02 3.1 0.0 3 23 497 524 495 524 0.78 4 24 0.82 40 4.4 1.3 2 23 531 552 530 552 0.89 5 24 1.3 66 3.7 0.3 1 22 558 576 558 578 0.76 6 24 0.00012 0.0057 16.5 0.2 1 20 590 609 590 610 0.97 7 24 0.0076 0.37 10.8 1.0 2 23 619 640 618 640 0.97 8 24 0.00012 0.0057 16.5 0.4 2 23 646 667 645 667 0.93 9 24 0.69 34 4.6 2.0 2 23 676 697 675 697 0.95 10 24 0.0002 0.0096 15.8 1.8 2 21 704 723 703 724 0.94 11 24 0.0018 0.086 12.8 3.1 1 23 735 757 735 757 0.98 12 24 0.00092 0.045 13.7 2.5 1 23 763 786 763 786 0.98 13 24 6.2 3e+02 1.7 1.6 1 22 1165 1188 1165 1190 0.62 14 24 0.013 0.61 10.1 3.3 2 23 1197 1218 1196 1218 0.97 15 24 0.018 0.86 9.7 2.8 2 23 1225 1246 1224 1246 0.98 16 24 0.013 0.61 10.1 0.9 1 23 1256 1278 1256 1278 0.97 17 24 2.2 1.1e+02 3.0 0.0 9 23 1315 1330 1302 1330 0.82 18 24 0.9 44 4.3 0.3 2 23 1337 1358 1336 1358 0.95 19 24 0.00012 0.0058 16.5 0.3 1 20 1396 1415 1396 1416 0.96 20 24 0.0081 0.4 10.7 1.9 2 23 1425 1446 1424 1446 0.97 21 24 0.00045 0.022 14.7 0.7 2 23 1452 1473 1451 1473 0.95 22 24 0.00043 0.021 14.7 2.0 3 21 1511 1529 1509 1530 0.94 23 24 1.2e-05 0.00061 19.6 0.8 1 23 1541 1563 1541 1563 0.99 24 24 0.00092 0.045 13.7 2.5 1 23 1569 1592 1569 1592 0.98
Sequence Information
- Coding Sequence
- ATGGCCCACATCACCAGCTGTGCGCTTTGTTTAACAGCCGAGTCCCAGTGGTTCGTTCGAGTATTTGACGAAGCTAACACGACGCTCAATATGGCACAGATCATATCGAAATATTTATGGTTTGATCTAAAACCGGCCGCCCAGCCGTGCGTGTGCGGTGAATGCTGGAGCAGTGTGCACGATTTTCATCAATTCTACACTAAACTGGAGAACATTCATTGTGACGAGTTAGTTGCAGCGGACAGTACAGAGCAACAACCGCCTGAATTTGAGCTTCCAGAAGAAACCAACCAAAAGGAAGATCAGTTGCAAAAAAGCATCGATGATGGGTATGAAAGGAAGCATGTTCCCACAGTTGAAGTCATTGACAGCAGCGAGAAGAGAAACAACTCAGACAGCGCTGCGAACGAACCGGCGAAACCCCACACGCAAACAGACGCCATGGACACTATGGACAAAGGAGACAAGAAACATTTCGTGGAGGTGGAAGATTACGCTAGCAATGATGATGACACCGGCGGCTATTGCCCATCGGATGACAACATGCTGGATGGTGATACACTTAACACCGAAGGCAGGGATGAATCTATCGATAAAAAGCCTACGATGAATAACGTAACCGTTGTCGCCATACCTGTGGAACAGCTCTCCGTAAAGCGTGGTAGAGGCCGTCCACCAAGACCAAAGCTGGAACAGCAAAGCGTAGCAGTAGATCCAAAAGAATCTCCAAAGGATACGAGCGTCTCGGAGGAAACACCTGCGAAACGTCCCAGGGGTCGTCCACCAAAGCGAAAGCTGGACATTTCAAGCGCCTCGCCGAACGTTGCTCAGAAAAATGAAGCACCGCCTGCTGTAATTGAAACGTCACTTGTTGCCACCACGACCGAACCCGTTAAGCGACGCAGAGGTAGACCACCGAAAAATGCCCTTACCGCCGTTGCGGTACATTCTGGCCGTGGGAGGAAAGTTCACTCTGTTACCGGCAACAAACGGTCAACCGCGCTGCGGACGAAAGTGAAGAAAGAAATAATACGTGGACAGGAGCCAACATACACGGATAGCGGTGAGAGCGAATCGGAAAATGGTTCAGATTATGAAGCGACGAGTGCTAAAAAAAAGCCACCAAAGCGTGAGAAGAGCGACCGGGACGAGCGAATATTTAAGTACGTCGATGAGTTTTGCTGCCATTACTGTGTGGAAAATGTGACGTTCAAGCGGTTCGTCGATGCGGACCGCCACTACAAGCTGGTGCACAACGAGCCGGGCTTTCTGAAGTGTACGAAATGCGAGAAGAAGTGTTTTACGCCCGGCATGTTCGTGAGCCACATGGAGACGCACGAAGATCCGGAAAAGTATAATCGTTGCAAGCGAAAGTTCGAATCGGAGGAGCAGCGCAACAAGCACGAAAAGCTGCACGTGCCCAAACCGCTGGTCAAGCGAGAAAAGGGCCCGGATCTGGAGGTGCTGGCGTTCTACAAACGCATCTACTGCGATGTGTGCGAAGAGCAAACCCCCGATTCGACCTCGTTCGAGAACTTCTGGGACCTGCGGGTGCACATGGAGCAGGAGCACAACAAGGGAGCGTACCTGAAATGCCCGATCTGCAACAAGAGGAATCTGTACCGGCAGCATCTCATCACGCATATCGATATGCACAATAATCCGGAGAAGTATCGGTGTGAGGTTTGCAAGGAAGTCTATCAAAATCTCGATTCGCACATGGTCAAAGCCCACACACCCACGACTGCGATTCCGGCGGACAGAAAGTACAAGTGTGACCAGTGCGGACGAATGTTTAACTTCCTGGCCAATTTGAAAATGCACATTGACTGTGTTCATGGCTCGAAAGACATCCGGTGCAATGTATGCAATAAGTACTTCAATCTCAAAGCGTTCCAGGTGCACAAGCGAACAGCTCACACCGACCAGATGCTGATGTGCGAACATTGTCCCAAAATGTTCAAAACACGCGGCGCGCTAGAGGTGCACAAGGGCATTCACGATGATACGCTGGTGCAGTTTACGACCTGCAAGCTCTGCAACAAGCAGATACGGCTTACCAACGTGAAGAAGCACATGACCTCGCAGCACTCCGACGATGGGCCGGTCAGCTGCGAAATGTGTGGCAAATCGTTCCGCTCCATGTTCCACATGAAGCGGCACCAGAAGAACACGTGCGAAGCGACGATCGATTCGCGCAAACACAAGTGCGAAATCTGTGGCAAGGGCTTCTGTTTGAAGCTGACGATGATCGAGCACATGACGACACACACGCGCACGAACAAGTACCAGTGTGCGTTTTGTTTTAAATCGTTCGGCTACATTTCGAATCTGTACAAGCATCGCAAGAAGGCACATCCGCTCGAATGGCAAGAGATACAGGCACGTCCGGAGGAAAATATTGCTTCGGTTATAGTTCTGAATCCCGCCAGCGAGCCTCACATCTGTATGGATTGCTGGACCACCATACACAACTTCCATCGGTACTACACCAAGCTCGAAGCCCTCCACGATCTGGACGATGGAACCACAGTCGATGAGTCGACCGCGAACGATGAGATGGGAGAGCTGAAAAATATTGAATTCCTCGAGGAAGATGCCGAGGAACTCCGGATGCAGATGAAACAGATTCCCAATGCTTCATACGATGGAAGCGATGAGCAGGAAAGCCCCAGCAGGGGCTCGGCTCTTGAGAGAAATAAGAAGTCAAACGATCATGAGTTTAGCCTTTTCGAAATTGAGGTCGAGCAGGACGGAGATGGAACGGTTTACCGGCTGGATGCATTTGAAAACCACGAACAGACGGACCGGCCCGAATCAGAAACCCGCCAGCAGCCTGTTATATTAAACGGCCAAATGAAACCGTCCAGTGCTGGGGAAAGTTCAACCGTCGCTATCGACTTCTTCGTACCGGAGGACGAACCGCCCGTCAAGCGTGGCCGAGGCCGCCCACGGAAGCAGATCAAAGTAGAACCAGACACATCGTTGCGGATCATTAAAAAAGAAAACAATTCCAGCATGGACGAGCACAACACCTCCCTGGATTCGACGGGTGGCAACGATGAGCAAGTGCCTGTTAAGCGTCGCAGAGGTCGTCCACCGAAGAATGCGAGTGTGCCGCGAAACGCCTCACCAATGGTACCCAACCCAAGGGCAATAAAGAGGGAGGTAAAAACGGAGCGGGAAGACGAGGATGCCCCGGACAGTGGTAGTGCCTCACGACCCGAACGAAGATCGACACGTGTGCGGAAGGTAAAATATTTCAGCGATATGGAGCAGGACAGCGATGAGGAGGAGGATGAGGAGGAGGAGGTAAAAGAGGAAGAAACAGAGCCGAGCGAATATGAACCTGGCGATGATCCGGAGTACGAGGCGAGGCTGCAGCTTCAACGGGAACTGAATATGGATGATTTTGCCTTCTACGAGTATCAGTGCAGTCTGGAGAACGATCACGGTGCGCGCGATAACAAGATCTTTCAGTATGTGGACGAGTTTGCGTGTCACGTCTGTGAGGAGAAAGTTACGTTCAAACGGTTTGCCGAAGCGCACTTGCACTACCGGGTGGAGCACAACCAGCCGCCGTATCTGAAGTGTCCCAGGTGTGAGAAGAAATGCCACACGCCGGGAATGTTCGTGAGTCACATGGAGACGCACGACGATCCGGAGAAGAATAAGTGCCAGATCTGCGGCAAGTACACGGACTGCAACATATCGCTGAAGAAGCACATGCGCGTGCACCAGAGCCAGCTGGAGGAGAACCTCCCGTATCCGTGCAGTTTGTGCAAGCGAAAGTTCGAGACGGAGGATCTGCGGGAGAAGCACGAGAAGCTGCACGTGCCGAAACCGCACGTACCGAAGGAGAAAGGACCCGACCACGAGGTGCTGGACTTTTACAAGGTCATCGCGTGCGATATATGCGAGGAGGAGCAGACCGACTCGCCGACGTACGACAACCTGAGCGACCTGCGCGCCCACATGGTGAAGGAGCACAACAAAAACATGTACCTGCGGTGTCCCTATTGTTCCACCAGGCAAGTCAACCGGCAACAGGTCATCACGCACATCGACATGCACAACAATCCGGACAAGTATCGATGCGAAGTCTGCAAGGAGGTGCACCAGAATCTGCATCAACACATGATGAAGGCCCATGCGCCAACTACGGCGGATGAGGCGGACAAAAAGTACAAGTGCGATCAGTGTGGAAGGTCGTTCAACTTCCTGGCGAACTTAAAGATGCACGTGGATTGCGTCCACGGCGTGAAGGATGTGAAGTGCAATGTGTGCAACAAATTCTTCAACTACAGAGCCTATCGGACGCACAAGCGTACCGCGCACACCGACCTGATGCTGATGTGCGAGCTCTGCCCAAAGATGTTCAAAAATCGAAAGTCGTTCGAAGTGCACAAAGCTTCGCACGAGGGCCTGATGCTGCGGATGACGAACTGTGTGCTGTGCGGTAAGCTCATACGCACCTGCAGCATGTCGAAGCACATGAAAACGATCCACTCGGAGGAGGACCCGGTCAATTGCGATCTGTGCGGCAAAATGTTCCGCACCACGTTCCACATGAAGCGCCATCAGAAGAACACGTGCGAGGTGACGATGGATTCGCGCTCCTTCAAGTGTGAGGTGTGCGGCAAGGGTTTCTCCACCAAGCTGACGATGATGGAACATATGACGACGCACACGCGCACCAATCAGTATCAGTGCGCGTTCTGCTTCAAATCGTTCGGCTACATCTCGAACCTGTACAAGCACCGGAAGAAGGCACACCCGCTCGAGTGGCAGGAGGTGCAGGCGCACCCGGAAGAAAACATTGCATCGGTAATCGTCGTTCGAAACTGA
- Protein Sequence
- MAHITSCALCLTAESQWFVRVFDEANTTLNMAQIISKYLWFDLKPAAQPCVCGECWSSVHDFHQFYTKLENIHCDELVAADSTEQQPPEFELPEETNQKEDQLQKSIDDGYERKHVPTVEVIDSSEKRNNSDSAANEPAKPHTQTDAMDTMDKGDKKHFVEVEDYASNDDDTGGYCPSDDNMLDGDTLNTEGRDESIDKKPTMNNVTVVAIPVEQLSVKRGRGRPPRPKLEQQSVAVDPKESPKDTSVSEETPAKRPRGRPPKRKLDISSASPNVAQKNEAPPAVIETSLVATTTEPVKRRRGRPPKNALTAVAVHSGRGRKVHSVTGNKRSTALRTKVKKEIIRGQEPTYTDSGESESENGSDYEATSAKKKPPKREKSDRDERIFKYVDEFCCHYCVENVTFKRFVDADRHYKLVHNEPGFLKCTKCEKKCFTPGMFVSHMETHEDPEKYNRCKRKFESEEQRNKHEKLHVPKPLVKREKGPDLEVLAFYKRIYCDVCEEQTPDSTSFENFWDLRVHMEQEHNKGAYLKCPICNKRNLYRQHLITHIDMHNNPEKYRCEVCKEVYQNLDSHMVKAHTPTTAIPADRKYKCDQCGRMFNFLANLKMHIDCVHGSKDIRCNVCNKYFNLKAFQVHKRTAHTDQMLMCEHCPKMFKTRGALEVHKGIHDDTLVQFTTCKLCNKQIRLTNVKKHMTSQHSDDGPVSCEMCGKSFRSMFHMKRHQKNTCEATIDSRKHKCEICGKGFCLKLTMIEHMTTHTRTNKYQCAFCFKSFGYISNLYKHRKKAHPLEWQEIQARPEENIASVIVLNPASEPHICMDCWTTIHNFHRYYTKLEALHDLDDGTTVDESTANDEMGELKNIEFLEEDAEELRMQMKQIPNASYDGSDEQESPSRGSALERNKKSNDHEFSLFEIEVEQDGDGTVYRLDAFENHEQTDRPESETRQQPVILNGQMKPSSAGESSTVAIDFFVPEDEPPVKRGRGRPRKQIKVEPDTSLRIIKKENNSSMDEHNTSLDSTGGNDEQVPVKRRRGRPPKNASVPRNASPMVPNPRAIKREVKTEREDEDAPDSGSASRPERRSTRVRKVKYFSDMEQDSDEEEDEEEEVKEEETEPSEYEPGDDPEYEARLQLQRELNMDDFAFYEYQCSLENDHGARDNKIFQYVDEFACHVCEEKVTFKRFAEAHLHYRVEHNQPPYLKCPRCEKKCHTPGMFVSHMETHDDPEKNKCQICGKYTDCNISLKKHMRVHQSQLEENLPYPCSLCKRKFETEDLREKHEKLHVPKPHVPKEKGPDHEVLDFYKVIACDICEEEQTDSPTYDNLSDLRAHMVKEHNKNMYLRCPYCSTRQVNRQQVITHIDMHNNPDKYRCEVCKEVHQNLHQHMMKAHAPTTADEADKKYKCDQCGRSFNFLANLKMHVDCVHGVKDVKCNVCNKFFNYRAYRTHKRTAHTDLMLMCELCPKMFKNRKSFEVHKASHEGLMLRMTNCVLCGKLIRTCSMSKHMKTIHSEEDPVNCDLCGKMFRTTFHMKRHQKNTCEVTMDSRSFKCEVCGKGFSTKLTMMEHMTTHTRTNQYQCAFCFKSFGYISNLYKHRKKAHPLEWQEVQAHPEENIASVIVVRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00101121;
- 90% Identity
- iTF_00095805;
- 80% Identity
- -