Apun002491.1
Basic Information
- Insect
- Anopheles punctulatus
- Gene Symbol
- -
- Assembly
- GCA_000956255.1
- Location
- JXXA01002012.1:2710-4179[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-07 0.00036 19.9 0.0 2 38 197 233 196 240 0.87 2 4 6.8e-10 1.7e-06 27.4 0.0 2 35 262 296 261 301 0.90 3 4 0.0027 6.6 6.3 0.0 23 37 334 348 319 355 0.80 4 4 7.4e-12 1.8e-08 33.7 0.1 4 39 375 410 374 413 0.94
Sequence Information
- Coding Sequence
- ATGGCCACGTTAGACTCGTCACCAAAACCCAACGTACACTGGATCGACTTTCAGCGTCACATTCGGAGCACGTTTCAAGACATCTTCGAGTGCCACCAGTACCCGGACTGCCGTTTGGTTATGGCGGACGGCGGTGAATTGTTGGCCAACCGTGCAGTTCTCGCCATGGCATCCAAGTTCTTCGAGACAATCTTCTCCGATACCTACATGGCAGATCAACCCGTGACGGTGCTAATACCGGATCTGACGCTGCTATCCGTACAACTCGTGCTACGATTTGTCTACACCGGTGTGGTCAGCCTACGACCGTACGAGGTGGCTTCGTTTATTGAGGCGTGCCATTTGCTTCACATACGTGGAATTGAGTTTATTGGGGATCGAGTTGAGGGCATACATTTCGGACAGTCGCTTCCTAATTCAGCGGGCGGGGTGGTGCAATCGATGGGGGAAAATGCGTCCACCACAGACCAGCCTTATGGGACGCATGTAACGCAAGTAGCGCAAATAGAATCCTTACCGGAAGAGGAAACTATTGAAGAAGCAGATAATGGACGAAAAAGGATTTCGTTCGATGGATTGCAAGAATACGACGAGCGTTTGAATCAAGCAATGCATGTCATTCTCAACGAAGGTACAAGCTTTCAGCAGGCTTCCGTTCAATACAACATCGATGAAAGTGTACTGCGgcaaaagaaagagaacaTGGTCGAAGTAAAAACTGATCTAGAACCACCCGAACCGGAAGCATTAAGCGTTGTGGCCATTTCCCATCCCGCCAGCTACGAAACTCGGCTAAAGGCGGCTATCGATGCGATACTGCACGACGGCCTAAGCTTCCGTGCCGCCTCCCATCGGTACAACATCGCCAAGACGGTTCTGTGgcgaaaaacgataaaactacCTCGACCCCTCACCACCCAGTCAATGGTACCACAACTCGCGGGCCGCCGCATGGAAGCGATCGATGCGCTAAAGACGGGCGAGAAGTTGGTGAGCGTTAGCCGTCGATTCGAGATTCCCCTGTCGACCTTGCACCGGGACAAGCTGCGACTATACAGCAGCGGTGTGTTGCCAGGCAAGGTGACGCTAAAGCAGCGCGACAAGGGCGAACCGTTTAAGCATCGGTTAGCGGAAGCGGCGAACGAGTGCGTTGCGGGCCGAATGTCACTGTCGGAGGCGGCTCGGGTGTACGAGCTGCCGAAAACCTCCATCTGGCGGAAGGTGCGTGGTGTGCAGGCAAACACCACCGCGTGGGAGAGCGTTAGAGATAGGGTCGAAAATTCTGCCGCTAGTCAAGAAGCCACGGTGGAAGTCAATAAATCCCCAGAGCTTTGTTACCCTTTGAACGGTGTTCATGAGATGGAGGATGTGGCGGAACAGGGGTTAGACGTTACGGCGGCGGATTTGGCACAGCTTAAGTTTCATCTGGCCACCAGCTACGAACATCACCTGATGAATGGCGGTTTATAG
- Protein Sequence
- MATLDSSPKPNVHWIDFQRHIRSTFQDIFECHQYPDCRLVMADGGELLANRAVLAMASKFFETIFSDTYMADQPVTVLIPDLTLLSVQLVLRFVYTGVVSLRPYEVASFIEACHLLHIRGIEFIGDRVEGIHFGQSLPNSAGGVVQSMGENASTTDQPYGTHVTQVAQIESLPEEETIEEADNGRKRISFDGLQEYDERLNQAMHVILNEGTSFQQASVQYNIDESVLRQKKENMVEVKTDLEPPEPEALSVVAISHPASYETRLKAAIDAILHDGLSFRAASHRYNIAKTVLWRKTIKLPRPLTTQSMVPQLAGRRMEAIDALKTGEKLVSVSRRFEIPLSTLHRDKLRLYSSGVLPGKVTLKQRDKGEPFKHRLAEAANECVAGRMSLSEAARVYELPKTSIWRKVRGVQANTTAWESVRDRVENSAASQEATVEVNKSPELCYPLNGVHEMEDVAEQGLDVTAADLAQLKFHLATSYEHHLMNGGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00106497; iTF_00103112; iTF_00102949; iTF_00100233; iTF_00100423;
- 90% Identity
- iTF_00106497;
- 80% Identity
- iTF_00106497;