Apun009579.1
Basic Information
- Insect
- Anopheles punctulatus
- Gene Symbol
- -
- Assembly
- GCA_000956255.1
- Location
- JXXA01001557.1:1-2724[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.7e-12 4.2e-09 35.7 0.0 2 39 135 173 134 177 0.90 2 4 5.5e-13 1.3e-09 37.3 0.1 2 39 189 226 188 229 0.94 3 4 8.1e-19 2e-15 56.0 0.0 3 45 245 288 243 288 0.97 4 4 5.5e-18 1.4e-14 53.3 0.0 1 43 295 338 295 339 0.96
Sequence Information
- Coding Sequence
- CAGCATCCAGAAAATCTGGtcactggtggtggtggtgctgcaggCAACGTGACACCGGGTCCCCCTAcgaacaccaacagcaacggAAATGGTGCCGGAGGTCCACAGGCGGCGGGAACCGATGATATGAAACCCAGACTGAACTTGAAGCAGGAGAACCTAAGTGATGGTACTGATCAGCATCAGTCGATGGAGGTCGAGCAAGATCAATCGTCCATGCACGGTATGGTGGTGACGCCAGAAATATCGGGTATCATGAACCAGAGTCAAATGAGCGATATGTATCAATCAGATGCTAGCGAAGACTCGAAGGTGGGCATTTTGGATGGATCTTCAATGCAGTACACAAATCTAACGAGcccgaacgaagcaaaaacgcCAACTGGGCCAAAAACGTGGACAGCTGAGGACATGGAATCGGCGCTGGAGGCACTACGTTCCCATAATATGAGCTTGACGAAGGCATCTGCAACTTACGGTATTCCATCGACGACACTGTGGCAGCGGGCGCACCGCCTCGGCATTGATACACCGAAGAAGGAGGGTCCGTCAAAAACGTGGAACGAGGATTCGCTCAACAGTGCGCTCGAAGCGCTGCGAACGGGTACGATCTCTGCCAACAAGGCATCGAAAGCGTTCGGCATTCCGTCGTCCACGTTGTACAAGATCGCTCGTCGCGAAGGCATCCGACTGGCGGCACCATTCAATGCCGCTCCCACCACTTGGTCCGCGGAGGATCTGGACCGTGCCTTGGAAGCGATCCGTGCCGGGCAAACGTCGGTACAGAAAGCGAGCACGGAGTTTGGCATTCCGACCGGTACGCTATACGGGCGTTGCAAGCGCGAAGGCATCGAACTGTCACGCTCCAATCCCACGCCCTGGTCGGAAGACGCGATGATGGAGGCCTTAGAATCAGTGAAGCAAGGACATATGTCGATCAATCAAGCCGCCATCCACTACAACCTGCCGTACAGCTCGCTGTACGGCCGGTTCAAACGGGGTAAATATGATACACCCAGCTCtggaggcggcggtggtggcagttcATCcaatgctgctgccgctg
- Protein Sequence
- QHPENLVTGGGGAAGNVTPGPPTNTNSNGNGAGGPQAAGTDDMKPRLNLKQENLSDGTDQHQSMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSMQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGSSSNAAAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104297;
- 90% Identity
- iTF_00100231;
- 80% Identity
- iTF_00100231;