Basic Information

Insect: Anopheles minimus
Gene Symbol: -
Assembly: GCA_000349025.1
Location: KB663721.1:8777549-8787988[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.9 8.3e+03 -3.4 0.0 13 30 65 82 62 83 0.78

2 13 0.00078 3.3 7.4 0.1 21 43 101 123 94 132 0.86

3 13 0.0016 7.1 6.4 0.1 23 47 131 155 129 161 0.83

4 13 0.0046 20 5.0 0.1 23 47 159 183 155 188 0.85

5 13 0.0046 20 5.0 0.1 23 48 187 212 184 217 0.85

6 13 0.0027 12 5.7 0.1 23 52 215 244 211 245 0.86

7 13 0.011 48 3.7 0.0 23 49 243 269 240 274 0.85

8 13 0.34 1.5e+03 -1.0 0.0 23 48 271 296 268 301 0.82

9 13 0.36 1.5e+03 -1.1 0.0 23 49 299 325 296 330 0.80

10 13 0.052 2.2e+02 1.6 0.0 23 52 327 356 323 358 0.86

11 13 0.015 62 3.4 0.0 23 48 355 380 351 384 0.84

12 13 0.014 60 3.4 0.0 21 45 381 404 376 410 0.88

13 13 0.00013 0.56 9.9 0.2 23 44 411 432 407 438 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.9	8.3e+03	-3.4	0.0	13	30	65	82	62	83	0.78
2	13	0.00078	3.3	7.4	0.1	21	43	101	123	94	132	0.86
3	13	0.0016	7.1	6.4	0.1	23	47	131	155	129	161	0.83
4	13	0.0046	20	5.0	0.1	23	47	159	183	155	188	0.85
5	13	0.0046	20	5.0	0.1	23	48	187	212	184	217	0.85
6	13	0.0027	12	5.7	0.1	23	52	215	244	211	245	0.86
7	13	0.011	48	3.7	0.0	23	49	243	269	240	274	0.85
8	13	0.34	1.5e+03	-1.0	0.0	23	48	271	296	268	301	0.82
9	13	0.36	1.5e+03	-1.1	0.0	23	49	299	325	296	330	0.80
10	13	0.052	2.2e+02	1.6	0.0	23	52	327	356	323	358	0.86
11	13	0.015	62	3.4	0.0	23	48	355	380	351	384	0.84
12	13	0.014	60	3.4	0.0	21	45	381	404	376	410	0.88
13	13	0.00013	0.56	9.9	0.2	23	44	411	432	407	438	0.91

Sequence Information

Coding Sequence: ATGTTCTATCCAATGcAAACCCAATTCGAGGATGGTGTAATCGAGCTAACTCGTTCCGAAATGCTCCAGCAGGATCCACTAGTAGACAATAAGCATTTCGTGGTATCGCTGTCCCTGGGCAATACGCTCATCAATCTCAACAAAATCAAGTGTCCACAATGCCGGAAGCGTTTTGATACAATGGAGGAAATGGAACAGCACCGGACCAAACATTTGACGGAGAACAAGTTTAAATGCGAGATTTGTAGTAAAGAGTTTCCCAGCCATAGTTCCATGTGGAAGCACACCAAGGCGCACACCGGTGAACGTCCTTTCGTGTGCCAGATATGCAACAAAGGTTTCACGCAATTGGCCAACCTTCAACGACATGATCTCGTCCACAACGGACTCAAACCGTTTAAGTGTCCGATTTGTGAAAAGTGTTTCACCCAACAAGCCAACATGCTAAAACATCAGCTCCTTCATACCGGACTTAAACCATACAAATGTCCCGTGTGCGAAAAAGCATTTTCGCAACATGCAAACATGGTCAAACATCAAATGCTTCATACAGGTTTGAAGCCTTACAAGTGTCCCGTTTGCGAAAAAGCATTTACGCAGCACGCCAACATGATCAAACATCAGATGTTGCATACTGGTCTTAAACCATACAAATGTCCTGTTTGCGAGAAGGCCTTCACACAGCAGGCCAACATGGTGAAACATCAAATGTTGCACACCGgtATTAAACCGTACAAGTGTCCCACCTGTGACAAAGCATTTGCCCAGCAAGCAAACATGATGAAACATCAAATGTTGCATACGGGACTAAAGCCGTACAAGTGTGGTACATGTGACAAAGCGTTTGCCCAGCAGGCCAATATGGTCAAACATCAGATGCTCCATACCGGTTTAAAACCGTACAAATGCAATACCTGTGGCAAGGCATTCGCACAGCAGGCCAACATGGTTAAACACGAGATGCTTCATACCGGAATAAAACCCTACAAATGTTCGGTTTGTGATAAAGCCTTTGCCCAGCAGGCCAACATGGTTAAACATCAGATGCTCCACAGCGGTATCAAACCGTACAAATGTCCAACTTGCGATAAAGCATTTGCTCAACAGGCAAACATGGTTAAGCATCAGATGCTCCATACGGgggaaaaaccattcaaatgcAAAAGCTGTGATAAGGCTTTCTCACAAAATGCCAATCTGAAAAAGCATGAAATGGTACATCTCGGCATACGGCCACACACCTGCCCGCTGTGTCCGAAGTCCTATTCGCAGTATTCGAACTTGAAGAAACATTTGCTGAGCCATCAGAAGCAAGCGATCAAGCAGGAGCAACAGAATGGCCAGGTGATGGCCATTCTCTACAGCTGCCAGACGTGCAAGATGCAGTTTGAGGATATCATCGAGTTTGAGCGCCACACCAGACACTGTGGCATCAGCACCGTGCAGCAACACAGTGTGAAGCTGGAAAACATTAAGAGCGAGGTTGATATCGACGGTAGCTCGAACTCGGGCATGCAGCAACATATTTCCACCACCAATGGCGGTGCAGCAAATGGGGGGAACGGTATCAGCGTCAGTCAGTCGCAACCGCCCACACCGATGCATATCCCGTCGGCCATCCTTACCTCAGTCATCTCGTCGTCGGTTGGTTCTAATGTGACCGCCCACAACCTGGCACCGGCGGCCCATTCCCATCACGGACACGATCACGGTGCGTCCGGGGATCTTCACCATCAGGTGAACTTCCACCATCCGCACATCTCGCACCTGCCGAACATATCGCACAAGATCCTTTCGCCACTGTTCCACATTCCACCGTTCAATAACAACCACAGCACATAA
Protein Sequence: MFYPMQTQFEDGVIELTRSEMLQQDPLVDNKHFVVSLSLGNTLINLNKIKCPQCRKRFDTMEEMEQHRTKHLTENKFKCEICSKEFPSHSSMWKHTKAHTGERPFVCQICNKGFTQLANLQRHDLVHNGLKPFKCPICEKCFTQQANMLKHQLLHTGLKPYKCPVCEKAFSQHANMVKHQMLHTGLKPYKCPVCEKAFTQHANMIKHQMLHTGLKPYKCPVCEKAFTQQANMVKHQMLHTGIKPYKCPTCDKAFAQQANMMKHQMLHTGLKPYKCGTCDKAFAQQANMVKHQMLHTGLKPYKCNTCGKAFAQQANMVKHEMLHTGIKPYKCSVCDKAFAQQANMVKHQMLHSGIKPYKCPTCDKAFAQQANMVKHQMLHTGEKPFKCKSCDKAFSQNANLKKHEMVHLGIRPHTCPLCPKSYSQYSNLKKHLLSHQKQAIKQEQQNGQVMAILYSCQTCKMQFEDIIEFERHTRHCGISTVQQHSVKLENIKSEVDIDGSSNSGMQQHISTTNGGAANGGNGISVSQSQPPTPMHIPSAILTSVISSSVGSNVTAHNLAPAAHSHHGHDHGASGDLHHQVNFHHPHISHLPNISHKILSPLFHIPPFNNNHST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00101359;
90% Identity: iTF_00101359;
80% Identity: iTF_00105278;