Basic Information

Insect: Anopheles minimus
Gene Symbol: -
Assembly: GCA_000349025.1
Location: KB664277.1:978751-981490[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.5e-06 8.7e-05 22.3 1.2 1 23 227 249 227 249 0.99

2 15 0.0019 0.11 12.6 3.6 1 23 258 280 258 280 0.96

3 15 1.4e-06 8.1e-05 22.4 0.2 1 23 289 311 289 311 0.98

4 15 2.4e-05 0.0013 18.6 4.4 1 23 317 339 317 339 0.98

5 15 0.014 0.77 9.9 0.1 2 23 347 368 346 368 0.97

6 15 0.00026 0.015 15.3 3.3 1 23 374 397 374 397 0.94

7 15 0.0023 0.13 12.3 6.1 1 21 403 423 403 424 0.94

8 15 0.13 7.1 6.9 5.6 3 23 432 453 430 453 0.94

9 15 6.6e-06 0.00037 20.3 0.6 1 23 496 518 496 518 0.97

10 15 0.0083 0.47 10.6 1.5 1 23 529 551 529 551 0.97

11 15 5.1e-05 0.0029 17.5 3.1 1 23 581 603 581 603 0.99

12 15 1 57 4.0 4.2 2 23 638 659 637 659 0.94

13 15 0.00099 0.056 13.5 4.9 1 23 665 687 665 687 0.98

14 15 3.5e-07 2e-05 24.3 1.5 1 23 695 717 695 717 0.99

15 15 0.00041 0.023 14.7 0.7 1 23 723 746 723 746 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.5e-06	8.7e-05	22.3	1.2	1	23	227	249	227	249	0.99
2	15	0.0019	0.11	12.6	3.6	1	23	258	280	258	280	0.96
3	15	1.4e-06	8.1e-05	22.4	0.2	1	23	289	311	289	311	0.98
4	15	2.4e-05	0.0013	18.6	4.4	1	23	317	339	317	339	0.98
5	15	0.014	0.77	9.9	0.1	2	23	347	368	346	368	0.97
6	15	0.00026	0.015	15.3	3.3	1	23	374	397	374	397	0.94
7	15	0.0023	0.13	12.3	6.1	1	21	403	423	403	424	0.94
8	15	0.13	7.1	6.9	5.6	3	23	432	453	430	453	0.94
9	15	6.6e-06	0.00037	20.3	0.6	1	23	496	518	496	518	0.97
10	15	0.0083	0.47	10.6	1.5	1	23	529	551	529	551	0.97
11	15	5.1e-05	0.0029	17.5	3.1	1	23	581	603	581	603	0.99
12	15	1	57	4.0	4.2	2	23	638	659	637	659	0.94
13	15	0.00099	0.056	13.5	4.9	1	23	665	687	665	687	0.98
14	15	3.5e-07	2e-05	24.3	1.5	1	23	695	717	695	717	0.99
15	15	0.00041	0.023	14.7	0.7	1	23	723	746	723	746	0.96

Sequence Information

Coding Sequence: ATGGAATACAACAATGCCTACAACAAACCGTACTGTGGTGTTATTTCGCAGCCAATACCACCGCCCGGCAGCTCTGGTTACTTTCCGGCAAATGACGCTGCACCGACGTTCCTTAAAGTACCCAATCCACCGTACATCAAGCAGGAGTCGGGTTCGGTGGGTGGTGATACGTTCGTTCTTGGTGGAAGTGAAACACCACCGGTAAATTACAGCCAGAACCATCACTATGGCACCGAGTACGGTGAATCTGTTACTGGGGAGAAATCTCTATTCTACCGGAAACCGTTCGAAATGCCTTATCTGTCGAATCCGTACATACAACCTCATCCGCAGCAATTTGCCCAACATCCGCTTCCGCATTTAGCATCACACCCCAACCACCATACCGTAACGCACCtgcaacaccaacagcaacaacagcttCCACCAACTACTCCGACAGTGCCATCCGATATGCATTCGCCACAGCAACTTGCCCCCGAGCATATGCAGCGTCCGCCACATCCACAAAGCTTCCACGAGTATTTTGACCATTCGGATCATTCCTCAATCGAACCGTATGCGTACGTGCTCCAAAAGCCCACCGTACCGACGTTGACCGCGGAAACACCGCCGTTTTCAGCAACCGAAGCACGATCACCGTACGAACACGATCAGCAGCCTCCCGAACCGGTCAGTTTCAAATGTGAAAACTGTCCGAAAATGTTCAATACACAAGCGAAGCTGGAAAAGCACGGCAAAACGCATGTATCAAACGACGGCCGGCGGGATTTTAAGTGTCGAATGTGTGAAAAAGCATTTCGCACCAGAAGTACACTCATCTGCCACGAAAAGGTGCACGGCGAGAACGGAGTGGACAACAGTTTTTCATGCGTAGAGTGTGGTAAAGTATTTGCAACAGCCGAAAAGCTGCAGGTTCATCGGCGTTTACACACGGGAGAAAAGCCTTACCAGTGCAAGGTGTGTCTGAAGCACTTTAACCATCAATCGAACTTGATCGTACACTCGCGCATCCACGATAAGGTGAAGAAGGCGCTGAAATGTGCCCGCTGCAGCAAGGTGCTGGACAACGAGGAACGTTTGGCGATCCATATGCGTTTGCATACCGGCGAAAAGCCGTACAAATGTTCGTACTGCGAGAAGCGCTTCAATCACAAGAGCACGGTCAGCACGCACGAGAAGGCGGCTCACATAGCGGCCAACTCGTTCAAATGCGAACGGTGCCATAAGACGTTCAATCAAAAGTGCCAGCTGCAGTATCACGAGAAGTTGCAGGAGGAACACACGATCGCGTGCACTCACTGTGAGAAGGTGTTCTGCTACAAGGCCAGCCACAAGGAGCACATGTTTAAGGTGCATTTCCCACGCccgaaaaaggaacagaaGCGGGAACAGGCCAGTGAGGAGGGAACGGGTGATGTTggagatggtggtggtgctggagCTAGTTCCAGTACTGCGAATGGGAATCAAGGAAGGAACAAGTTCAAATGCAACGTTTGCGATCGTCGGTTTTACTACAAACGTGCACTGGAAGTGCATATGGGCGTGCATGATGCATCGCTGGATGTAAACCTGCTGTACTTTTCCTGCAACTACTGTCCGGACACGTTCACCGAGGAGGAAACGCTTCACAAACACGAAGCGAAACACGTTGCCGCTGGGACGATCGATTTTCTGCAGAACATGAGGGCACTGGAGCAGTCGGAAAACCCTGCCAACGGGCAAGTTGATGGTGGGTTTCGGTGTCCGCTATGCTTTAAGCGTTTCGAGGATCAACCGACATTGCGCGATCATCACAAAACGCACCTTTGCTCGAACCCGGACTGCACCAAGTGTGAGGCAGCGCGTGGCGCTGAGTTCGATCTGAGCCGCAGTACGTACAATGCGAACGATGACATGCGTGAAACGGTGTGCAACGTTTGCCACCGCCAATTGCCAACGTTCGAGCAGTTCCAGAACCACTTCCATTACCATACGTCGCGCGTACCGTTCTACTGCTATCACTGTCGGGAGGAGTTTACCGACAAGCGGGAACTTTATAACCACTCGCGGACGCATACACCACGCGAACCGGAATCGTATACGTGCGAGGTATGCGCGAAGGTGTTCTCGACCAAGGGCAATTTTAAGCGGCATTTGAAATCTCACGAAGCGGTCCGCGCGTTCGCGTGCGATCGCTGCTCCAAGCAGTACGACTACAAGAGCGCACTGGAGGTGCATCTGAAGCGATCCCACGGTATCGAGCTGTAG
Protein Sequence: MEYNNAYNKPYCGVISQPIPPPGSSGYFPANDAAPTFLKVPNPPYIKQESGSVGGDTFVLGGSETPPVNYSQNHHYGTEYGESVTGEKSLFYRKPFEMPYLSNPYIQPHPQQFAQHPLPHLASHPNHHTVTHLQHQQQQQLPPTTPTVPSDMHSPQQLAPEHMQRPPHPQSFHEYFDHSDHSSIEPYAYVLQKPTVPTLTAETPPFSATEARSPYEHDQQPPEPVSFKCENCPKMFNTQAKLEKHGKTHVSNDGRRDFKCRMCEKAFRTRSTLICHEKVHGENGVDNSFSCVECGKVFATAEKLQVHRRLHTGEKPYQCKVCLKHFNHQSNLIVHSRIHDKVKKALKCARCSKVLDNEERLAIHMRLHTGEKPYKCSYCEKRFNHKSTVSTHEKAAHIAANSFKCERCHKTFNQKCQLQYHEKLQEEHTIACTHCEKVFCYKASHKEHMFKVHFPRPKKEQKREQASEEGTGDVGDGGGAGASSSTANGNQGRNKFKCNVCDRRFYYKRALEVHMGVHDASLDVNLLYFSCNYCPDTFTEEETLHKHEAKHVAAGTIDFLQNMRALEQSENPANGQVDGGFRCPLCFKRFEDQPTLRDHHKTHLCSNPDCTKCEAARGAEFDLSRSTYNANDDMRETVCNVCHRQLPTFEQFQNHFHYHTSRVPFYCYHCREEFTDKRELYNHSRTHTPREPESYTCEVCAKVFSTKGNFKRHLKSHEAVRAFACDRCSKQYDYKSALEVHLKRSHGIEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00097923; iTF_00101819;
90% Identity: -
80% Identity: -