Amin006262.1
Basic Information
- Insect
- Anopheles minimus
- Gene Symbol
- PAXBP1
- Assembly
- GCA_000349025.1
- Location
- KB663610.1:16348246-16353394[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-37 5.3e-33 114.3 0.3 3 271 676 884 674 886 0.94 2 2 0.79 5.1e+03 -3.7 0.0 156 182 920 953 913 960 0.59
Sequence Information
- Coding Sequence
- ATGTCGCTTTTCcggaaaccaaaaaaacctATCCAGCGACGCGTTTTCAGCGGCtacgatgatgaggatgaagaAAACCACAACGCAACCGGGAAGGATCCGGGCCCACACAGCAACGGGAATGATAATGGCAGCGACAGCAATCGACCCGTGCCGATGGACACTGATCCCGCACCGGAAGGTCCGGCGGTAGCGGTGGTACCGACCGGGTCAGAACACCGCAAGCGAAAAGAACACCGTTCGGAATCGTCCGCTAAGGGCTCGTTGAAAGCGATTCCGAGCACCAAACCCTCTTTGCTTAGTTTCGACGACGaagAGGAGGGCGAAGTTTTCCAAGTGAAAAAGTCCTCCCACAGCAAGAAGGTGATGAAAACGCTCGACAAGGAACGGCGCCGGAAACGACACATGGAGAAGAGCAACGGCACAcagacgacaacgacgacaacaGCCCATAGCGGATATGGCATGGAGCAGGGCAAATCGAACGCCTCACGCAAGCAGCAGTACCTTTCGTCTTCGTCGCCACCTTCGGTCACGGGGTCGTACGGCCACGAGAATAATGATaagataaaaagagaaaagtgtgaaaattcTAGCTCTAATATCCAAACAGAAATACGCACAGACGACTTTGTGCTGGTGGTCAAGAAGTCGGACCCTGAGAATATGATTCTAAACGGTCGGGCTGCCCTGTGTGCCGGGCGGAACGATATGTCTTCGGAGGATGAAGCGAACGAGGAGGATGAATCCGATGGCCGGatgcatcatcaccatcggttTGCGAAACCGCAGGACAACTTTAAGATGTGTCTCGAGAACGGTGTTATACCGGATGCGGCCATGATTCATGCCGCCCGCAAGCGACGCCAGAAAGCTCGCGAACAAGGTGAATTTATTCCAGTAGAGGAAccgaaggaggaaaagaataaaaagcgCACCGTACAAGAGGACGGAGACGGTGATGGATCGGATGAGGATGACGATCGCATCGATATGTCGGCTATAACCGGTGCCAAAGAGCGTGAAGAACGACGGGAACAGTTTTATGCCGTGCAGCGCGAAGATTCAGACGCGGAAGATTCCGATGTGGAAACGAAGGAGtgggaaaatcaacaaatccGCAAGGGTGTGACCGGAGCTCAGCTAGTTTCGGCACAGCAAGAATCCGTAATATCACAGTACTTAATAGGCAGCAGCTTCAGTCAAACGTTCCAAAACAAATCAGCCCTGCTGATGGAAGATCAACGGGCCGGCGATGTGAGCAATGAGCTGCGTGGTCTTTCAACGGCTGCCCTGCTCGAGAAAGCTTACGCAGCGACCAGTGGCATCCGGCTGTCTGCCACTGGTAATAAGCGAACGAATACATCCGgcagtggtagtggtggaATTACTAAAACAACAGACACGAAACCAACCGGTCCGCGTATGCCACAGCAGATTTTGGCCCAGCTAACAGATCGACACCGCACAACGGTGGAGTTGAACCGGAAACACGATGACGACATCAAACAAATTACGCAACAAATCAAACTGCTCCAGATGGATCACTTGTCGTGCGAACAGAAGGCTCCAGTTGCTGCGGCCAAGTATCGGTTTTATCAAGAGTTTCGCTGCTATGTGTCGGATTTGATCGAGTGTTTAAACGAAAAAGTACCGCTGGCGACGACGCTCGAGCAGAAGGCACTCTCCTTGCTGGGGAAACATTCGGGAATGCTTATCGAACGACGTCGTCAGGATATGCGCGACCAAGTGAAGGAAGTCTCCGACGCAAACAAAGGAATCAAGCGAGTTGGCCAAGAGGAACAGGAACGCGTTAGGCGTGCAGCTGAAAGGGAAGGACGTCGTACACGTCGTCGACGGGATCGCGAGAAGAATGAAACGGCCGAGAGTCACTACGATGGCATGTCCAGTGATGATGAAATCCCAGACATGGAAGCAGCCCGCTATCGTTCCGCACTGCAAGCGATCGAGCTGGAAGCGCGGGAGGTGTTTGTCGACGCAGCGGAAGAGTACGGCGAGGTGGCCGGTATTCTGGAGCGGTTCGAGCAGTGGCGCCAGCACGATATGCCCGCGTACAGTGACGCCTATGTAAGCCTTTGCCTGCCGAAGATCTTAGCTCCACTGATCCGTCTCGAGCACGTCTGCTGGAACCCGCTCACGATGGATGCGTTGGTGGAGCTGGAGAATGAAAAGTGGTACCGGACGGTCGCTCAGTACGGTTGCTCGGCCACGACGGAGGCGGCGTTGGCAGCGGATCCAGACGTTCGGCTTATACCGACGCTGGTGGAGAAAATATTCCTGCCAAAGCTGACGGCACTGGTCGAACAGTACTGGGATCCGCTGTCCACGACGCAAACGTTCCGGTTGGTGCGATTGCTGAAGCGATTCGTGCGCGATTATCCATCGCTGAAGATCACGTGCAAACCACTCCGGGTGCTCTTCCAAGCTATTCTCGACAAGCTGAAGCAGTCGATCGATAACGACGTGTTTATTCCAATCTTTCCCAAACAAGCGCAAGAGGCAAAGTCATCCTTCTTTCAGCGACAGTTTTGTAGCGGTTTGAAGCTACTGCGCAACATCACCAGCTGGCAAGGTATTTTGGCCGATACAGCACTAAAAGAGCTCGCGATCGGATCGCTACTGAACCGATATCTGCTGAACGGGATGCGCGTCTGTTCGCCGGTGGATGCGATCGCGAAAGCCTCCACCATTGTGTACACATTGCCACGTGTCTGGCTCAACTCGAGCGCGACCGTCGTGCAGAGTATGGATCAGTTTGTCAATATGTTACAACATTTGCAATCTCAACTAGATCCTGCCCTTCCACAAAATGGAGAACTAGCCGAACAGATACGCAAAATTCTAACAAGTTTGCACGTGGTTTCAACGTCTTCATCGGTAATGAACTAA
- Protein Sequence
- MSLFRKPKKPIQRRVFSGYDDEDEENHNATGKDPGPHSNGNDNGSDSNRPVPMDTDPAPEGPAVAVVPTGSEHRKRKEHRSESSAKGSLKAIPSTKPSLLSFDDEEEGEVFQVKKSSHSKKVMKTLDKERRRKRHMEKSNGTQTTTTTTAHSGYGMEQGKSNASRKQQYLSSSSPPSVTGSYGHENNDKIKREKCENSSSNIQTEIRTDDFVLVVKKSDPENMILNGRAALCAGRNDMSSEDEANEEDESDGRMHHHHRFAKPQDNFKMCLENGVIPDAAMIHAARKRRQKAREQGEFIPVEEPKEEKNKKRTVQEDGDGDGSDEDDDRIDMSAITGAKEREERREQFYAVQREDSDAEDSDVETKEWENQQIRKGVTGAQLVSAQQESVISQYLIGSSFSQTFQNKSALLMEDQRAGDVSNELRGLSTAALLEKAYAATSGIRLSATGNKRTNTSGSGSGGITKTTDTKPTGPRMPQQILAQLTDRHRTTVELNRKHDDDIKQITQQIKLLQMDHLSCEQKAPVAAAKYRFYQEFRCYVSDLIECLNEKVPLATTLEQKALSLLGKHSGMLIERRRQDMRDQVKEVSDANKGIKRVGQEEQERVRRAAEREGRRTRRRRDREKNETAESHYDGMSSDDEIPDMEAARYRSALQAIELEAREVFVDAAEEYGEVAGILERFEQWRQHDMPAYSDAYVSLCLPKILAPLIRLEHVCWNPLTMDALVELENEKWYRTVAQYGCSATTEAALAADPDVRLIPTLVEKIFLPKLTALVEQYWDPLSTTQTFRLVRLLKRFVRDYPSLKITCKPLRVLFQAILDKLKQSIDNDVFIPIFPKQAQEAKSSFFQRQFCSGLKLLRNITSWQGILADTALKELAIGSLLNRYLLNGMRVCSPVDAIAKASTIVYTLPRVWLNSSATVVQSMDQFVNMLQHLQSQLDPALPQNGELAEQIRKILTSLHVVSTSSSVMN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108386;
- 90% Identity
- iTF_00101671;
- 80% Identity
- -