Afun006353.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- PAXBP1
- Assembly
- None
- Location
- Contig1:6503546-6508751[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-36 8.7e-33 113.8 0.3 3 271 675 883 673 885 0.93 2 2 0.4 3e+03 -2.7 0.0 154 182 917 952 910 965 0.61
Sequence Information
- Coding Sequence
- ATGTCGCTGTTCCGGAAACCAAAAAAACCAATCCAGCGACGCGTTTTCAGCGGCTACGATGATGAGGATGAAGAAAACCACAACGCATCCGGCAAATCGGATAATGGCCCGCACAGTGTCAGTAATGGCAGTGATAATGGCAGCGACATCAACCGACCAGTACCGATGGAGCTCGATCCCGCACCGGAAGGTCCGGTGGTAGCGGTCGTACCGACCGGGTCAGAACACCGCAAGCGAAAAGAACACCGTGCGGAATCTTCCTCTAAGGGCTCGTTGAAAGCGATTCCGAGCACCAAACCCTCTTTGCTTAGTTTCGACGACGAAGAGGAAGGCGAAGTTTTCCAAGTGAAAAAGTCCTCCCACAGCAAGAAGGTGATGAAAACGCTCGACAAGGAACGGCGCCGGAAACGACATTTGGAGAAGAACAATGGCACACAGGCAGCAACGGCCCAGACCGGATATGGTGCGGAGCAGGGCAAATCGAATGCCTCGCGCAAACAGCAGTACCTTCCGTCTTCGACGCCACCATCGGTCACGGGGTCGTCGTACGGCAACGACAGTAATGATAAGATAAAAAGAGAAAAGTGTGAAAATTCTAGCTCTAATATCCAAACAGAAATACGCACAGACGACTTTGTGCTGGTGGTTAAAAAGTCGGACCCTGAAAATATGATTCTGAACGGTCGGGCAGCCCTGTGTGCCGGACGGAACGATATGTCCTCGGAGGATGAACCGCACGAGGAGGATGAATCCGACGGTCGGATGCAACATCACCATCGGTTTGCGAAACCGCAGGACAACTTTAAGATGTGTCTCGAAAACGGTGTTATACCGGACGCGGCTATGATTCATGCCGCTCGCAAGCGGCGCCAGAAAGCACGCGAGCAAGGTGAATTTATTCCAGTCGAGGAACCGAAGGAAGATAAGAATAAAAAACGCACCGTACAAGAGGATGGTGACGGTGACGGATCGGATGAGGATGATGATCGTATCGATATGTCGGCTATAACCGGTGCCAAAGAGCGTGAAGAACGACGGGAACAGTTTTATGCCGTACAGCGCGAAGATTCCGATGCGGAAGATTCCGATGTGGAAACGAAGGAATGGGAAAATCAACAAATACGCAAGGGAGTTACCGGTGCTCAGCTAGTTTCGGCGCAGCAAGAATCCGTTATATCACAGTACTTAATTGGTAGCAACTTCAGTCAAACGTTCCAAAACAAATCGGCCCTGCTGATGGATGATCAACGGGTTGGCAATGTGAGCAGTGAGTTGCGTGGCCTTTCAACGGCTGCCCTGCTCGAGAAAGCTTACGCAGCGACCAGTGCTGTCCGGTTGTCTGGTAGTGGTAGTAGGCGAACGAATGCATCAGGCAGTGGTGGTATGACCAAAACAACAGACACGAAACCGACCGGTCCGCGGATGCCGCAGCAGATTCTTGCACAGCTGACCGAACGGCACCGCACGACGTCGGAGTTGAACCGGAAACATGACGAAGATATCAAACAAATCACGCAAGAAATCAAATTACTCCAGATGGATCACCTGTCGTGTGAGCAAAAGGCTCCGGTTGCTGCGGCCAAGTATCGGTTTTATCAGGAATTTCGCTGCTATGTGTCGGATTTGATCGAATGTCTGAATGAAAAGGTACCGCTGGTGACAGCACTCGAACAGAAGGCACTCACCTTGCTGGGCAAACATTCGGGAATGCTCATTGAACGTCGTCGTCAGGATATGCGTGACCAGGTGAAGGAAGTATCCGACGCAAATAAAGGGGTCAAGCGAGTTGGTCCAGAGGAACAGGAACGGATTCGGCGAGCAGCTGAACGGGAGGGACGTCGTACACGTCGCCGACGGGATCGCGAAAAGAATGAAACAGCGGAGAGTCATTTCGACGGCATGTCCAGTGATGACGAAATCCCAGACATGGAAGCAGCCCGCTATCGTTCCGCCCTGCAAGCGATCGAGCTGGAAGCGAGAGAAGTGTTTGTAGATGCGGCAGAAGAGTACGGTGAGGTAGCCGGTATTCTGGAGCGGTTCGAGCAGTGGCGCCAGCACGATATGCCCGCGTACAGTGACGCCTATGTGAGCCTTTGCCTGCCAAAGATCTTAGCACCGCTGATACGGCTCGAACACGTCTGTTGGAACCCGCTAACGATGGATGCCTTGGTGGAGCTGGAGAATGAAAAGTGGTACCGCACGGTCGCTCAGTACGGATGCTCGGCCACGACGGAGGCGACGCTGGCTGCGGATCCAGATGTTCGGCTAATACCGACGCTGGTAGAGAAAATATTCATACCAAAGCTGACGGCACTGGTCGAACAGTATTGGGATCCGCTGTCCACGACGCAAACGTTCCGGTTGGTTCGATTACTGAAGCGGTTCGTGCGCGATTATCCATCGCTAAAGATCACGTGCAAACCGCTCCGAGTGCTCTTCCAAGCAATTCTCGATAAGCTGAAGCAGTCGATCGACAACGACGTGTTTATTCCAATCTTTCCCAAACAAGCGCAAGAGGCAAAGTCGTCCTTCTTTCAGCGTCAGTTCTGTAGCGGTTTAAAGCTACTGCGTAACATCACCAGCTGGCAAGGCATTCTGGCCGACGCAGCACTCAAGGAGCTCGCGATTGGATCGCTGCTGAATCGATACCTGCTGAATGGTATGCGCGTCTGCTCACCGGTGGATGCGATCGCGAAAGCTTCCACCATCGTGTACACATTGCCGCGTGTCTGGCTCAACTCGAGCACATCCGTCGTGCAGAACATGGATCAGTTTGTCAGTATGCTGCAACATTTGCAATCTCAACTAGATCCTGCCCTTCCACAAAATGGGGAACTAGCCGAACAGATACGTAAAATTCTAACAAGTTTGCACGTGGTTTCAACGGCTTCGTCGGTATTGAACTAA
- Protein Sequence
- MSLFRKPKKPIQRRVFSGYDDEDEENHNASGKSDNGPHSVSNGSDNGSDINRPVPMELDPAPEGPVVAVVPTGSEHRKRKEHRAESSSKGSLKAIPSTKPSLLSFDDEEEGEVFQVKKSSHSKKVMKTLDKERRRKRHLEKNNGTQAATAQTGYGAEQGKSNASRKQQYLPSSTPPSVTGSSYGNDSNDKIKREKCENSSSNIQTEIRTDDFVLVVKKSDPENMILNGRAALCAGRNDMSSEDEPHEEDESDGRMQHHHRFAKPQDNFKMCLENGVIPDAAMIHAARKRRQKAREQGEFIPVEEPKEDKNKKRTVQEDGDGDGSDEDDDRIDMSAITGAKEREERREQFYAVQREDSDAEDSDVETKEWENQQIRKGVTGAQLVSAQQESVISQYLIGSNFSQTFQNKSALLMDDQRVGNVSSELRGLSTAALLEKAYAATSAVRLSGSGSRRTNASGSGGMTKTTDTKPTGPRMPQQILAQLTERHRTTSELNRKHDEDIKQITQEIKLLQMDHLSCEQKAPVAAAKYRFYQEFRCYVSDLIECLNEKVPLVTALEQKALTLLGKHSGMLIERRRQDMRDQVKEVSDANKGVKRVGPEEQERIRRAAEREGRRTRRRRDREKNETAESHFDGMSSDDEIPDMEAARYRSALQAIELEAREVFVDAAEEYGEVAGILERFEQWRQHDMPAYSDAYVSLCLPKILAPLIRLEHVCWNPLTMDALVELENEKWYRTVAQYGCSATTEATLAADPDVRLIPTLVEKIFIPKLTALVEQYWDPLSTTQTFRLVRLLKRFVRDYPSLKITCKPLRVLFQAILDKLKQSIDNDVFIPIFPKQAQEAKSSFFQRQFCSGLKLLRNITSWQGILADAALKELAIGSLLNRYLLNGMRVCSPVDAIAKASTIVYTLPRVWLNSSTSVVQNMDQFVSMLQHLQSQLDPALPQNGELAEQIRKILTSLHVVSTASSVLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108386;
- 90% Identity
- iTF_00105134;
- 80% Identity
- -