Amin012707.1
Basic Information
- Insect
- Anopheles minimus
- Gene Symbol
- retn
- Assembly
- GCA_000349025.1
- Location
- KB663655.1:516811-613725[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-25 2.6e-22 78.5 0.0 2 89 283 368 282 368 0.96 2 2 1.4 2.5e+03 -1.5 1.4 8 57 702 752 698 774 0.58
Sequence Information
- Coding Sequence
- ATGGATGCGAGCGTTTGCATCAAACCGGAACGGGACACTGACTCCGACCTGGGAGATGATTCGCCTCTGTCCAACACTGCAGACGAGCATTCCGATCACGAGACGGATCTAGGCCGGGACGGAGAGTCAAGTGACGAGGGCGTTAATGTGAATCGCCCGTCCCCGGACGCAAAGATGACATCCGGCATGGAATTTGGCAGAAGTCCAGACCATCACTCGGAGATAAGCCaagcgacagcagcagcagcggccgcAGCGGCAGCAGCCGCCGCCCAGTTTGGTGCAAACCATCCACTGGGAGTGCTTAGCAATTTGACGGCCCTGAACATGAACATGCCAGGACTGTCCGGATTGGCGTCCGGGCTTGCATCAGGCCACCATGGCGATGTGCTCGAGAAGCTGAAGATGCAGGTGCGTGACATGAAGGTGGGAGCGCTGATGGGTGAACAAATGGCGGCTGACTTTGCAGCACTTCATGCGGCTTCATCGCCATTCGGTGCAGCTCTGGCAGCCAGTGCCGCCAATGGTGCTGCCAACGGAATGGGGATGTTCGGTAACGGTAGGGAAGAACCTCGTGGTGGAAGCGGTAGTTCTGGTGGAATGAACGtcggtagtggtggtggatcTAGTGGAGTAGGAGGCTCACAATCGCAAACAGGATCACAGAATGGTGGGAACTTTTCTTTCACCCTACCGAACGCACCGATCAGCAAGGATgGCAATCCCGGTTCCAATTCGTCAACCTCGAGCGAAACGTCGAACTCGtcccaacaaaacaacggcTGGAGCTTCGAGGAGCAATTCAAACAAGTACGACAGCTGTACGAAATCAACGATGACCCGAAGCGTAAGGAATTTCTGGACGATCTGTTCCTGTTCATGCAAAAGCGAGgtACTCCTATCAATCGCTTGCCGATTATGGCCAAATCGGTGCTGGACTTGTACGAGCTATACAACTTGGTTATTGCACGTGGAGGTCTCGTCGATGTTATTAACAAAAAGCTATGGCAGGAAATCATCAAAGGACTGCATCTCCCTTCCAGCATTACCAGCGCAGCATTTACGCTACGGACACAGTATATGAAGTATCTCTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCAGAGCTGCAGGCGGCCATCGATGGAAACCGGCGCGAGGGTCGTCGCTCTAGCTATGGCCAGTTTGATTCGCCATCCGTTCAACGCTCGCCGATTCCGCAGGGTATTTCACAGATGCCGCCCCTTTCGCTGGTGTCACACgtcaaccagcagcagcaccatcaccgGCTGCTACCGCCGGTCGCCCAAATACCGAATATGTTGCCGGCCGAGTTTGAGCAACGCATGCTTAACTACATCAAGATGTTCCAGCCGAAGGAGATGGGTCGTGCGCAAAGCCCGGATAAACTGTCCGCCCTGAATGCGATCGACATATCGCGCGTGGCGCTCTGGAATATGTACAACCCGAGCCCGAACAGTCCACCGAACTCGCTCAACACTAGCCCGGAAAATAATATGCAAAGCGCTCTCGATCTTTCCGAATCACCGGATCACGCAATGTCGATGATCAAGCGAGATCGGGATAATCCGGTAGATTTTAGTGATCCGCGAGACTATGGCAATGGGCTGGGACCGCCGGCCAAACGTagccaccaccatcaccattcgCATCACAACCGGTCGCTAACGCCACAGAAGCTAAACAGTTCCTCGCACGATGAAGATGACGCCCGGTCCGACAGCACCCCGATCAACCTGCGCGAGAATGGTATGCATGGCCGACGCCCCACACTGGACGATGACGGTGATGACGAGGAGGACGAAATGGAGGACGAAACAACCGAGGAAGACCTGCTGCGTGCGcaatttgctgctgctgccgctgccgcaGCCGTTAACCAGCACCCGCTCGCACTCAGCCTTGCCGATCATCAtctacagcaacagcagcagcatcaacagcagcatcgtGAACGGGAACGTGCCCAACAGCAGGTTGCCGCTCAGCgtgaacaacagcaacaacacaatcTGGCAACACTGGACCTAAGCATACTGGATCGCGAGCGGCTACGTTGTGATAGTGCTGACAAGCTGAAGCGTCAgtgccaacaacaacaacagcagcagcagcagcagcaaaatcaacaacaccaacaactgTTGGATCAGCATCACCTTCACCAAAGGCAACtacagcaccagcagcaatcGCGTGTCGCCCGGGAACTCCAAAAGCATGAGAATGGTGACCGGCTCAGTCTCACACCGGACAGTGAGTTGCACCATTCGAAGAATAATCTGTCTACGAGCGGTGGTGGAACTGGCACGGGGCTAACCGATCCGTTTAGCTCGCCGCTCGGCATTTCCGGCATGCAGTTCAAGCTGATCAGTCGGGgTGACGCTAGCAAGGGCGACCAAAAGCTCGTCGTGACGATGGAGTTCAACGGCGTTCAGTACGAAGGTGTCCTGTTTGCCAATCCGCTATCCTCCACCACCTTATCCGCACCGACATCAACGCCACCCTCCTCGTCCGTATCGGCTACCTCGGCTTCCCCGATCGGTTCTATGGTATCGCCGGTCAAATCCAGTGCCGCTCTCATCTCACCATTGGATGATCGTGATGCGGCCTCTACTACAACCAACACCGTAGACATCCCGATGGTCCCCGCCTCGAACGGTAGTGCCACGAGCggcaccaccactaccaccaacTCCATCGGCAATAGCAATCTCGTGGCCAGCAGCAATGCTGCTGCCGTCGCTTCCAACACCTGcatccagcaacagcagcaggataGTGTGATTCCGGTGGGTGGTGCAATCAGCCCGGCAAGATCGATGGTTTGA
- Protein Sequence
- MDASVCIKPERDTDSDLGDDSPLSNTADEHSDHETDLGRDGESSDEGVNVNRPSPDAKMTSGMEFGRSPDHHSEISQATAAAAAAAAAAAAQFGANHPLGVLSNLTALNMNMPGLSGLASGLASGHHGDVLEKLKMQVRDMKVGALMGEQMAADFAALHAASSPFGAALAASAANGAANGMGMFGNGREEPRGGSGSSGGMNVGSGGGSSGVGGSQSQTGSQNGGNFSFTLPNAPISKDGNPGSNSSTSSETSNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDSPSVQRSPIPQGISQMPPLSLVSHVNQQQHHHRLLPPVAQIPNMLPAEFEQRMLNYIKMFQPKEMGRAQSPDKLSALNAIDISRVALWNMYNPSPNSPPNSLNTSPENNMQSALDLSESPDHAMSMIKRDRDNPVDFSDPRDYGNGLGPPAKRSHHHHHSHHNRSLTPQKLNSSSHDEDDARSDSTPINLRENGMHGRRPTLDDDGDDEEDEMEDETTEEDLLRAQFAAAAAAAAVNQHPLALSLADHHLQQQQQHQQQHRERERAQQQVAAQREQQQQHNLATLDLSILDRERLRCDSADKLKRQCQQQQQQQQQQQNQQHQQLLDQHHLHQRQLQHQQQSRVARELQKHENGDRLSLTPDSELHHSKNNLSTSGGGTGTGLTDPFSSPLGISGMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFANPLSSTTLSAPTSTPPSSSVSATSASPIGSMVSPVKSSAALISPLDDRDAASTTTNTVDIPMVPASNGSATSGTTTTTNSIGNSNLVASSNAAAVASNTCIQQQQQDSVIPVGGAISPARSMV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00101477; iTF_00093256; iTF_00102165;
- 90% Identity
- iTF_00101477;
- 80% Identity
- -