Aara003845.1
Basic Information
- Insect
- Anopheles arabiensis
- Gene Symbol
- retn
- Assembly
- GCA_016920715.1
- Location
- NC:73851914-73953753[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-25 2.6e-22 78.5 0.0 2 89 307 392 306 392 0.96 2 2 2.1 3.7e+03 -2.2 0.4 25 39 750 764 732 800 0.56
Sequence Information
- Coding Sequence
- ATGGAGCCAAGTGTTTGCCGGACAGAACGGGACACTGACTCCGACCTTGGCGATGATTCACCGttgTCCCACACGGCAGACGAACACTCCGATCGCGAGACGGATCCCGGCCGGGACGGTGAGTCGAGCGACGAGGGCGTTAATGTGAATCGCCCGTCGCCGGACGCAAAGATGACATCCGGCATGGAGTTTGGCAGAAGTCCAGACCATCACTCGGAGCTAAGCCAGGCAACGGccgctgcagcagcggcagccgcagcagcagccgcagccgccCAGTTCGGGGCCAACCATCCGCTGGGCGTGCTGAGCAATCTGACGGCGCTCAACATGAACGTACCGGGGCTGTCCGGGCTGGCGTCGGGGCTGGCTGCGGGACACCATGGGGACGTGCTCGAAAAGCTGAAAATGCAGGTGCGCGACATGAAGGTGGGCGCACTGATGGGCGAACAAATGGCGGCTGACTTTGCGGCGCTCCATGCTGCCTCGTCGCCGTTCGGGGCCGCTCTCGCCGCCAGCACTGCCAACGGAGCCGGCAACGGCATGGGCATGTTCGGTTCCGGTAGAGATGATGCACGGGGTGGAAGTGGTGGGAGTGGTTCTAGTGGTGGTTCTATGAATGTTGGCAgcggcggaggaggaggaggtggagctGCTGGAGGAGGTTCACAAGCGCAGACGGGGCCACAGAATGGGAGCAATTTTTCCTTCACCCTTCCGAATGCACCGATCAGCAAGGATGGCAATCCCGGTTCCAATTCGTCAACCTCGAGTGAAACGTCGAACTCgtcgcaacaaaacaacggcTGGAGCTTCGAGGAGCAATTCAAACAAGTACGACAGGTAAGCCACCAACACAAAGCGCTAAATCGGAACAGTGTATGGCTAACACTATACGAAATCAACGATGACCCGAAGCGGAAGGAATTTCTGGACGATCTGTTCCTGTTCATGCAAAAGCGAGGCACTCCCATCAACCGTTTGCCGATCATGGCCAAATCGGTGCTGGATCTGTACGAGCTGTACAACCTCGTTATCGCACGCGGAGGGCTTGTCGACGTTATCAACAAAAAGCTGTGGCAAGAAATCATCAAAGGACTGCATCTACCTTCCAGCATCACCAGCGCTGCATTTACCCTACGAACACAGTACATGAAGTATCTCTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCAGAACTGCAGGCGGCCATCGATGGAAACCGGCGCGAGGGTCGTCGCTCTAGCTATGGCCAGTTTGATTCGCCCTCAGTGCAACGTTCGCCGATTCCGCAAGGCATTTCCCAGATGCCGCCCCTGTCGCTGGTGTCGCACgtcaaccagcagcagcaccatcaccggctgctgccaccggtcgGCCAAATACCGAACATGCTGCCGGCCGAGTTCGAGCAGCGCATGCTGAACTACATCAAGATGTTCCAGCCGAAGGAGATGGGCCGCTCGCAGAGCCCGGACAAGCTGTCCGCCCTGAACGCGATCGACATTTCGCGCGTCGCCCTGTGGAACATGTACAACCCCAGCCCGAACAGTCCACCGAACTCGCTCAACACTAGCCCGGAAAACAACATGCAAAGTGCTCTCGATCTGTCGGAATCGCCCGATCATGCAATGGCAGCGATCAAACGTGAACGGGACCATCCGGTCGACTTTAGCGATCCGCGTGACTACGGCAACGGGCTGGGACCGCCGGCCAAGCGcagccaccatcatcaccactcGCACCATCACAACCGCTCGCTAACGCCCCAGAAGCTAAACAGTTCCTCGCAGGACGAAGATGACGCCCGGTCGGACAGTACACCGGTCAACCTGCGCGAGAATGGATCGCACGGCCGTCGTGCCACGCTTGATGACGACGGTGACGACGAGGAAGACGAAATGGAGGACGAAACGACCGACGAGGACATGCTGCGGGCATCGTTtgctgcggccgccgccgccgctgccgtcaACCAGCACCCGCTCGCGCTCAGCCTTGCAGATCACCAtcttcaacagcagcagcagcagcaacaacaacagcagcagcagcaacgtgaGCGAGAACGTATTCAGCAGCAAGTGGCcgcccagcaacagcagcagcagcagcgcgaacAGCAACACAGTCTCGCCACGCTCGATCTGAGCATACTGGACCGCGAGCGGCTACGCTGTGACAGTGCCGACAAGCTGAAGCGCCAAagccaacaacagcagcaacagcagcaacagcaacaacagcagcagctgttggATCAGCATCATCTGCACCAAAGGCAattgcagcaccagcagcaggcgcGTGTTGCGCGCGAACTGCGCAAGCACGAGAACGGCGATCGGCTCAGCCTGACGCCGGACAGCAGCGAGCTGCTGCACCACTCGAAGAATCATCTATCGAcgagcggtggcggtggtggagccGGTAGCGATCCGTTCAGCTCTCCGCTTGGCATTACCGGCATGCAGTTTAAGCTGATCAGTCGAGGCGACGCTAGCAAAGGCGACCAGAAGCTGGTGGTCACGATGGAGTTCAATGGCGTCCAGTACGAGGGTGTCCTGTTCGCGAACCCGCTCTCCTCCGCCAACCTGTCAGCGCCGCCGGCCTCGACGCCGCCCTCCTCGTCCGTGTCGGCTACTTCGGCCTCCCCGATCGGTTCCATGGTATCGCCGGTCAAATCGAGTGCCGCCGCCCACATCGCGTCACCCCTCGACGAGCGTGATTCGTCCGCGTCCGCGAACATTGACGTGGCGGCGATGGGCAGTGCACTGGCAGCAACCGCAACCGTGACCAGCAACGCCAGCAGTAATGCCACCTGCATCCAGCAGCAACCACTGGACGGTGCAGTAACGCCACCAGCAGCCCTCTCGATCACTGCACCTTCGGTTGGTGCCTCAAGCCCTGCCAGGTCGTTAGTTTCATAG
- Protein Sequence
- MEPSVCRTERDTDSDLGDDSPLSHTADEHSDRETDPGRDGESSDEGVNVNRPSPDAKMTSGMEFGRSPDHHSELSQATAAAAAAAAAAAAAAQFGANHPLGVLSNLTALNMNVPGLSGLASGLAAGHHGDVLEKLKMQVRDMKVGALMGEQMAADFAALHAASSPFGAALAASTANGAGNGMGMFGSGRDDARGGSGGSGSSGGSMNVGSGGGGGGGAAGGGSQAQTGPQNGSNFSFTLPNAPISKDGNPGSNSSTSSETSNSSQQNNGWSFEEQFKQVRQVSHQHKALNRNSVWLTLYEINDDPKRKEFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDSPSVQRSPIPQGISQMPPLSLVSHVNQQQHHHRLLPPVGQIPNMLPAEFEQRMLNYIKMFQPKEMGRSQSPDKLSALNAIDISRVALWNMYNPSPNSPPNSLNTSPENNMQSALDLSESPDHAMAAIKRERDHPVDFSDPRDYGNGLGPPAKRSHHHHHSHHHNRSLTPQKLNSSSQDEDDARSDSTPVNLRENGSHGRRATLDDDGDDEEDEMEDETTDEDMLRASFAAAAAAAAVNQHPLALSLADHHLQQQQQQQQQQQQQQRERERIQQQVAAQQQQQQQREQQHSLATLDLSILDRERLRCDSADKLKRQSQQQQQQQQQQQQQQLLDQHHLHQRQLQHQQQARVARELRKHENGDRLSLTPDSSELLHHSKNHLSTSGGGGGAGSDPFSSPLGITGMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFANPLSSANLSAPPASTPPSSSVSATSASPIGSMVSPVKSSAAAHIASPLDERDSSASANIDVAAMGSALAATATVTSNASSNATCIQQQPLDGAVTPPAALSITAPSVGASSPARSLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104941;
- 90% Identity
- iTF_00102165;
- 80% Identity
- -