Basic Information

Insect: Anopheles gambiae
Gene Symbol: retn_1
Assembly: GCF_000005575.2
Location: NT:10651450-10734138[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.4e-25 2.6e-22 78.5 0.0 2 89 282 367 281 367 0.96

2 2 2.6 4.6e+03 -2.4 0.4 25 39 726 740 708 775 0.57

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.4e-25	2.6e-22	78.5	0.0	2	89	282	367	281	367	0.96
2	2	2.6	4.6e+03	-2.4	0.4	25	39	726	740	708	775	0.57

Sequence Information

Coding Sequence: ATGGACGCACCCATGTCCGGCAAAGCCCAGATTGGATACTCCCACACGGCAGACGAACACTCCGATCGCGAGACGGATCACGGTCGGGACGGTGAGTCGAGCGACGAGGGCGTTAATGTGAATCGCCCGTCGCCGGACGCAAAGATGACATCCGGCATGGAGTTTGGCAGAAGTCCAGACCATCACTCGGAGCTAAGCCAGGCAACGgccgctgcagcagcggcagccgcagcagcagccgcagccgcCCAGTTCGGGGCCAACCATCCGCTGGGCGTGCTGAGCAATCTGACGGCGCTCAACATGAACGTACCGGGGCTGTCCGGGCTGGCGTCGGGGCTGGCTGCGGGACACCATGGGGACGTGCTCGAAAAGCTGAAGATGCAGGTGCGCGACATGAAGGTGGGCGCACTGATGGGCGAACAAATGGCGGCTGACTTTGCGGCGCTTCATGCTGCCTCGTCGCCGTTCGGGGCCGCTCTTGCCGCCAGCACTGCCAACGGAGCCGGCAACGGCATGGGCATGTTCGGTTCCGGTAGAGATGATGCACGGGGTGGAAGTGGTGGGAGTGGTTCTAGTGGTGGTTCTATGAATGTTGGTAgcggcggaggaggaggaggtggagctgctggaggaggttcACAAGCGCAGACGGGGCCACAGAATGGGAGCAATTTTTCCTTCACCCTTCCGAATGCACCGATCAGCAAGGATGGCAATCCCGGTTCCAATTCGTCAACCTCGAGTGAAACGTCGAACTCGtcgcaacaaaacaacggCTGGAGCTTCGAGGAGCAATTCAAACAAGTACGACAGCTGTACGAAATCAACGATGACCCGAAGCGGAAGGAATTTTTGGACGATCTGTTCCTGTTCATGCAAAAGCGAGGCACTCCCATCAACCGTTTGCCGATCATGGCCAAATCGGTGCTGGATCTGTACGAGCTGTACAACCTCGTTATCGCACGCGGAGGGCTTGTCGACGttatcaacaaaaaactgtgGCAAGAAATCATCAAAGGACTGCATCTACCTTCCAGCATCACCAGCGCTGCATTTACCCTACGAACACAGTACATGAAGTATCTCTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCAGAACTGCAGGCGGCCATCGATGGAAACCGGCGCGAGGGTCGTCGCTCTAGCTATGGCCAGTTTGATTCGCCCTCAGTGCAACGTTCGCCGATTCCGCAAGGCATTTCGCAGATGCCGCCCCTGTCGCTGGTGTCGCACgtcaaccagcagcagcaccatcaccggctgctgccaccggtcgGCCAAATACCGAACATGCTGCCGGCCGAGTTCGAGCAGCGCATGCTGAACTACATCAAGATGTTCCAGCCGAAGGAGATGGGCCGCTCGCAGAGCCCGGACAAGCTGTCCGCCCTGAACGCGATCGACATTTCGCGCGTCGCCCTGTGGAACATGTACAACCCCAGCCCGAACAGTCCACCGAACTCGCTCAACACTAGCCCGGAAAACAATATGCAAAGTGCTCTCGATCTGTCGGAATCGCCCGATCACGCAATGGCAGCGATCAAGCGCGAACGGGACCATCCGGTCGACTTTAGCGATCCGCGTGACTACGGCAACGGGCTGGGACCGCCGGCCAAGCGcagccaccatcatcatcactcgCACCATCACAACCGCTCGCTAACGCCCCAGAAGCTAAACAGTTCCTCGCAGGACGAAGATGACGCCCGGTCGGACAGTACACCGGTCAACCTGCGCGAGAATGGGTCGCACGGACGTCGTGCCACGctcgacgacgacggtgacgacgaggaggacgaaaTGGAGGACGAAACGACCGACGAGGACATGCTGCGGGCATCGTTTgctgcggccgccgccgccgctgccgtcaACCAGCACCCGCTCGCGCTCAGCCTTGCCGATCACcatcttcagcagcagcagcagcagcaacaacagcagcagcagcaacgtgaGCGAGAACGTATCCAGCAGCAGGTGGCcgcccagcaacagcagcagcagcagcaacagcgcgAACAGCAACACAGTCTCGCCACGCTCGATCTGAGCATACTGGACCGCGAGCGGCTACGCTGTGATAGTGCCGACAAGCTGAAGCGCCAAagccaacaacagcagcaacagcagcaacagcaacaacagcagcatctgTTGGATCAGCATCATCTGCACCAAAGGCAattgcagcaccagcagcaggcgcGTGTTGCGCGCGAGCTGCGCAAGCACGAGAATGGCGATCGGCTCAGCCTGACGCCGGACAGCAGCGAGCTGCTGCACCACTCGAAGAATCATCTATCGACGAGCGGTGGCGCTGGTGGAGCCGGTAGCGATCCATTCAGCTCTCCGCTGGGCATTACCGGCATGCAGTTTAAGCTGATCAGTCGAGGTGACGCTAGCAAAGGCGACCAGAAGCTGGTGGTCACGATGGAGTTCAATGGCGTCCAGTACGAGGGTGTCCTGTTCGCGAACCCGCTCTCCTCCGCCAACCTGTCAGCGCCGCCGGCCTCGACGCCGCCCTCCTCGTCCGTGTCGGCTACCTCAGCCTCCCCGATCGGTTCCATGGTATCGCCGGTCAAGTCCAGTGCCGCCGCCCACATCGCGTCACCCCTCGACGAGCGTGATTCGTCCGCGTCTGCGAACATTGACGTGGCGGCGATGGGCAGTGCACTGGCAGCAACCGCAACCGTGACCAGCAACGCCAGCAGTAATGCCACCTGCATCCAGCAGCAACCACTGGACGGTGCAGTATCGCCACCAGCAGCCCTCTCGATCACTGCACCTTCGGTTGGTGCCTCAAGCCCTGCCAGGTCGTTAGTTTCATAG
Protein Sequence: MDAPMSGKAQIGYSHTADEHSDRETDHGRDGESSDEGVNVNRPSPDAKMTSGMEFGRSPDHHSELSQATAAAAAAAAAAAAAAQFGANHPLGVLSNLTALNMNVPGLSGLASGLAAGHHGDVLEKLKMQVRDMKVGALMGEQMAADFAALHAASSPFGAALAASTANGAGNGMGMFGSGRDDARGGSGGSGSSGGSMNVGSGGGGGGGAAGGGSQAQTGPQNGSNFSFTLPNAPISKDGNPGSNSSTSSETSNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDSPSVQRSPIPQGISQMPPLSLVSHVNQQQHHHRLLPPVGQIPNMLPAEFEQRMLNYIKMFQPKEMGRSQSPDKLSALNAIDISRVALWNMYNPSPNSPPNSLNTSPENNMQSALDLSESPDHAMAAIKRERDHPVDFSDPRDYGNGLGPPAKRSHHHHHSHHHNRSLTPQKLNSSSQDEDDARSDSTPVNLRENGSHGRRATLDDDGDDEEDEMEDETTDEDMLRASFAAAAAAAAVNQHPLALSLADHHLQQQQQQQQQQQQQRERERIQQQVAAQQQQQQQQQREQQHSLATLDLSILDRERLRCDSADKLKRQSQQQQQQQQQQQQQHLLDQHHLHQRQLQHQQQARVARELRKHENGDRLSLTPDSSELLHHSKNHLSTSGGAGGAGSDPFSSPLGITGMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFANPLSSANLSAPPASTPPSSSVSATSASPIGSMVSPVKSSAAAHIASPLDERDSSASANIDVAAMGSALAATATVTSNASSNATCIQQQPLDGAVSPPAALSITAPSVGASSPARSLVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00104941;
90% Identity: iTF_00093256;
80% Identity: -