Aepi009261.1
Basic Information
- Insect
- Anopheles epiroticus
- Gene Symbol
- retn
- Assembly
- GCA_000349105.1
- Location
- KB671839:60196-76753[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-19 1.7e-16 59.8 0.0 16 89 18 89 13 89 0.94 2 2 1.6 2.7e+03 -1.7 0.5 27 38 451 462 427 491 0.56
Sequence Information
- Coding Sequence
- ATGTATGCATGCGCATGTGTCTCAGGAGAAGATGTCAAAATTGATTGTCAGATAGGCACTCCCATCAACCGTCTGCCCATCATGGCCAAATCGGTGCTGGATCTGTACGAGCTGTACAACCTCGTAATAGCACGTGGCGGACTCGTCGACGTTATCAACAAGAAGCTGTGGCAGGAAATCATCAAAGGACTGCATCTGCCCTCCAGCATTACCAGCGCCGCATTTACCCTACGAACACAGTACATGAAGTATCTCTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCGGAACTGCAGGCGGCCATCGATGGAAACCGGCGCGAGGGTCGTCGCTCGAGCTATGGCCAGTTTGATTCGCCCTCTGTTCAACGTTCCCCGATTCCGCAAGGCATTTCCCAGATGCCGCCGCTCTCGCTAGTGTCGCACGTCAACCAGCAGCACCACCAGCACCGGCTGCTGCCCCCCGTCGGCCAAATCCCAAACATGCTGCCGGCCGAGTTCGAGCAGCGCATGCTGAACTACATCAAGATGTTCCAGCCGAAGGAGATGGGCCGCTCGCAGAGCCCGGACAAGCTGTCCGCGCTGAACGCGATCGACATCTCGCGCGTGGCCCTCTGGAACATGTACAACCCGAGCCCGAACAGTCCACCGAACTCGCTCAACACAAGCCCGGAGAACAACATGCAAAGCGCTCTCGACCTCTCGGAGTCACCGGACCACGCAATGTCGGCGATCAAGCGCGAGCGCGACCATCCGGTCGACTTTAGTGACGCGCGGGACTACGGCAACGGGTTGGGACCGCCGGCCAAGCGCAGTCACCATCATCACCACTCGCACCACAACCGCTCGCTAACGCCCCAGAAGCTGAACAGTTCCTCGCACGACGAAGATGACGCACGGTCGGACAGTACGCCGATCAATCTGCGGGAGAACGGATCGCACGGGCGTCGCCCCCCGCTggacgacgatggggacgatgaggaggacgagatggaggacgaaacgaccgaggaggatATGCTGCGTGCGTCGTTCGCTGCGGCcgctgcggcagccgttaatcagcacccgctcgctctcagccttgccgatcatcatctgcagcagcagcagcagcaccagcaccagcagcagcaacagcaacgtgagcgggaacgcatccagcagcaggtggccgcccaccagcagcagcagcgtgagcagcagcgcgacagtctggccacactggatctaagcatactggaccgcgagcggcttcgctgtgacagtgcggacaagctgaagcgtcagagccagggtcagcaacagcagcaacatcaacagcagcaacagcagcagcagcaacagcagctgctggatcagcatcaccttcaccaaaggcaattgcagcaccagcaacagtcgcgtgtggcgcgggagctgcgaaagcaCGAGAATGGCGATCGGCTCAGTCTGACCCCGGACAGTGAGCTGCATCACTCGAAGGGACATCTGTCGACGAGCGGCGGTGGAGCTGGCAGCGATCCGTTCAGCTCCCCACTGGGCATTACCGGCATGCAGTTTAAGCTGATCAGTCGAGGTGACGCCAGCAAAGGTGACCAGAAGCTCGTGGTGACGATGGAGTTTAACGGCGTCCAGTACGAGGGCGTCCTGTTCGCCAACCCACTATCCTCCACCAACCTGTCCGCACCGGCCTCGACACCACCCTCCTCCTCCGTGTCGGCAACATCGGCCTCCCCGATCTGTTCCCTCGTTTCCCCGGTCAAATCCAGCGCTGCCCACATCTCATCCCCGCACGACGAACGGGACACGGCGGCCACGAGCGTTGACTTGGCGTCGACTGCAAGCGGCACAACTGCCACCGTGTCCACCAATGCCGCCAGCACCACCAACATCTGCATCCCGTCGCTGGACAGTGCTGGAACGTCACCGGCACCAATCCTTCCGACGGCGACGACGACGGCAACATCCGCGATCGGTGCAGTAAGCCCCGCAAGATCGATGGTTTCATAG
- Protein Sequence
- MYACACVSGEDVKIDCQIGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDSPSVQRSPIPQGISQMPPLSLVSHVNQQHHQHRLLPPVGQIPNMLPAEFEQRMLNYIKMFQPKEMGRSQSPDKLSALNAIDISRVALWNMYNPSPNSPPNSLNTSPENNMQSALDLSESPDHAMSAIKRERDHPVDFSDARDYGNGLGPPAKRSHHHHHSHHNRSLTPQKLNSSSHDEDDARSDSTPINLRENGSHGRRPPLDDDGDDEEDEMEDETTEEDMLRASFAAAAAAAVNQHPLALSLADHHLQQQQQHQHQQQQQQRERERIQQQVAAHQQQQREQQRDSLATLDLSILDRERLRCDSADKLKRQSQGQQQQQHQQQQQQQQQQQLLDQHHLHQRQLQHQQQSRVARELRKHENGDRLSLTPDSELHHSKGHLSTSGGGAGSDPFSSPLGITGMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFANPLSSTNLSAPASTPPSSSVSATSASPICSLVSPVKSSAAHISSPHDERDTAATSVDLASTASGTTATVSTNAASTTNICIPSLDSAGTSPAPILPTATTTATSAIGAVSPARSMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00103471; iTF_00098800;
- 90% Identity
- -
- 80% Identity
- -