Adir005539.1
Basic Information
- Insect
- Anopheles dirus
- Gene Symbol
- retn
- Assembly
- GCA_000349145.1
- Location
- KB672791.1:4810056-4851482[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-25 1.8e-22 79.0 0.0 2 89 57 142 56 142 0.96 2 2 2.5 3.8e+03 -2.2 2.3 12 49 501 537 488 566 0.59
Sequence Information
- Coding Sequence
- ATGCGAAAGATTAAGCCCGTTTATAGCTTCAAGGCAACTTGCTTCACGTCCGGTTGGCACTCGTCGGCGCTCGGTATGATGGATATTACGGTGGCCGGGTGTGACGTGGCACCGGCGGCCCGTCCGGCAGGCTCTGCTCAGcTGTACGAAATCAACGATGACCCGAAGCGGAAGGAATTCCTGGACGATCTGTTCCTGTTCATGCAGAAGCGAGGCACTCCCATCAATCGTTTGCCGATCATGGCCAAATCGGTGCTGGATCTGTACGAGCTGTACAATCTGGTCATCGCGCGCGGAGGACTCGTCGACGTGATCAACAAGAAGCTGTGGCAGGAAATCATCAAGGGGCTCCATCTGCCCTCCAGCATCACCAGCGCCGCATTTACGCTAAGAACACAGTACATGAAGTATCTCTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACGCCAGCCGAGCTGCAGGCGGCCATCGATGGAAACCGGCGCGAGGGTCGTCGCTCGAGCTATGGCCAGTTTGATTCGCCGTCCGTTCAACGCTCACCGATTCCGCAGGGTATCTCACAGATGCCGCCACTGTCGCTGGTGTCACACgtcaaccagcagcagcatcaccatcgACTGCTGCCACCCGTCGGCCAAATACCGAACATGCTGCCGGCCGAGTTCGAGCAGCGCATGCTCAACTACATCAAGATGTTCCAACCGAAGGAGATGGGTCGTGCCCAAAGTCCGGACAAGTTGTCCGCCCTAAACGCGCTGGACATATCGCGCGTTGCGCTCTGGAACATGTACAATCCCAGCCCGAACAGTCCACCGAACTCGCTCAACACCAGCCCGGAGAACAATATGCAGAGCGCTCTCGATCTCTCGGAATCGCCGGACCACGCAATGGCGGTGATCAAACGCGAGCGGGATCATCCGGTCGACTTCAGCGATCCGCGCGACTACGGAAACGGTCTCGGGCCGCCGGCCAAACgcagccaccaccatcaccactcgCATCACAACCGCTCGCTAACGCCGCAGAAGCTGAACAGTTCCTCGCACGATGAAGACGATGCCCGGTCCGGCAGTACGCCGATCAACCTGCGCGAAAACGGCGCCCATGGCCGCCGTCCGACGCTGGACGATGATggggacgacgaggaggacgacatGGAGGACGAGACGACGGAGGAGGACATGCTGCGGGCTTCGTTcgcggcagcggccgctgctgccgtcaACCAGCACCCACTAGCGCTCAGCCTCGCCGACcatcatctgcagcagcaacagcagcaacaccatcagcaacaacagcagcagcagcaacaacagcgcgAGCAGCGTGAACGAGAGCGcgtccagcagcaggtcgTGGCCGCACAGCGTGAGCAgcgcgaacagcagcacctAGCAACGCTCGACCTAAGCATACTAGATCGCGACCGGCTGCGCTGTGACAGTGCGGACAAGTTGAAACGTCAtagccaacagcagcatcagcagcaacagcaacatcagcagcagcaacagcagcaacagcagcaacagcaacaacagcagttgCTGGACCAGCATCACCTTCACCAAAGGCAGctgcaacaccaacagcaagcTCGCGTTGCCCGTGATCTGCGGAAGCACGAGAACGGTGACCGGCTCAGTCTAACACCCGACAGTGAGCTACATCATTCGAAGAGTCACCTTTCGACGAGTGGCGTGGGAAGCGGTGCAGGATTAACCGATCCCTTCAGCTCTCCACTCGGCATTACGGGCATGCAGTTCAAACTGATCAGTCGAGGCGATGCCAGCAAGGGCGACCAGAAGTTGGTGGTGACGATGGAATTCAACGGAGTCCAGTACGAGGGCGTCCTGTTTGCGAACCCGCTCTCCACGGCCAACCTCTCCGCACCGACCTCGACGCCACCCTCCTCCTCCGTGTCGGCCACCTCGGCATCCCCAATCGGTTCCATGGTATCGCCGGTGAAATCCTCCAGcgccgcagccgctgccgctcTCATCTCGCCCCTCGACGATCGCGACACgtcggccaccgccaccgccaacaTGGACGCCATCGTCCCGATGTCCCTACCGGCGGCGAACGGTAGCACCACGACACCGACaatgctgcagcagctgcaggatgTTGGTGTGACGCCGGTCGGCCAGCAGCTCCAGAGCTCCACACCCTCGGCGGCACCCACGAGTCCGGCACGATCGCTCGTCTCCTAG
- Protein Sequence
- MRKIKPVYSFKATCFTSGWHSSALGMMDITVAGCDVAPAARPAGSAQLYEINDDPKRKEFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDSPSVQRSPIPQGISQMPPLSLVSHVNQQQHHHRLLPPVGQIPNMLPAEFEQRMLNYIKMFQPKEMGRAQSPDKLSALNALDISRVALWNMYNPSPNSPPNSLNTSPENNMQSALDLSESPDHAMAVIKRERDHPVDFSDPRDYGNGLGPPAKRSHHHHHSHHNRSLTPQKLNSSSHDEDDARSGSTPINLRENGAHGRRPTLDDDGDDEEDDMEDETTEEDMLRASFAAAAAAAVNQHPLALSLADHHLQQQQQQHHQQQQQQQQQQREQRERERVQQQVVAAQREQREQQHLATLDLSILDRDRLRCDSADKLKRHSQQQHQQQQQHQQQQQQQQQQQQQQQLLDQHHLHQRQLQHQQQARVARDLRKHENGDRLSLTPDSELHHSKSHLSTSGVGSGAGLTDPFSSPLGITGMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFANPLSTANLSAPTSTPPSSSVSATSASPIGSMVSPVKSSSAAAAAALISPLDDRDTSATATANMDAIVPMSLPAANGSTTTPTMLQQLQDVGVTPVGQQLQSSTPSAAPTSPARSLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099475;
- 90% Identity
- -
- 80% Identity
- -