Amac009962.1
Basic Information
- Insect
- Anopheles maculipalpis
- Gene Symbol
- retn
- Assembly
- GCA_943734865.1
- Location
- CALSEK010000165.1:579434-599283[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-19 4.3e-16 58.9 0.0 17 89 3 73 1 73 0.94
Sequence Information
- Coding Sequence
- ATGAAAAGCACTCCTATTAACCGTCTGCCGATTATGGCCAAGTCGGTGCTGGATCTGTACGAGCTGTACAACCTGGTGATTGCACGCGGAGGTCTCGTCGATGTTATCAACAAGAAGCTGTGGCAGGAAATCATCAAAGGACTGCATCTTCCTTCCAGCATTACCAGCGCTGCATTTACACTACGAACACAGTACATGAAGTATCTCTATCCGTACGAGTGCGAGAAGAAGAACCTGAGCACACCTGCTGAGCTGCAGGCCGCCATCGATGGAAACCGGCGCGAGGGTCGTCGCTCTAGCTATGGCCAGTTTGATTCGCCATCCGTACAACGCTCACCGATTCCGCAGGGCATTTCACAGATGCCGCCACTATCGCTGGTTTCACACGTCAACCAGCAGCAGCACCATCATCGGCTGCTGCCACCGGTCGCCCAAATACCGAACATGTTGCCGGCCGAGTTTGAGCAGCGCATGCTTAACTACATCAAGATGTTCCAGCCGAAGGAGATGGGCCGGGCGCAAAGTCCGGACAAATTGTCCGCGCTGAATGCGATCGATATTTCACGTGTTGCGCTCTGGAACATATACAACCCGAGCCCGAACAGTCCACCGAACTCGCTCAACACTAGCCCGGAAAATAACATGCAAAGCGCTCTCGATCTTTCCGAATCGCCCGATCATGGCATGTCGGCGATCAAACGCGATCGTGATCATCCGGTCGATTTTAGCGATCCACGAGACTACGGCAACGGATTAGGACCACCGGCCAAACGTAGCCACCATCATCACCATTCACATCACAACCGTTCACTAACGCCGCAGAAGCTAAACAGTTCCTCGCACGATGAAGATGACGCCCGGTCCGATAGTACACCGATCAACCTGCGCGAGAACGGTGGTCACGGGCGCCGTCCCACGCTGGACGACGATGGAGACGACGAGGACGACGAGATGGAGGATGAACCTACGGAAGAGGACATGTTGCGTGCgcaattcgctgcggctgctgcagctgcagccgttaatcagcacccgcttgcactaagccttgctgatcatcatctacagcaacaacagcagcagcagcagcagcaacagcagcaacaacagcagcaacaacatctgcagcaacgtgaacgagagcgtgttcagcagcaggttgccgcgcagcagcgcgaacagcaacacagtctcgcaacgctcgatctaagcatattggatcgcgagcggctacgttgcgatagtgctgataagctgaagcgtccgagtcagcaacaacaacagcagcagcagcaacagaatcaacagcagcaacagttgttggatcaccaaaggcaatacgcgcaccagcagcaacaatcgcgtgtggcgcgagaactccgaaagcatgagaacggtgatcGACTCAGCTTGACCCCGGACAGTGAGCTGCACCATTCGAAAAATCATCTGTCCACGAGCGGCAGTGGCGCGGGAACGGGACTGACGGATCCGTTTAGCTCTCCGCTAGGGATTTCCGGCATGCAGTTTAAGTTGATCAGTCGAGGCGACGCAAGCAAAGGCGATCAAAAGCTCGTAGTAACGATGGAATTTAACGGTGTCCAGTACGAAGGCGTCCTGTTCGCCAACCCGCTCACCTCCAACACCCTTTCCGCACCGACCTCGACACCGCCCTCCTCCTCCGTATCGGCTACATCCGCCTCCCCGATCGGTTCCATGGTATCGCCGGTGAAGTCCAGTGCGGCACTCATCTCACCGCTGGATGATCGTGATTCAATCAACTCGAATGTGGATCTCCCACCGGTAGCACTATCCTCGTCGAACGGTACCACCGCAAACAGTCTGCCTAGTAGTAGTGCTGCCGCTGCCGCAACGACGCCCGTTCCCAACCCAACCtgcatccagcagcagcagcagcagcagcaacagGACAGTGTGATTCCACCGAGCGCTCCTTCGATGGGTGGCACCAGCCCGGCAAGATCGATGGTGTCATAG
- Protein Sequence
- MKSTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDSPSVQRSPIPQGISQMPPLSLVSHVNQQQHHHRLLPPVAQIPNMLPAEFEQRMLNYIKMFQPKEMGRAQSPDKLSALNAIDISRVALWNIYNPSPNSPPNSLNTSPENNMQSALDLSESPDHGMSAIKRDRDHPVDFSDPRDYGNGLGPPAKRSHHHHHSHHNRSLTPQKLNSSSHDEDDARSDSTPINLRENGGHGRRPTLDDDGDDEDDEMEDEPTEEDMLRAQFAAAAAAAAVNQHPLALSLADHHLQQQQQQQQQQQQQQQQQQHLQQRERERVQQQVAAQQREQQHSLATLDLSILDRERLRCDSADKLKRPSQQQQQQQQQQNQQQQQLLDHQRQYAHQQQQSRVARELRKHENGDRLSLTPDSELHHSKNHLSTSGSGAGTGLTDPFSSPLGISGMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFANPLTSNTLSAPTSTPPSSSVSATSASPIGSMVSPVKSSAALISPLDDRDSINSNVDLPPVALSSSNGTTANSLPSSSAAAAATTPVPNPTCIQQQQQQQQQDSVIPPSAPSMGGTSPARSMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099475;
- 90% Identity
- -
- 80% Identity
- -