Basic Information

Gene Symbol
Ubp1
Assembly
GCA_000349105.1
Location
KB671677:39995-53379[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.19 2.2e+03 -2.9 0.3 94 101 121 128 88 178 0.59
2 3 1 1.2e+04 -7.1 7.0 93 108 244 259 226 289 0.46
3 3 1.5e-63 1.8e-59 200.2 0.1 24 220 394 607 376 610 0.92

Sequence Information

Coding Sequence
ATGGAATACTCCGGAAGTCCCGGTCCTTACCAGTACcagcagcacgatcagcagcagcagcaccatcaggcaacgaggcaacgtcaagggcagcaaGATTTCGAGCAGATCTCTCCCGGCTACAACCTGGACAGCGAGGACACGTACAGCGGTTCGCCCAACAACTTCCAGGACTACCAGAACAACTTTGTCGATTCGCCGCCCGATTCGAAGGAACCGTGGCCGATCGACTACAACAAGATGCACACCGCGATCGCGTCGAGCAGCGGTGCCAATGATacgacgaacgctccgacgaccgtaacggcgaccggtgtcgcagttgctgctgctgcaacctctcaccatcaacagcaacagcagcaacagcaacagcagcagcagcagcaacaacaacaacaggataatggtggcaTGTACATAAACAACGCCATACTTCCCAGCAGAAAGCGACGGGTGGAATGGATGTCACCGCAGGAGGAGGACACCGACGGCACGGAGACAAAGATCGCTAACATCGATAAGGAGCGTGACGCACGTCGCAAGGGAAGCATGCGCTGGGCCGATGATCTTGATTTAGACCTCAGCAATGAGTTGTCCAGTAACGGATACATTAGTGATTCGCTGTTAAATTTTCCCGTGTTCAAACAAGAATTGCCATCACCTCCTCAAAAGGCTCCTcagcaccaacagcaacaacactcccagactgcccagcagcagcagcaacagcagcaacagcagcaacagcagcaacagcatcaactccatcaccaacaacagcagcaaagtttgcaccagcaagcggcaagctctcaggaccatccgcaacaatcccaacacacgcaggccagcctgcagtcatcgttaggaggcggtattgcttctggtaatggtggaaatgttggcaactctcatcaacagcagcaacaggtggcacaatatcaccagcagcaacagccgcagcaacagcaacagggtcaaagttcgatgaacggtggtgccccgGGACTGATGAACAATGCGGATCATCATCACCACGTGGCCACGGGCATCAGTGTCGGGTTGAGCAATTTGCAGAGCTTCCTCCAAAGCAACCGGCTGGACGCTGATCCTAGTGGAGGCATTCTGCAGATGCAACAGGATGGCACGCTAGGAGCAGCACGTGGCGACAAAACGCATGACGATCACAATCGATTTCAGTACGTGCTGGCGGCCGCAACCTCGATAGCAACGAAGAACAATGAAGAATCTCTCACCTACCTTAACCAGGGACAGAGCTACGAGATTAAGCTGAAGAAGCTTGGCGATCTGTCCCCGTTCAGGGGGAAGATTCTGAAAAGTATTATCAAGATATGCTTCCACGAGCGCCGGCTGCAATACATGGAGCGAGAACAGATGCAGCTCTGGCAAGCGTCCCGCCCTGGCGAGCGTATTTTGGACGTTGACATCCCACTGTCGTATGGGTTAATGCAGGTTCAACCGACCAGTAGCAACCTGCTCAACACGATCGAGGTGTTTTGGGACCCCATGAAGGAGGTCGGCGTGTACGTGAAGGTGAACTGCATTTCTACGGAATTTACCCCCAAGAAGCATGGTGGTGAGAAGGGTGTACCGTTCCGGATTCAGGTAGAGACGTACATCGACACGACCGGGTTGCAGAATGGCACTGGTGGTGCTACTGGAGGTGCCGTTGTTGGCGGTGTAGATGATAAGGACGGTATAAGACCACTCCATGCGGCGGCTTGTCAAATAAAGGTGTTCAAATTGAAGGGAGCCGATCGAAAGCACAAACAGGATCGAGAGAAAATACTCAAGCGTCCGGTCGCGGAGCAGGAAAAGTACCAGCGCAGCTGCGACTGCACGATACTGACGGACATTACGACCGATTCAGTCATTACGCCGCTCGGTGGCAGCTTTAGTCCCGACCACATTAAACGTAACGTGTCACCATTGCTGGCCGGTCCATCTTCACCTGGGCAGCTGAACAAGTTCGAAACCATCATGTCGAGTGTGCTGTGCAACGGTACGAATGGTGTTAACCCGGGGGTAAAAGCGACCCCAACGACGACGGCGGCCGCAGCGATGGTTGTTGCAGCGGCTGCGGCTGCGGTTGCCGGTGTACAGAGCAACCATCCGATTGGTATCAGCAATGTCAGCTCCACGAACGGGCTTTGCAAAGCGTCCCCGCTCGGCGATCAACCGGTCGGTGGCGTGCTTTCTCCGCAGCAACCTAGCGAACTGGACGATTACGTACCGACCATTACGAAGGAAACGAGCCCAGGAGCGCTGACACAGTGGTTGGCCGTCCATCGGCTGTCCGCTTACGCGAAAACGTTTGCTCAATTTTCCGGTTCAGATCTGTTAAGGATGTCCAAGGAGGATCTTTGTAAAATCTGTGGCCTAGCCGACGGTATTCGTATGTTTAACATTCTTCATTCGAAAGCCATCACACCTCGCTTAACGATCTACGTGAGCTTCGAGGCAAACATTTACCATGCGATCTATCTGCACTCAAACACCATCCCAGAACTGGTGCAAAATCTGTCGAAAATTCCTGGCTTCCTGGAGGCCATCAATGCACTCAACACGCCAAACTGTTCCACACCCGATGCGGGACTCTGGAACGGAGGAGGTACGTTCGGGACACGTGGTGCCACTTCCAGCAGTAGCAgtggtggtggtggtggtggCGTTATGGGGAGTAAACTTTCTGCTCCCAAAAATGTGCAGCTCTCCGTACCATCTCCTTCGTCACCACCGATCTCGTCCTCGTGCGGTGTTGCCAAGTTGCAGCTGCTCATAAACGGCCCGAACGGCATACAGGTGCTGCTGACGGAGGATGTGCTGAACAACATCAAGGACGAGACGCTGTTCCAGCTGGAGCTGAAATCTAATGGCCACATACTGATGAAAGCGGTCCACAGTGTTACAGCGACGGCATCGGCCGGTGGAGAGTGTTCGATCGACGATGATGCGAACTGA
Protein Sequence
MEYSGSPGPYQYQQHDQQQQHHQATRQRQGQQDFEQISPGYNLDSEDTYSGSPNNFQDYQNNFVDSPPDSKEPWPIDYNKMHTAIASSSGANDTTNAPTTVTATGVAVAAAATSHHQQQQQQQQQQQQQQQQQQDNGGMYINNAILPSRKRRVEWMSPQEEDTDGTETKIANIDKERDARRKGSMRWADDLDLDLSNELSSNGYISDSLLNFPVFKQELPSPPQKAPQHQQQQHSQTAQQQQQQQQQQQQQQQHQLHHQQQQQSLHQQAASSQDHPQQSQHTQASLQSSLGGGIASGNGGNVGNSHQQQQQVAQYHQQQQPQQQQQGQSSMNGGAPGLMNNADHHHHVATGISVGLSNLQSFLQSNRLDADPSGGILQMQQDGTLGAARGDKTHDDHNRFQYVLAAATSIATKNNEESLTYLNQGQSYEIKLKKLGDLSPFRGKILKSIIKICFHERRLQYMEREQMQLWQASRPGERILDVDIPLSYGLMQVQPTSSNLLNTIEVFWDPMKEVGVYVKVNCISTEFTPKKHGGEKGVPFRIQVETYIDTTGLQNGTGGATGGAVVGGVDDKDGIRPLHAAACQIKVFKLKGADRKHKQDREKILKRPVAEQEKYQRSCDCTILTDITTDSVITPLGGSFSPDHIKRNVSPLLAGPSSPGQLNKFETIMSSVLCNGTNGVNPGVKATPTTTAAAAMVVAAAAAAVAGVQSNHPIGISNVSSTNGLCKASPLGDQPVGGVLSPQQPSELDDYVPTITKETSPGALTQWLAVHRLSAYAKTFAQFSGSDLLRMSKEDLCKICGLADGIRMFNILHSKAITPRLTIYVSFEANIYHAIYLHSNTIPELVQNLSKIPGFLEAINALNTPNCSTPDAGLWNGGGTFGTRGATSSSSSGGGGGGVMGSKLSAPKNVQLSVPSPSSPPISSSCGVAKLQLLINGPNGIQVLLTEDVLNNIKDETLFQLELKSNGHILMKAVHSVTATASAGGECSIDDDAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-