Basic Information

Gene Symbol
Ubp1
Assembly
GCA_016920715.1
Location
NC:83610999-83630342[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2 1.2e+04 -6.0 3.1 5 25 382 402 376 406 0.46
2 2 1.7e-63 1e-59 201.0 0.0 15 221 459 677 448 679 0.90

Sequence Information

Coding Sequence
ATGGCGACGGTCATCTCACTGTTGGCTAACCACTGCAACAGTCCCTTCGagcagcatcaccagcagcagcagcagctactcCAGTGTCCAGTGTACGAGCCGGGACCGGTAACGCTTCAGCAGCGATACAGCGGtaccggcggcagcggcggcggcggtggtggtcgaAACCGATCCGAACCGGCGGCGGcgtatcagcagcagcagctggacgCGTTAGATTTTCATCTGTTCAGCCGAACGCTCGAGCAAGAGTTCGAACAAATGGAATACTCCGGAAGTTCCGGTCCTTACCAACAGTACCAGCAgcacgatcagcagcagcagcagcagcagcagcaagcatcAGCAAGACGTCAAGGGCAGCaagatttcgagcagATCTCCCCCGGCTACAACCTGGACAGCGAGGACACGTACAGCGGTTCGCCGAACAACTTCCAGGACTACCAGAACAACTTTGTCGATTCGCCGCCCGATTCGAAGGAACCGTGGCCGATCGACTATAACAAGATGCATACCGTGATCGCGTCGAGCAGCGGTGCCAACGATACGACGAACGCATCGCCGACCGTCACGGCGGTCGCGGTTGCTACGGTGGCCGGTCCCACGATTGCTGCCGTAACTTCTCTccatcatcagcaacagcagcagcagccgcagcaggaTAATGGTGGAATATTCTTAAACAACGCCATACTTCCCAGTCGAAAGCGACGGGTGGAATGGATGTCACCACAGGAGGAGGACACCGACGGCACCGAGACAAAGATTGCCAACATCGATAAGGAGCGTGACGCACGTCGCAAGGGAAGCATGCGTTGGGCCGATGATCTTGATTTGGACCTCAGCAATGAGCTCTCCAGCAACGGATACATTAGTGATTCGCTGTTGAATTTCCCTGTGTTCAAGCAGGAACTTCCATCTCCTCCTCAGAAGcATTCtcagcaccagcaacactcccaacaacaacaacagcaacatcaactccatcaacaacagcaacaaagttTGCACCAGCaggcagctgcagcagcagcagcggcagcaggcaGCTCACAAGATCATTCGCAACCATCGCAACACACCCCGTCCGGTTTGCAACCATCGCTGAGTGGAAATGTTCCCAACTctcaccaacaacagcagcagcagcagcaacaacagcaggtTGCCCAACAACAATatcaccagcaacagcagggaCAAAACTCGATGAGCGGTCCCGGGTTGATGAACAATGCGACTCATCAGCAAGCGGCCGGAGCGATCGGTGCCGGGCTGAGCAATCTGCAGAGCTTTCTGCAGAGCAACCGGCTGGACACTGATCCGAGTGGAGGCATTTTGCAGATGCAGCAAGATGGCACGCTGACAGCGGCACGTGGTGACAAAACACATGACGATCATAATCGgttCCAGTACGTGCTGGCGGCCGCCACCTCGATCGCGACGAAGAACAATGAAGAATCTCTCACCTACCTTAACCAGGGCCAGAGCTACGAGATCAAGCTGAAGAAGCTTGGCGATCTGTCCCCGTTCCGGGGGAAGATTCTGAAGAGTATTATCAAGATATGCTTCCACGAGCGCCGGCTGCAGTACATGGAGCGGGAGCAGATGCAGCTCTGGCAGGCGTCCCGGCCCGGCGAGCGCATCCTGGACGTGGACATCCCGCTGTCGTACGGGTTGATGCAGGTGCAGCCGACCAGCAGCAACCTGCTCAACACGATCGAGGTGTTCTGGGACCCGATGAAGGAGGTCGGCGTGTACGTGAAGGTGAACTGCATTTCCACCGAATTTACGCCCAAAAAGCATGGCGGCGAGAAGGGTGTACCGTTCCGGATTCAGGTAGAAACGTACATCGACaccaatggtggtggtggcggcggtgctAATGTGGCGCCGGTCGGCGGAGTGGACGATAAGGACGGCATACGACCGCTCCATGCGGCTGCTTGCCAGATAAAGGTGTTCAAATTGAAGGGAGCCGACCGGAAGCACAAACAGGATCGGGAGAAAATACTCAAGCGTCCGATGGCGGAGCAGGAGAAGTATCAGCGCAGCTGCGACTGCACGATACTGACCGACATTACGACCGATTCCGTCATCCAGCCGCTCGGTGGCAGCTTTAGCCCCGAACACATTAAACGTAACGTGTCGCCGCTGCTGACCGGTGGGCCCACCTCACCCGGGCAGCTGAACAAGTTTGAAAACATCATGTCGAGCGTGCTGGGCGGTGGCGGTGTTACCCCGAACGGGCTTAGCCCGGGGGTGAAACCGACCCCGACGACGACCGCAGCGACGGCGGCGATGGTTGTagcggcggccgccgctgccgttGCCGGCGTACAGGCCAACCATCCGATCGGCATCAGCAACGTGAGCTCCACGAACGGGCTGTGCAAAGCGTCCCCGCTCGGTGGCGAGCAGCCGATCGGTGGCGTACTGTCGCCCCAGCAGCCGAGCGAGCTGGACGATTACGTGCCGACCATTACGAAGGAAACGAGCCCGGGCTCGCTGGCGCAGTGGCTGGCCGTGCACCGGCTGTCCGCGTACACGAAAACGTTCGCCCAATTTTCCGGCTCGGATCTGTTAAGAATGTCCAAGGAGGATCTTTGCAAAATCTGTGGCCTTGCGGATGGGATTCGAATGTTCAACATTCTCCATTCAAAAGCCATCACGCCACGCCTGACGATCTACGTGAGCTTCGAAGCGAACATCTACCACGCGATCTATCTGCACTCCAACACGATCCCGGAGCTGGTGCAGAATCTGTCGAAAATTCCCGGCTTCCTGGAGGCGATCAACGCGCTCAACACGCCCAACTCGTCCGACGGGGGGCTCTGGAACGGTGCGAACACTTTCGGGAGCACGGCGGGCCGTTCGTCGCTTAACGCCGGCGGTGGCGTGGTCGCTTCCAGCAGTGGTGGAGCTAGcggcaatggtggtggtggtctggGTGGTAAATTTTCCACCCCCGGTGCCATATCACTGTCCGTGCCGTCCCCTTCGTCTCCGCCGATCTCGTCGTCGTGCGGCATTGccaagctgcagctgctgattAATGGCCCGAACGGCATCCAGGTGCTGCTGACCGAGGATGTGCTGAACAACGTGAAGGATGAGACACTGTTCCAGCTGGAGCTGAAATCGAACGGAAATATACTGATGAAAGCGGTCCACAGTGTTACGGCGGCCGGTGGCCCCGACTGCTCGATCGACGACGATGCGAACTGA
Protein Sequence
MATVISLLANHCNSPFEQHHQQQQQLLQCPVYEPGPVTLQQRYSGTGGSGGGGGGRNRSEPAAAYQQQQLDALDFHLFSRTLEQEFEQMEYSGSSGPYQQYQQHDQQQQQQQQQASARRQGQQDFEQISPGYNLDSEDTYSGSPNNFQDYQNNFVDSPPDSKEPWPIDYNKMHTVIASSSGANDTTNASPTVTAVAVATVAGPTIAAVTSLHHQQQQQQPQQDNGGIFLNNAILPSRKRRVEWMSPQEEDTDGTETKIANIDKERDARRKGSMRWADDLDLDLSNELSSNGYISDSLLNFPVFKQELPSPPQKHSQHQQHSQQQQQQHQLHQQQQQSLHQQAAAAAAAAAGSSQDHSQPSQHTPSGLQPSLSGNVPNSHQQQQQQQQQQQVAQQQYHQQQQGQNSMSGPGLMNNATHQQAAGAIGAGLSNLQSFLQSNRLDTDPSGGILQMQQDGTLTAARGDKTHDDHNRFQYVLAAATSIATKNNEESLTYLNQGQSYEIKLKKLGDLSPFRGKILKSIIKICFHERRLQYMEREQMQLWQASRPGERILDVDIPLSYGLMQVQPTSSNLLNTIEVFWDPMKEVGVYVKVNCISTEFTPKKHGGEKGVPFRIQVETYIDTNGGGGGGANVAPVGGVDDKDGIRPLHAAACQIKVFKLKGADRKHKQDREKILKRPMAEQEKYQRSCDCTILTDITTDSVIQPLGGSFSPEHIKRNVSPLLTGGPTSPGQLNKFENIMSSVLGGGGVTPNGLSPGVKPTPTTTAATAAMVVAAAAAAVAGVQANHPIGISNVSSTNGLCKASPLGGEQPIGGVLSPQQPSELDDYVPTITKETSPGSLAQWLAVHRLSAYTKTFAQFSGSDLLRMSKEDLCKICGLADGIRMFNILHSKAITPRLTIYVSFEANIYHAIYLHSNTIPELVQNLSKIPGFLEAINALNTPNSSDGGLWNGANTFGSTAGRSSLNAGGGVVASSSGGASGNGGGGLGGKFSTPGAISLSVPSPSSPPISSSCGIAKLQLLINGPNGIQVLLTEDVLNNVKDETLFQLELKSNGNILMKAVHSVTAAGGPDCSIDDDAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00099456;
90% Identity
-
80% Identity
-