Basic Information

Gene Symbol
Ubp1
Assembly
GCA_000349025.1
Location
KB663721.1:10576162-10585428[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2 1.3e+04 -6.0 4.1 17 35 336 350 312 387 0.45
2 2 2e-63 1.3e-59 200.7 0.0 24 220 451 663 434 666 0.93

Sequence Information

Coding Sequence
ATGGCGACGGTCATATCACTGTTGTCCAATCTATGCAACAGTCCATTTGATCAGCAGCATagccatcatcaccatcattcgCCGCAGCTACTCTTTCCACCGTACGGACAGGGACCGGAAACGTTACAGCAACGGTACAGCggaaccggtgccggtggtcgGAATCGAAGCAACGAAGCAAcgcatcaccaccagcagcaccagctgGACGCGCTCGATTTTCATCTGTTGAGCCGCACGCTCGAGGAAGAGTTCGAACAAATGGAATACTCCGGAAGTTCCGGTCCCTACCAgtaccaacagcagcagcacgatcagcagcagcatcaacaacaaccggCACGGCGTCAGGGACAGCAAGATTTCGAACAGATTTCTCCCGGCTACAACCTGGATAACGAAGACACGTACAGTGGGTCGCCGAACAACTTCCAGGACTATCAGAATAACTTTGTCGATTCACCGCCCGATTCGAAGGAACCGTGGCCGATCGACTACAACAAGATGCACACCACGATCGCTTCGAGCAGTGGTGCCAACGATACGACGAACGCATCGACGACCGTAACGGCGGTTGCTGTCGCTACCGCAGCTGGCACTGTTGCTCCAGTAACAtctcaacaacagcagcagcagcaacaggacaATGGCGGCATGTACATGAACAACGCCATACTGCCGAGCAGGAAGCGACGCATGGAATGGATGTCACCTCAGGAGGAAGACACCGATGGAACCGAGACGAAGATCGCCAACATCGATAAGGAGCGTGACGCACGTCGCAAGGGAAGTATGAGATGGGCAGATGATCTTGATTTGGACCTCAGTAACGAGTTGTCCAGTAACGGATACATAAGTGACTCGTTGTTGAACTTCCCAGTGTTCAAACAAGAGCTTCCATCGCCTCCTCAGAAGCCTCCACAAcctcagcagcaacaacactcACAGTCCGctcatcaacagcaacagcatcaactccatcaacagcagcagcagcaatcttTGCATCAGCAAGCGTCAAGCTCTCAGGATCATTCAGCTCAACATCACGCCCCTTCAAGCTTGCAACAATCGTTGGGTCCCACCAACAGCGGAAATGCTGCCAACagccaccaacagcaacaggtgGTTCAGtaccaccagcaacagcagggcCAAAGTTCTATGAACGGTGCTGGACAGAGTTTGATGAACGCTACCGATCATCACGGGACGCCTATCGGTGCCGGTTTAAGCAATCTTCCAAGCTTTCTCCAGAGCAACCGACTGGAAAATGATCCCACCGGTGGAGGAGGCATTTTACAGATGCAGCAGGATGGCGCGTTACCGGTGGCACGTGGTGACAAAACACACGACGATCACAATCGGTTCCAGTACGTGCTAGCTGCCGCGACCTCCATAGCGACGAAAAACAACGAAGAATCTCTCACCTACCTTAACCAGGGCCAGAGCTATGAGATCAAGCTGAAGAAGCTTGGCGATCTGTCCCCGTTTCGGGGTAAGATTCTGAAGAGTATTATCAAGATATGCTTCCACGAGCGTCGCCTACAGTACATGGAGCGGGAGCAGATGCAGCTGTGGCAAGCGTCCCGACCCGGGGAGCGTATTCTCGATGTCGACATTCCTCTTTCATACGGATTGATGCAAATACAGCCTACCAGAAGCAACCTGCTGAACACGATCGAAGTGTTTTGGGACCCGATGAAGGAGGTCGGTGTGTACGTGAAAGTGAACTGCATTTCTACGGAATTCACCCCCAAAAAGCACGGCGGCGAGAAAGGTGTCCCGTTCCGGATACAGGTAGAAACCTACATCGATACTAATGGGCTTCACAATGGCACTGGCAATGGGGTGGCTGGTGGAGTCGGTGGTGTAGACGACAAGGACGGGATTAGACCACTCCATGCGGCGGCTTGTCAAATAAAGGTGTTCAAATTGAAAGGAGCCGatcgaaaacacaaacaggaTCGTGAGAAAATACTCAAGCGTCCGGTCGCGGAGCAGGAGAAATACCAGCGCAGCTGCGACTGTACGATACTGACGGATATTACGACCGATTCAGTCATTACGCCGCTCGGTGGCAACTTCAGTCCCGACCACATTAAGCGTAACGTGTCGCCATTATTGACCGGTCCCACGTCACCGGGGCAGTTGAACAAGTTCGAAAACATTATGTCGAGTGTGCTGTGCAATGGCGGGAACGTTGTCAGCCCGGGGGCAAACCCAACGACAACGACATCGACGTCGGCAGCGGCCGCCATGGTTGTGGTTGCTgcggcagctgctgcagccGGTGTACAGAGCAATCCGATCGGGATCAGTAACGTCAGCTCCACGAACGGGCTTTGCAAAGCATCGCCGCTGGGCGATCAACCGATCGGTGGTGTGCTTTCCCCGCAGCAACCGAGCGAACTGGACGATTACGTGCCGACCATTACGAAGGAAACCAGCCCGGGAACGTTGGCCCAATGGTTGGCCGTGCACCGGTTGTCTGCGTACGCGAAAACGTTCGCTCAGTTTTCTGGTTCGGATCTGTTAAGAATGTCCAAGGAAGATCTTTGCAAAATTTGTGGCCTTGCCGATGGTATTCGAATGTTTAACATTCTCCATTCGAAAGCCATAACACCACGTTTGACCATCTACGTAAGCTTCCAAACCAACATCTACCATGCCATCTATCTGCACTCGAACACCATCCCGGAGTTGGTGCAAAACCTGTCGAAAATTCCCGGCTTTCTGGAAGCAATCAACGCCCTCAACACACCCAACTCTACCACATCCGAGGCGGGACTGTGGAGTGGATCATTCGGGGTGCGTGCCGCCAGTGGCAGTGGGAAACTTCCCGGCAACAATGGTACCAATACCGGCGTACCAATTTCCGTACCGTCCCCTTCATCGCCAATCTCGTCCTCGTCAGGAATTGCAAAGTTGCAACTGCTCATTAAGGGTCCGAACGGTATACAGGTGCTGCTGACGGAGGATGTACTGCACAACATCAAGGACGAAACACTGTTCCAGCTCGAGCTGAAACCGAACGGTAACATACTGATGAAAGCCGTCCACAGTGTGACGGGGACTGCGGCCGATTGTTCGATTGATGACGATGTGAACTGA
Protein Sequence
MATVISLLSNLCNSPFDQQHSHHHHHSPQLLFPPYGQGPETLQQRYSGTGAGGRNRSNEATHHHQQHQLDALDFHLLSRTLEEEFEQMEYSGSSGPYQYQQQQHDQQQHQQQPARRQGQQDFEQISPGYNLDNEDTYSGSPNNFQDYQNNFVDSPPDSKEPWPIDYNKMHTTIASSSGANDTTNASTTVTAVAVATAAGTVAPVTSQQQQQQQQDNGGMYMNNAILPSRKRRMEWMSPQEEDTDGTETKIANIDKERDARRKGSMRWADDLDLDLSNELSSNGYISDSLLNFPVFKQELPSPPQKPPQPQQQQHSQSAHQQQQHQLHQQQQQQSLHQQASSSQDHSAQHHAPSSLQQSLGPTNSGNAANSHQQQQVVQYHQQQQGQSSMNGAGQSLMNATDHHGTPIGAGLSNLPSFLQSNRLENDPTGGGGILQMQQDGALPVARGDKTHDDHNRFQYVLAAATSIATKNNEESLTYLNQGQSYEIKLKKLGDLSPFRGKILKSIIKICFHERRLQYMEREQMQLWQASRPGERILDVDIPLSYGLMQIQPTRSNLLNTIEVFWDPMKEVGVYVKVNCISTEFTPKKHGGEKGVPFRIQVETYIDTNGLHNGTGNGVAGGVGGVDDKDGIRPLHAAACQIKVFKLKGADRKHKQDREKILKRPVAEQEKYQRSCDCTILTDITTDSVITPLGGNFSPDHIKRNVSPLLTGPTSPGQLNKFENIMSSVLCNGGNVVSPGANPTTTTSTSAAAAMVVVAAAAAAAGVQSNPIGISNVSSTNGLCKASPLGDQPIGGVLSPQQPSELDDYVPTITKETSPGTLAQWLAVHRLSAYAKTFAQFSGSDLLRMSKEDLCKICGLADGIRMFNILHSKAITPRLTIYVSFQTNIYHAIYLHSNTIPELVQNLSKIPGFLEAINALNTPNSTTSEAGLWSGSFGVRAASGSGKLPGNNGTNTGVPISVPSPSSPISSSSGIAKLQLLIKGPNGIQVLLTEDVLHNIKDETLFQLELKPNGNILMKAVHSVTGTAADCSIDDDVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00099456;
90% Identity
-
80% Identity
-