Adar005931.1
Basic Information
- Insect
- Anopheles darlingi
- Gene Symbol
- egg
- Assembly
- GCA_000211455.3
- Location
- scaffold:31742-36539[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.3 6.4e+02 -0.7 0.0 45 73 291 318 282 322 0.87 2 2 8.7e-15 1.8e-11 42.7 0.1 9 74 782 842 775 844 0.87
Sequence Information
- Coding Sequence
- ATGGATTTTCCAGCCTCCAAAAAGGCTGGAGATGAAACGGAAACTATTTTGTTAGAATCAGACGATGAAACCGAATCTCCAGCCACTGCGTCCAACATAGAAGCACCAGACACCACTCAGGAGAAACCCCTGGAAAATCCCAAAGAGCTGGAACAAGCTACAGAAACGCCCATAGCAGAAAAGCAGGAAGACGTGATCTTGATTGTGGACGACGAAAAAGAACCCGATAATCCCGGACAAGATGATGAACCCACATCGGAAGAACCTTCGACTGCAGAGCCGCAAGAAGCTGACTGTATACTAAATGATAACTCTGTTACCGATGCGCTAGCGTCTGAAATTGGAAAATTGTCCACTACTACAGACGGCCAGGATGTTGTGAAAGAAAATGTCGACGAGGAAATGCCAGAAGACCGCCAGGAACAGGAGAACGCTGCAGCATGCGACGAACCAAAACAGCAGGAAATGGCAAATGAAGTGCCGGCCACGCAACCGGAAGGTGGCGATGCGTTTGAGATGATGGTAGAGGCAACGATCGAAAATATTGCTGCAGCAGTGGACAGTAACTTTGAACTGGAAGCTGAACCCGGTGAAGTTGTCGACGAAAAGGTGACCCCGGAACCTGTTAAGGATGAGCAGACAAAACCCGAACCTACCCTCCCGCGGTCCGATTGCTGCAATCCGGAGTGTAGCTCGAAGTGCCGGGAGTACGTTGAGGCCCCTCTGTTCGCGATCAACTTTTACGACGTGTCGAAGAAAAAGAAGAAAGTTCCACTTTTATGTACCGATTGCTTCGGAGCAGTCATCAGAGAGTACGAGAATTATTGCTCAATGATAGTGAATCAAACTCCAGTGGTTCGGCACAATCCGACCAAAAAGGAGGTAGTGGAAATTATAGATAGCGATGACGAGGACAAAGATAAGATTGACCTGCTAAAATTTGAAAATGAAATACCATTGCATCAGGACATAATAGCACTGGTCGAAGCGGAACTGGAGGACGTCATAAAAGAAACATTCGATAAATACAAGATACAGGAACAGGTGGAGGAATCCTTCGACTACATTAAACAGATAATTGCGAAAAATGAAGATTGCTCCAAATTCCTTGAACCTACGTTTAAACAGATATCGAAGAGGGCGGACGAACACCTCTTTGCCATTTACGCTGCCAGAAAATTGGAAATAAAACAGCTTCCCGAACTAATCATCGGCAACGACCCCAACAGTGACATGCATCGCCGAGAGCCCATAACCCAGAGCCACGTGTATTACGCTGCTGGCGATAAACTGTTTGCCAAGTGGAATGAGTGTCGAGTGATAGATAAAGTGAAGCGAAATAACGAAATTATGTACTATATCAAGTTTCTGCAACCGGAAGGATCTATGTTGCAGTTACGATCAGCCAAATGTATTGCCTACCATACGGCGCCGATAGGAAAGCTGATGCTCGGGACGCGTGTAATTGCTAAGATTGAATCGTACGTTGGCAAGGGTGGAAATGTGCAAGACGCGTTCTACCCGGGTGTTGTCGGTGAGTCGCTGGGCAGCTACAATCGCTACCGATATCTAGTTTTCTATGACGATGGATACGCCCAGTACCTGCCACCCAAAGACGTTCGAGTCGTCTGTTTCCAATCGAAGAACGTTTGGGACGATGTGGATATCCATTCGCGCGAGTTTATCAAGGACTACCTGATCAAAATTCACAAGATCAGGCCGATGGTGCACGTAAAACCCCAGCAGCGACTTATGACAGAGCGAAACGCTACCTGGTACGATACAATCGTAACGCGGCTTGATGCCAGCCTGATTGAGGTTTACTTCCCCGCGTTAAAGCGCCATGAATGGATTTATCGTGGCTCCACTCGGTTTGCTCCGCTGTTCTACGGAATAAATCAGCAACACTTCGGCAACAAAAAGTACTCCAAACTTCAGCAACGTAATGAGCCGTCAATAGAGTACATGACAATCGATGACGACGAAGAGGAGACCGGCGTCGGAAATGAGGGTACCGCGAGAAGCAGCTCCGACATTATGGGTCAAAAGCCCATCGGCCCAGTGCCATCGGCGGCACCGCAAGACAGCAAAGCGCCGAAAGAAGCTCGCAGCGACGTTGGAGGTAAAGCGAAACAAGCGCAAACGGCCCGGAAAAGCACGGTGGATCGGCCTACATATCTCAACCAAAGCATCATCTATTGTGATAACGATCGGCCAGAGGGATCTACGACGAACTACACGACGAAGCGCTATCCACCACCGCAAAAGTTCAAACCGCACAACTGCGGACCTACCTGTCTGTACAAATCGTCGTTCGATATGCGATCATTCAGCCACCTCGGTAAGCCGCTGCTCTGTGGATGGGAGCGACAGATTTGCAAATCTCGCTTCAAGAAGGTGCCCAGTGTGGTGTACCGAGGTCCGTGTGGTCGTCGTATGCGATCGATGGCGGAGGTGCACCGTTACTTGCGCATTACGAAGGCAACGCTGAACGTCGATAACTTCGAGTTCGATCCACAGCTGCGAGTGTTTGCTGAGTATCGTCCACAATACCTCGTGGTCGACATACCGGACGTTTCGAATGGGCTCGAGTACACGCCCGTTTCGTGTGTGAACTATTTCGACGATACAAAACCGCCGCCATGCGAGTACTCAACCAAGCGCATACCCACCGAGGGTGTGAACCTGAATTTGGACGAAGATTTTCTGGCCTGCTGTGACTGTGAAGATGATTGCTTCGATAAAAGCAAATGCCAGTGCTGGCAGTTGACGATCGAGGGCGCGAAATTTCTGTCACCGGAACAACCGATCGAATCGATCGGCTACGTGTACAAGCGGCTGGAGGAATCGGTCATGACCGGCATTTACGAGTGTAACGCGCGGTGTAAGTGCAAAATGGATTGCCTCAACCGAGTTGTCCAGCACCCGCTCCTTACGAAATTGCAAATTTTCAAAACCAGCAACAGGGGCTGGGGTATTCGTTGCCTTAATGATATAGCCAAAGGCAGTTTCATCTGTGTGTACTCCGGTCACCTGATCACGGATGAGGCGAGCAATGAGATTTGCGCCCAGAACGAGGACCAAACTGGTGACGAGTATTACGCCGAGTTGGACTACATCGAAACGGTGCAGAACACAAAAGAAGGGTACGAGAGCGATGTATCGAACATCGAGGAAGAGGAGGAGGATGAATTACAAGATAAGAACAGCCAAAACGAGGATTCTGATTCTGCGCCCGACTATGGAGCCAGCAACGTGGAACCCGATTCGGACGAAGAATTCACCTACACAAGCAAACCATCGCGTATGGTGGTCAAGACACGATCTCAGATTCGTAAACTGGTAACAGAAACGCAGGATGATGAATTGACTGGTGAGAAACGAAAGGAAAAAGATTCCGGAGAGCGCGAACCAATCAATCTCGCACCCAACATGGAAATGTCGCAAGCAGAGGCGCTGGGCAAAACTAAAAAGAGAAAATCTCTTCGCGAATACTACGGAGAGAACGAAGCCACCTACATTATGGACGCCAAAAAGTCGGGCAATCTGGGCCGCTATTTTAACCATTCCTGTGTACCTAATCTGTTCGTCCAGAACGTGTTCGTCGACACGCACGATGCCCGGTTTCCGTGGGTGGCCTTCTTTGCGCAGAAGTTGATAAAGGCCGGCTCGGAGTTAACGTGGAACTATAACTACGATGTCGGCTCAGTGGCCGGCAAAGTGCTCTACTGTCACTGCGGGGAAAAAGAATGCCGTAAGCGTTTGCTTTAA
- Protein Sequence
- MDFPASKKAGDETETILLESDDETESPATASNIEAPDTTQEKPLENPKELEQATETPIAEKQEDVILIVDDEKEPDNPGQDDEPTSEEPSTAEPQEADCILNDNSVTDALASEIGKLSTTTDGQDVVKENVDEEMPEDRQEQENAAACDEPKQQEMANEVPATQPEGGDAFEMMVEATIENIAAAVDSNFELEAEPGEVVDEKVTPEPVKDEQTKPEPTLPRSDCCNPECSSKCREYVEAPLFAINFYDVSKKKKKVPLLCTDCFGAVIREYENYCSMIVNQTPVVRHNPTKKEVVEIIDSDDEDKDKIDLLKFENEIPLHQDIIALVEAELEDVIKETFDKYKIQEQVEESFDYIKQIIAKNEDCSKFLEPTFKQISKRADEHLFAIYAARKLEIKQLPELIIGNDPNSDMHRREPITQSHVYYAAGDKLFAKWNECRVIDKVKRNNEIMYYIKFLQPEGSMLQLRSAKCIAYHTAPIGKLMLGTRVIAKIESYVGKGGNVQDAFYPGVVGESLGSYNRYRYLVFYDDGYAQYLPPKDVRVVCFQSKNVWDDVDIHSREFIKDYLIKIHKIRPMVHVKPQQRLMTERNATWYDTIVTRLDASLIEVYFPALKRHEWIYRGSTRFAPLFYGINQQHFGNKKYSKLQQRNEPSIEYMTIDDDEEETGVGNEGTARSSSDIMGQKPIGPVPSAAPQDSKAPKEARSDVGGKAKQAQTARKSTVDRPTYLNQSIIYCDNDRPEGSTTNYTTKRYPPPQKFKPHNCGPTCLYKSSFDMRSFSHLGKPLLCGWERQICKSRFKKVPSVVYRGPCGRRMRSMAEVHRYLRITKATLNVDNFEFDPQLRVFAEYRPQYLVVDIPDVSNGLEYTPVSCVNYFDDTKPPPCEYSTKRIPTEGVNLNLDEDFLACCDCEDDCFDKSKCQCWQLTIEGAKFLSPEQPIESIGYVYKRLEESVMTGIYECNARCKCKMDCLNRVVQHPLLTKLQIFKTSNRGWGIRCLNDIAKGSFICVYSGHLITDEASNEICAQNEDQTGDEYYAELDYIETVQNTKEGYESDVSNIEEEEEDELQDKNSQNEDSDSAPDYGASNVEPDSDEEFTYTSKPSRMVVKTRSQIRKLVTETQDDELTGEKRKEKDSGEREPINLAPNMEMSQAEALGKTKKRKSLREYYGENEATYIMDAKKSGNLGRYFNHSCVPNLFVQNVFVDTHDARFPWVAFFAQKLIKAGSELTWNYNYDVGSVAGKVLYCHCGEKECRKRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092163;
- 90% Identity
- -
- 80% Identity
- -