Acul013383.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles culicifacies
Gene Symbol
PAXBP1
Assembly
GCA_000473375.1
Location
KI422766:20792-35292[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-36 1.7e-32 112.8 0.3 3 271 676 884 674 886 0.94
2 2 0.28 2e+03 -2.2 0.0 52 114 1179 1239 1175 1251 0.79

Sequence Information

Coding Sequence
ATGTCGCTTTTCCGGAAACCTAAAAAACCTATCCAGCGACGCGTTTTCAGCGGCTACGATGATGAGGATGAAGAAAACCATAACGCAGCTGGCAGGGATACGGGCGCAAACAGCTTCAACAATGGGAGTGACAATGGCAGCGATATCAATCGTTCCGTGCCGATGGACACCGACCCCGCACCGGAAGGTCCGGCGGTAGCGGTTGTACCGCCGACCGGGTCGGAACACCGCAAGCGAAAAGAACACCGTGCAGAAACATCTTCCTCTAAGGGCTCGTTGAAAGCGATTCCGAGCACCAAACCCTCTTTGCTTAGTTTCGACGACGAAGAGGAGGGCGAAGTTTTCCAAGTGAAAAAGTCCTCCCACAGCAAGAAGGTGATGAAAACGCTCGACAAGGAACGGCGCCGGAAACGACATCTGGAGAAGAGCAATGGTACACAGACGACGGCCCAGAGCGGATATGGCGTGGATCAGGGAAAATCGAACGCCTCTCGCAAGCAGCAGTACCATACGTCTTCGTCGCCACCCTCGGTCACGGGGCCGTACGGTCACGACAATAATGATAAGATAAAAAGAGAAAAGTGTGAAAATTCTAGCTCTAATATCCAAACAGAAATACGCACAGACGACTTTGTGCTGGTGGTTAAGAAGTCGGACCCTGAGAATATGATACTGAACGGTCGGGCAGCCCTGTGTGCCGGACGGAACGATATGTCCTCGGAGGATGAAACGAACGAGGAGGACGAATCCGATGGCCGAATGCACCATCACCATCGGTTTGCGAAACCGCAGGACAACTTTAAGATGTGTCTCGAAAACGGTGTTATACCGGATGCGGCCATGATTCATGCCGCTCGCAAGCGACGCCAGAAGGCTCGCGAGCAAGGTGAGTTTATTCCAGTAGAGGAACCGAAGGAAGACAAGAATAAAAAGCGAACCGTACAAGAGGACGGCGACGGTGACGGATCGGATGAGGATGACGATCGTATCGATATGTCCGCTATAACCGGTGCCAAAGAGCGTGAAGAACGACGGGAACAGTTTTATGCCGTACAGCGCGAAGATTCAGACGCGGAAGATTCTGATGTCGAGACTAAGGAGTGGGAAAACCAGCAAATACGCAAAGGTGTTACCGGGGCTCAGCTAGTTTCGGCACAGCAAGAATCCGTAATATCCCAGTACTTAATAGGCACCAACTTCAGTCAAACGTTCCAAAACAAATCCGCTCTGCTGATGGATGATCAACGGACGGGCGATGTGAGCAACGAGCTGCGTGGCCTTTCAACGGCTGCCCTGCTCGAGAAAGCTTACGCAGCGACCAGTGGTATCCGGCTGGCTGGCGGTGGTAGTAAGCGAACGAATGCATCCAACAGTGGTAGTGGTGGAATTGCAAAAACAACCGACACGAAACCAACCGGTCCACGGATGCCACAGCAGATACTGGCACAGCTGACCGATCGGCACCGAACGACGGCGGAACTGAACCGGAAGCACGATGACGATATCAAACAAATTACGCAGGAAATCAAACTGCTCGGGATGGATCATTTGTCGTGCGAGCAGAAGGCACCGGTTGCTGCGGCCAAGTACCGGTTTTATCAAGAGTTCCGCTGCTATGTGTCTGATTTGATCGAGTGTTTAAATGAAAAAGTCCCACTAGTGACGGCACTCGAGCAAAAGGCACTCACCTTGCAAGGGAAACATTCGGGAATGCTTATCGAACGCCGGCGTCAGGATATGCGCGACCAAGTGAAGGAAGTATCCGATGCAAACAAAGGAATCAAACGAGTTGGTCCCGAGGAGCAGGAACGCGTACGGCGAGCAGCTGAACGGGAGGGACGTCGCACACGTCGTCGACGGGATCGCGAGAAGAATGAAACGGCCGAAAGTCACTTCGACGGCATGTCCAGTGATGATGAAATCCCAGACATGGAAGCAGCCCGCTATCGATCCGCACTGCAAGCGATTGAGCTGGAAGCGAGAGAGGTGTTTGTAGATGCGGCCGAGGAGTATGGCGAGGTGGCCGGTATTCTGGAGCGGTTCGAGCAGTGGCGCCAACACGATATGCCCGCGTACAGTGACGCCTATGTGAGCCTTTGCCTGCCGAAGATTTTGGCTCCACTGATCCGTCTCGAGCACGTCTGCTGGAACCCGCTAACGATGGACGCTTTGGTGGAGCTGGAGAACGAGAAGTGGTACCGGACGGTCGCTCAGTACGGTTGCTCAGCCACGACGGAGGCGGCGCTGGCAGCGGATCCAGACGTTCGGCTTATACCGACGCTGGTGGAAAAGATATTCCTGCCAAAGCTGACGGCACTGGTCGAACAGTACTGGGATCCGCTGTCCACGACGCAAACGTTCCGGTTGGTGCGATTGCTGAAACGATTCGTGCGCGATTATCCATCGCTAAAGATCACCTGCAAACCGCTCCGGGTGCTCTTCCAAGCAATTCTCGACAAGCTAAAGCAGTCGATCGATAACGATGTGTTTATTCCAATCTTTCCCAAACAAGCGCAAGAGGCAAAGTCATCCTTCTTTCAGCGTCAGTTCTGTAGCGGTTTGAAGCTACTGCGCAACATCACCAGCTGGCAGGGCATTTTGGCCGACGCTGCACTGAAAGAGCTCGCGATCGGATCGCTACTGAATCGATATCTGCTGAACGGGATGCGCGTCTGTTCGCCGGTGGATGCGATCGCGAAAGCTTCCACCATCGTGTACACATTACCACGCGTCTGGCTCAACTCGAGCACGACAGTCGTGCAGAACATGGATCAGTTTGTCACTATGTTACAGCATCTGCAATCTCAGCTTGATCCTGCCCTTCCACAAAATGGCAATTCCGTAGCAGGACCCCGCTTACTGCCTGGATGCAAACCGTACACATACAGTGCCGCTTCAGAGTCAGTTGCTCCGTTGGGCCGCGAGAACACAGACGTCACGACCATGCTGCCGTTGTTCAGTGATCGCACGAATGCGTTCGATATCTTTCCCCCAAACTACGACATTCGGTACCGGTTGGAGACGGATGTAACTCTCGTACCGGATGTACATGCGACCGACAATTATATGTGGTATCTGAACGGTTACCTGCGGGTCCATCGTTACGATGCTCGGAATCTTGCCGCTCAAATCGAGCTCGATCGGCATCACATCCCGCAGAGTGAAGGTGATGTTTCTGCACTGCTGGAACCGTTCCGTATCGCGATCGGCAACGACACAATTCTAAGCATTCAGTTCAAGCTGAATGAACCGATCTGGTCGGCGAACATCAAGCGTGCACTGGCGTCACTGCTGCAGGCGCATGGAGATGGTCCCGGTGCGTACGTCGTCGATGAACAGGGCATCTTTGGCAGCTGTCCGACCGAATACTTTGTCGTGAATAAATCGAACGTGTTCGAGATCTCCAAAACATACGGCATGGACCGGTGCACCATCTACCGCGGTGCGATCTATTTGACGCGCAGCAATATCCCGCAGAACCACTGCATCCCGAACAAGCAGCCACAGGCGATCACGTCTCGTATCGCTAACTACAAGCTGCGTAAGATCGAATCCTATCGCTACATGCTGACTGAGCTGGATGGCACAATGCGCACCAACATTCGCACACTGGAGTCTTATTATCCTCAGTTCCTATACTCCCGCGTGGTTCTACGCTACGAGCAGCATCAGGTTTTGGATGGTGCGCCCAGTCGGCCGGTGGTGGACGTTGTCAATGGGATGGCCCTTCTCTTCAGCCCCATCCTGTTCGATAGTCCCGATCTCGAAGCGACCGGTGGCCGAAGTCCAAAGTCGAAAGAAAAGCTTATAAAGCGTACCGCCAGCCTGCTGAATGCTATGGCCGACAATCTCGAAACGGTCGACAATAAGCTGAAGGAACCGTACGATGAGACGGTGTCGGAAATTATTCGCCTGATGGGCACGATGGATCTAGAGACGTTGAAGCAGCTGTACGAAGAGATTGATCTCGGCACGTCATACCGCCAGGAAACGGCACGGAACATCTTTCTCGAGATAGTGCCGCGTACCGGTACGACTTCCACAATACTGCTGACGCGCGATCTCATCATGAACAAGCAGGTGAACCCAATGACGGCCGTCCAGTTGCTTATTTCGCTACCATTCTATATGGCGGAACCGTCACAAGAGCTGGTAAAGGAATGTGAAGTGTTTCTGGAAGTTGGTGCGGATCGGCCCGACATTAAGCATGCGGCCGTCCTCAGCTACGCCACTATGATCTACAACACGTTTGTGGCGGGTAAATTGACTGCGGACACGTTCGAGAAGTACGTCAAAATGTACTTCGATCTGTTCCTGAACAGCTTCGAGTATGAGCAGCAGATGCTCTACCTGGAAGGGTTAGGCAATCTGCAGTTGGAAAATGTGGCCGAATATTTGGATCCAATCATTCGGGCAGACTACCCACAAAACACCGATATACGCTTTCTAGCCATGCTCGCTCTGCTACCGACAGCACATTTACGACCGAATCAAGTGTACGAGACGTACTGGCCTATCTTTCACTCTCGCACCAGCCCATTGCAGTTGCGAGTTGCGGCGTTCACGATGTTGTTGTTCTCCAATCCTACTCCAGGCCGGTTATTGGGTCTCTACAGTGTGATTAAGACGGAAAACGATCCGCATATGATCAATTTTTATCGCACGACGGTACTAAGTATCTCCGAAACGACCTATCCTTGCTACCAGCATCTCAAACTATTACTTGCGTATATGACTCGCCAACTACCGGATGCACCTGCGCCCAAGTATTGGGTCACTGGTAACTATCTGTTTGATTATCGTGATCGTAAGTTCCATATCGGTTCGATGCTGCAGACCATGCTGATCGGTAGTCATCAAACGGATCTTCCAATGATCGCATCACTCAAGTTCGATACGGAAGCTCTTGGGAGGTTCACGGGCCAATTAGGGCTGTACATTAAAGCGCGTGGATTGAGTGACGCTGTCATCAATCGGCTCACTACGTTCAACTCAAGCCATCTGCGGTTGGATCGATTGAGCAGCATTCTAAAATCGATGAAGCTGTCCACCATTAGTCCAACGCCTTTGCATTTCGAGTTCATCGTCCAGTTCGAGGGCAAAGCCGTTCTTTGTTATCATCTCAATCAAACAACATTCCACAACCTAACCGATGGAAACATCATCAATCGGATCAATCTACTCAGAGATAGCCACGTAAATATGCAGATCGTTCGACGACCCTTCATGATCAAGTACGCTCTCCCTACGCTGCTAGGCACACCAGCTGATATTCTTATCGAGAACACCGTATTGGCGACGGTCCGCGGGAACACCACGCAGCAGATGATGCTGATGGACAAGGTGGCACGCAGCAACCAGGTAGACATCCGTTACTCTTCGTATGCGGTTGTAAAAATTCGCAGTTACAACCCCATCAACGATGTGGAATATTCAACCATACGTGAGCAAGGTTTCCTCGTGTACATACCGGTGAACAATGAAATCGTATGGGATATTGCGGGAAAATCTATTAGTTACAGCTTCTACCGCCCGGAGAACATGACCAGCGGGATATCACTGAAGAGTCGCACACGCAACACGCCGGCGAACGGATCAACGGCAGCGGAAACTCTCGAACCAAAGGAGGAAGATATCGCCAAGTACGGGTACCGGATAGACGATCTGGGAATTCAGCTGCTGGCTAGGGTACATCAGGATTACACCAAGGATAACGTGATGTTCATGCTCGAAACGGACATACTGGACAATGCAAAGGTCCTTACGAAAGCCCCATTCTCGCTTGTCAACAACTTGCTGCGCATCATCAGTCTGATTCAGCTCAACACGATCCACATCGGACGGGACAAGCACCTGACGCTGCTGATTGCAAACGATCAAAAAACGCTCCTGCAAGGTACGCTCAAGTGGGACACCCAGAACTACTCCAAACAACCATCCGTACCGGAAAACGAAGTACTGCGGGTAAATCTGATCCTTGCCCATACCATTCCCAAACCGGAAGGGAGTCGCGACGAGGTAAAGGTACTGCACAAGTGGGACATCGTGTCGCAGTACACCAACTTCAAGTGTGACCGGGCGGCACAGATTTTCTTCTCACTTACACGCCACGAATGGAATAGTTCGCACTGGAAGATGTGCTTTTCGGCGGATTATCGGCCGCTGGTATTCCTGCAACGTCCCTTCCAGCTTACGGGGGAGGTCGTGTTCGGCGAGACAAAGGTACCGAAACAGTGTCCCAAAGAACCACGGATTGCATTCAATGTTTCCTATCATCTGCCGGATTATGTGGAGCGAATCTACCATGCCCTTGACACGAAGGACCGTAGCTGTCCGAAGGAAATTCTACGCCTTACACCACCTCCATTTTCTGGCGATTGTCGTGCGGATCGGTTCAGTCCACTGACCACGGTAACCGGACTCGATGGACACTTTACGTTCACCAAGCTTCCTTCCTGGATCGATATGCTGTTGCACCGGCTGGATCATGCTGTATCGGCCGTTGTGCCTGGACGGGTGCATACACTCAACATGACCGACCATATCAATGTGCAAGCCCGCGTCCTGCAGTGGTCGAATGATACAGAAATCCAGGTCAACGGGGGCACTATTTGGTTCCCTTCGCGGTTCTATCACAATGTAAAAATGCAACATTCCTACACGTCTCGGATCGAGTACGGCTTTCTCAGTGTCTGCAGCCTGGTCCACAACAAGTTGACAACATTTAACGATCGTATCCTGGAGCTGACCAATGAAGTTCGGGACGAGTACAGGGTACGCGATAGTTTTCTGCTTACCGCCGACTGTTCACTCACACCCAAGATGGCCATCTTCGTGCTCGATGATCAGAAAGGCGTACAGATCTACACCGGCGGCAACTATTTGATCTACGAACCGGATTCGGGGGCAGGGCTCAACAGTAACGGCAGCACTTTGTTGTCTACCATGACTGTGAACATTAACGACGAGCAGCTGATCGACCTGCGCAACATCGTATATCAGTATCCGCCCGATGACGAATTCTACGATTTCCGGGTGTACATCGATCGGGAGGGTGTGCTGGTAGTGGAAAACCAACTAAATGGAGCCGTCGTACAGTATGGACCCAAGGGTATTGTGAATCTGCTGCTTCCGACCGTACACAAGGGCCAAATGTGTGGCCTGTGCAGTGATCGCGAGTAA
Protein Sequence
MSLFRKPKKPIQRRVFSGYDDEDEENHNAAGRDTGANSFNNGSDNGSDINRSVPMDTDPAPEGPAVAVVPPTGSEHRKRKEHRAETSSSKGSLKAIPSTKPSLLSFDDEEEGEVFQVKKSSHSKKVMKTLDKERRRKRHLEKSNGTQTTAQSGYGVDQGKSNASRKQQYHTSSSPPSVTGPYGHDNNDKIKREKCENSSSNIQTEIRTDDFVLVVKKSDPENMILNGRAALCAGRNDMSSEDETNEEDESDGRMHHHHRFAKPQDNFKMCLENGVIPDAAMIHAARKRRQKAREQGEFIPVEEPKEDKNKKRTVQEDGDGDGSDEDDDRIDMSAITGAKEREERREQFYAVQREDSDAEDSDVETKEWENQQIRKGVTGAQLVSAQQESVISQYLIGTNFSQTFQNKSALLMDDQRTGDVSNELRGLSTAALLEKAYAATSGIRLAGGGSKRTNASNSGSGGIAKTTDTKPTGPRMPQQILAQLTDRHRTTAELNRKHDDDIKQITQEIKLLGMDHLSCEQKAPVAAAKYRFYQEFRCYVSDLIECLNEKVPLVTALEQKALTLQGKHSGMLIERRRQDMRDQVKEVSDANKGIKRVGPEEQERVRRAAEREGRRTRRRRDREKNETAESHFDGMSSDDEIPDMEAARYRSALQAIELEAREVFVDAAEEYGEVAGILERFEQWRQHDMPAYSDAYVSLCLPKILAPLIRLEHVCWNPLTMDALVELENEKWYRTVAQYGCSATTEAALAADPDVRLIPTLVEKIFLPKLTALVEQYWDPLSTTQTFRLVRLLKRFVRDYPSLKITCKPLRVLFQAILDKLKQSIDNDVFIPIFPKQAQEAKSSFFQRQFCSGLKLLRNITSWQGILADAALKELAIGSLLNRYLLNGMRVCSPVDAIAKASTIVYTLPRVWLNSSTTVVQNMDQFVTMLQHLQSQLDPALPQNGNSVAGPRLLPGCKPYTYSAASESVAPLGRENTDVTTMLPLFSDRTNAFDIFPPNYDIRYRLETDVTLVPDVHATDNYMWYLNGYLRVHRYDARNLAAQIELDRHHIPQSEGDVSALLEPFRIAIGNDTILSIQFKLNEPIWSANIKRALASLLQAHGDGPGAYVVDEQGIFGSCPTEYFVVNKSNVFEISKTYGMDRCTIYRGAIYLTRSNIPQNHCIPNKQPQAITSRIANYKLRKIESYRYMLTELDGTMRTNIRTLESYYPQFLYSRVVLRYEQHQVLDGAPSRPVVDVVNGMALLFSPILFDSPDLEATGGRSPKSKEKLIKRTASLLNAMADNLETVDNKLKEPYDETVSEIIRLMGTMDLETLKQLYEEIDLGTSYRQETARNIFLEIVPRTGTTSTILLTRDLIMNKQVNPMTAVQLLISLPFYMAEPSQELVKECEVFLEVGADRPDIKHAAVLSYATMIYNTFVAGKLTADTFEKYVKMYFDLFLNSFEYEQQMLYLEGLGNLQLENVAEYLDPIIRADYPQNTDIRFLAMLALLPTAHLRPNQVYETYWPIFHSRTSPLQLRVAAFTMLLFSNPTPGRLLGLYSVIKTENDPHMINFYRTTVLSISETTYPCYQHLKLLLAYMTRQLPDAPAPKYWVTGNYLFDYRDRKFHIGSMLQTMLIGSHQTDLPMIASLKFDTEALGRFTGQLGLYIKARGLSDAVINRLTTFNSSHLRLDRLSSILKSMKLSTISPTPLHFEFIVQFEGKAVLCYHLNQTTFHNLTDGNIINRINLLRDSHVNMQIVRRPFMIKYALPTLLGTPADILIENTVLATVRGNTTQQMMLMDKVARSNQVDIRYSSYAVVKIRSYNPINDVEYSTIREQGFLVYIPVNNEIVWDIAGKSISYSFYRPENMTSGISLKSRTRNTPANGSTAAETLEPKEEDIAKYGYRIDDLGIQLLARVHQDYTKDNVMFMLETDILDNAKVLTKAPFSLVNNLLRIISLIQLNTIHIGRDKHLTLLIANDQKTLLQGTLKWDTQNYSKQPSVPENEVLRVNLILAHTIPKPEGSRDEVKVLHKWDIVSQYTNFKCDRAAQIFFSLTRHEWNSSHWKMCFSADYRPLVFLQRPFQLTGEVVFGETKVPKQCPKEPRIAFNVSYHLPDYVERIYHALDTKDRSCPKEILRLTPPPFSGDCRADRFSPLTTVTGLDGHFTFTKLPSWIDMLLHRLDHAVSAVVPGRVHTLNMTDHINVQARVLQWSNDTEIQVNGGTIWFPSRFYHNVKMQHSYTSRIEYGFLSVCSLVHNKLTTFNDRILELTNEVRDEYRVRDSFLLTADCSLTPKMAIFVLDDQKGVQIYTGGNYLIYEPDSGAGLNSNGSTLLSTMTVNINDEQLIDLRNIVYQYPPDDEFYDFRVYIDREGVLVVENQLNGAVVQYGPKGIVNLLLPTVHKGQMCGLCSDRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00095070;
90% Identity
iTF_00095070;
80% Identity
-