Acou016292.2
Basic Information
- Insect
- Anopheles coustani
- Gene Symbol
- lrrfip2
- Assembly
- GCA_943734705.2
- Location
- OX030902.1:11093655-11104006[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-110 3.9e-106 354.8 34.9 1 299 246 544 246 545 0.94 2 2 0.097 9.3e+02 -1.0 2.6 210 246 564 599 548 618 0.59
Sequence Information
- Coding Sequence
- ATGGTGCAGCTGAAGGTGCAGCAGAGTTCACTGGTCAGCAAGCTGGTCCAGCATCAGTGGGGCCCTTCGTTGAGCGACTGTCTGGAGCTGGAAGCCGCCTGCCAACCCAAGGGGCTCGCCGTCAAGGGAACCTGGCGCTATCAGGCGAACGATGATGACGCTAGTGACAGCAGTAGCGTGGGTGACATTTACGAGCTGGCGCACAGTGAACTGCACGCGCCGTCGGGCCCCGCGATCGAAGAGGGTAATGGGGTCGACGCCGTGAAGCCACCGCCGTCGCTGGAGTTCGACAAAACCGCTACCAGCGACGGCGGATCGGTCGACATTAACCGCAATCGGATCGCCGAACCGGGGTTCGACGGGCTGGAGGATCGCTCGCTGACCAGCGTGTACAGCGACGCAGGCGTCGAGCAGGTCCTCGGGCGTCGAGCTAGCTTTGAATGTGACCTACCTTCACCCGACCAGCACGACGACGGTGGACCACAGCCCCACTCGGAGGAGCTCTTCGACCGGAGCGATGACAGCCGGAACAGCAGCAGTCTGCGCAGCGACAGCTACCATGACTCCTCGTCCATGCACGAgccgcaccagcagcagcacggagGCCACGGGCACCATCCGTCGTACGAGCCGCACCGCCAGCACCATCGCCTCTCGGTTAGTCACACCGGCGACGAGTTCAGCTCCGAGGAGGACGATGCGTTCGTAGAGTTGCTCGAGCGGGCGAATGACATCGCGGAAGCCCGGTTAGCAGCCAGGCGGCAGGCAAGGGCGGAAGCCCGCGAGATACGTATGCGCGAGCTGGAGCGCCAGCAGAAGGAGCTGGAACAGAATGCGGACCGGGTGTTCGACCTGCAGCAACAGTCGATCGGACTGTCCGGCGAGCCGGTCAGTCTGGACCGCACCTCAACGCCGCGCTCGAGCCGAATGATGGCGCAGGGATCGGCCAGTGCGGCGCGCGGCAGTGCCCTCTCGTCCCGCCGCAACTCGGAGGATTCGCTCGAGGAGGAGGCACGCAGCTTACGCGATCTACGGCACGAGCTAAAGGATGTGGAGGAGCGGTTCCGTAAGGCGATGATTGCGAACGCGCAGCTAGACAACGAGCGGTCGTCGCTCAACTACCAGATACAGCTGCTGAAGGACAAGCTGGAGGAGATGGAGGAGTCGCACACGCAGCTGCAGCGCGAGTATCGGGAGAAGTGCCGCGACCGGGAGGCGCTCAAGCGCAACAACGACAAGCTGAGCGAGGAGCTGAAGCTCGTCCAGGGCCAGCTGCAGGAGCGGGACGCGCTTATAGAGCAGTACGGGCTGGTCATAGTGACGGTGGAGAACGAGGACGGTACCGATGCGCATCGCGCCCTAGTCACAGCGGACAACGCACAGTTGCTCAAAACCGTACCGGGTTCGTTAGACGTAAGACTGAAGAAGTTTGCCGAGGAAAAGCAGGAACTACAGAGCGAGCTGCAGACACTGCAGCAGCAACTGAACGACTTCAAAAGCAAGGGCCGCCGGAATACCTGCTCGAACGGGTTCGGTCTGGCCGACGACGACTACGAGGACGCGCAGCGCGAAGCCAACAAGCTGATAACCGAGTATAAATACAAACTGCAGAAGGCGGAGCAGGAGATTGCGAACCTGCAGGCCAGCCTTGCCCGATCGGAGACGCAGGTGATTCGATACAAGAGCACCGCCGAGGCAGCCGAGAAGGCCGAGAGCGATCTGAAGATCGAGCGGCGAAAGTTGCAGCGGGAGAATCGCGAAGCAATGGACCGCCTTGAGGAGCTGGAAACATCGAACAACCATCTGCTAAAGCGGCTGGACAAGCTAAAGAACGTCAAAAGCACTATTATGAAGGACATTTGA
- Protein Sequence
- MVQLKVQQSSLVSKLVQHQWGPSLSDCLELEAACQPKGLAVKGTWRYQANDDDASDSSSVGDIYELAHSELHAPSGPAIEEGNGVDAVKPPPSLEFDKTATSDGGSVDINRNRIAEPGFDGLEDRSLTSVYSDAGVEQVLGRRASFECDLPSPDQHDDGGPQPHSEELFDRSDDSRNSSSLRSDSYHDSSSMHEPHQQQHGGHGHHPSYEPHRQHHRLSVSHTGDEFSSEEDDAFVELLERANDIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDLQQQSIGLSGEPVSLDRTSTPRSSRMMAQGSASAARGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEMEESHTQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQYGLVIVTVENEDGTDAHRALVTADNAQLLKTVPGSLDVRLKKFAEEKQELQSELQTLQQQLNDFKSKGRRNTCSNGFGLADDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSTIMKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00107684;
- 90% Identity
- iTF_00107684;
- 80% Identity
- iTF_00109141;