Basic Information

Gene Symbol
Trerf1
Assembly
GCA_943734705.2
Location
OX030901.1:9696433-9741072[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-09 9.1e-06 25.8 0.0 2 45 1646 1690 1645 1691 0.90

Sequence Information

Coding Sequence
ATGGTGCGACCGGAATCCAATTACTTTTCGAAATGGCCTGGCCAGAAACGGGCCGGTTTTGAGAAGCGGCGAAGGCAGCATCTCCAAGCGCAAGTGGCCTCCGCTTGGCGTCGGGTCCAGAACAGTATCCGGTTGCCGCTGGCCGGCCTGGCCCCTCCCCGCGTGTTGATGTGCAGTGCCTCGATGGGCGCGGAAGGATCGGTCACGCTACAGCTGCGCGAAGCCGTCCCGGCACCGGATGCGACCGGTTCGCTCGATGGCGCCCTCACGATCGGCTATCCGGACTCGGAGATGCTGGCCGACATGCTCGGCACCTTCCAGGGTGCCTCGACTGGCGGGGCCGACTCCGACGGTGGCAGCTTTGACCTGCTCCAGGACACGGGCCGGACGGCGGCCGAACAGATCGAGCACATCCTCACGAAATCCACCGCTTCCAGCTCGTCCTCGCTAGGCACGAAAGCAGCCACGGAGAAAGCGAATGCAATCACCAACCGCCTGAGCAGCTCGTCCAGCACCAGCTCGTCGccttcgtcatcgtcgtcgtcgttgtcgggcGTTCTGCATCACGGCACCACGATGGTGACCGTGAAAAGTGCCGCCAGTGGCAGCAGCCCCAGCGCCAGCATTGCCGCGGCCAGCCccaccgcctccaccaccagcctTGTCCTGACGGCCGTCGGTCGCAGCGAGACGATTTCGCCGGCGATGGCTTCCGGCAACAGCTCGGCGGCCTCGTCACCGTCGGCCGCCTCCTCGCCCGGCGGGCTGGCGAAGAAACCCCGGCCCAAGACGGTCTCACCGACCCGGCACGGGCCGCAGCAGTGTCAGGTCTGCAGCAAAGTGTTCGGGAACGCGTCCGCCCTGGCCAAGCACAAGCTGACGCACAGCGACGAGCGGAAGTACGTGTGCGGCATGTGCTCGAAGGCGTTCAAGCGGCAGGATCACCTCAACGGCCACATGCTGACGCACCGCAACAAAAAGCCGTACGAGTGCAAGGCGGACGGATGCGGCAAGTCGTACTGCGATGCGCGATCCCTGCGGCGTCACACGGAAAATCATCACACGGCGCTCGGCCTGGCGGGTGGCGCTTCCGGCACGGCCAGCCCCGGCCCCGGCGGAGGCAGCAATGCCGGGCCACCCGGGGGGCTCAGTCTGTCCCCGGCGACGGCTAGTGGTGACGCTAGCTCTCCGCACGGCGCCACGCTCGTGCAGTTCAGTGCCAACGGAAGCAGCGGAACGACCGGTTCCGGTAGCTCCAGCAACAGCAATTGCAGCCTTTCAAGTAGTTCGAGCAGTAGCAGCTCAagcagtagtagcagcagcagtagtagcagcagcagcagcagcagcagtagtagtagtggcAACGTGAGCGACTCCAACTCCAGCTGCAAGTCACCATCGCCAAGCTCGCCGGCGCCCGGTTCCGGCAACGAGGGTCTCACCCGTCAGCAGCTCGATCTCATCTCGCAGATCATGCAGCAGACGAAGCAAGCGAacgcggccgccgccgccgccgctgccgccgctgcctcctcgtcctcctcctccagctCGAGCAACGCTTCCAACAACACCGCGTCATCCAACACCAACGCTTCGGGTACCGGAGTTGGTGGCCAGAAAGTTCCGCTTCGTCCGCGGACCTGGAACATGCAGCTGCAACTCAGCCAGAACAAGCTGTCCGCAACCGCAAcgtcgtcgacgacgacgacggcgacgctGGTGAGCGCCGTCCCGAGCGTGTCCTCGCTAGCAGCCGCATCGACGGTTGCGTCATCGTCCCTCACCAGCACCCTCgtgtccaccaccaccaccgccaacagcagcaccaacaccaaGGTGCCAAACGCTGGCAGCGCAAGTGCCGATCCTAATGGACCACTCACGGCGCCGTCGGGCTCGGTGTCGTCCACAACTGCGTCCGGTGCGGTCGGTGCGGTTTCGACGGCCAACTCTGCCACGGCAACCACCACActcaccaccgccaccaccactaccaccaccaccagccaaCCCCAGCAATCGGCAAccggcagcaacaacagcaacaacaacaagctcGAGCAGAAACCGGTCGAGTGCAATCTGTGTCACCGCAAGTTCAAAAATATTCCCGCCCTCAACGGGCACATGCGGCTGCACGGGGGCTACTTCAAGAAGGACTCGGAGGCGAAGAAATGTGATAAGAAGGAGAACACCGGGCCACCGCTGCAGACAGCCAGCGTTGGCGTGCGGGCGCTGATCGAGGAGAAGATCATCAACAAGCGAAGCAAGGACCTGAAGAATCTATTGTTGAAGGGTTCGTTCGTGGTGCCGGCGCCGCCCCTGACCGCCCGCCGGCTGATCGAGGCCAGCGAAGCATTCCTCTCGCCGAAGCCGGGCACGGTAGCGATCGTCTCGACGCAGAACGGCACCACGCAGATCATCAACACCGGGACGCTCCACTCGAAGGCAACCATCCTGACGGCGAGTAATGCGGCCAGCACCAGCGCACCACCCGCGATCACGATCAACGggctgacgacgacgacggccgcCGGTACGATCATGGCCACGGGCATCCCGCCCGGGACGGAGCTAAAGGATGCCACGTTGATCGAGCTGCTGAAGCGCGGCACGAAGGTGGCGGTGAAGCGAGCAGCAACGCCGATACtcaaccaacagcagcagtcgGTTGCGTCGTCCATTACGACCACGACCTCGAGCTCTTCGGGAGCCGGGAACCTTATCAGCACCGGTTCGCGATCGGTTGTGCTACCCGGGACGACGAAGCTAACGACGACATCCTCGAGTGGTCTGATGAGCTCGACAGCGGACAGTGGTCCACTTTCGCTGACGATCTCCCAGGCCACGGGAGGTAGTACAGCTGGGGACGTGTTCACACTGGCCTACTCCACCGACACCGGTGGAGGGACGACCTTCTTCAGCGATAACGACGTCTACAGCGTGAGTGAAACGGCAATGCTCCTGCAAGCCGTCGATTCCATCCAGCTATTGCAGGACTCCAACTCCGCCGAACCGCTGGACGAAATCGCCCTCTCGGACTACAGCTCCATCACCGACCAGGGTTTTACGCCGTCGCGCCAGATTCAGGCCGTGCTCGATTCTCCGCTACCCGAGAGTCTCGCCGAGTTCGGGGCTCTCAACTCCAAAGACTTCGTCCTGTACGGGAGCTCGCAGCCGTCGTCCGTTAGTAACGGACCGTCGGGCAACTCCACCGGCGCCGGCACTAACCTGCTCGAGTCACCGTCGGGTGCGCACCTATCTCCGCTTCCCTCACCATTGGCCTACCCAACGCCACCGGCTTCGCATGAGGCGGTGGCCCAGGCATCGCCTTTCCTAGACGACTCGCGCCACTTCACCGATGCGGGTTCGTTCTTCGACGACAAGCGTGGTCAGAACTTCCTCGACGATGGGTTCTTCAAGAGCGAGCCCAAGGGCGATGAACACGGTGCGGGACCGGGAGCGGGTAAGCTTACCGACAGCGAGAAGATACTGGCGCTGAAGAACGAGCTGCTTGACCATGAGCACCACGATCTGTTCCGGTCGAACAAGAACCTGTTGGACGAGCACTGCTCGGAGCTGTTCAAGTCGGAGGATAGCTTTTTCGCCGAATCGAAACCGTCGCCGGTCGACGGGACGTCCAAGATGAACCTGGACTTCCTCGACGACGCGCAGGTGTTCATCGAGGAGACACGGAACGCTGCCTCGCCGCTCTCGAATGCGTTCTTCTCCGCCACCATGCACGCCGCATCCGCCGAGGAGGTGAAGGAGGCGCTCGAGGTGGTACTACCGCACGACGATGACATCGGCGTGTCCGAGGGTGACATCGACCTCTACTACCTGAACGGCCTTTCCTCGCTGCAGTCGCAGATGATGCCCAACTCGGACGATCCGCTGCTGTCGTCCTCGCCGAAAGACTTCGCCCACCGTCAGCATCAGAAGTTCCTGTTCGAGCAGAGCCAGCAGCAAGCGCTGCAACACcatcagcaccagcagcaacaaatccagcagcaacaccttcgacagcagcaacagcagcagcagaatcaTTCATCCACGCACAATCATCCACTGCAGCAGCAAGTGGCCGCCGCCAACAACTGTATGCCACCTAGTGCCAAAAAGTCGAAACCTTGCGTCGGCGACTCCGGGACGATCCTCGCCGGTGACTCGAGCAAGGTCCCACTCACCGTACAAACCGAACCGATGTCCAAGGGCACGGACAGTGTGTTCCTCAGCCCGAGCAGCCTGTCGTCGCACAgctcttcgtcgtcgtcgtcgtcctcgatGGCGACTTCCGCCGCTTCGCCCAAGCTCCAGCACGCCCTCCTAGGAGGCGGTGGAGGAAGTATCATGTGGCCTCGCAAGCGATCCCAGACATCCACCGGAGGCAACGGGCTGAGCCACCCGATGGGGCAACGTAAGCCAACCGTCTACCTGTCCAAGCTGCGCCGTTCGACCACGACGTCCCTCCCGGCCGTTCACTACACGCCTTCGCCTATGCTGAACCCGGAACGAACCGGTTCCACCGGGCTGTACGCAAACGTGGTGCATAATCGCGCGTCCGGCCTGGACACCGATCTCGACAGTACGATGGACAGCACGAGCGACATCTTCTCCGAGCCGCCCCTGCCTATACGGCCCCGGATCAACCTCGGTCCGGACTATCAGGCAACGCTGCCCGACTGCACGCGTCCCAGTGTCTACAGTGCGCTGCAGGGGTACTCCGCAAACCCGACGCAACTGTGGGATCCTGCGGTCGCACACAACGAGCGCCAGGTACAGCGTTTCATCGAACTGGCGCGATCTTCGGCCGCCCCCCTCGGTTGCCACTCGGAGGAGAACGCCCTCCAGGCGCTGCTGGAAGCGAACGGCGAGATTCACGTCGCCATCCTGAGCATGCTGCAAGCGCCACCGGCAAGCATCCATCGCCGCTGGACCGCCGGTGAAATCGAGCAATTCATCCAGGGTCTCGAGAGCTACGGCAAGGACTTCCATCGGATCGCCCGCGAGCTCCTGCCCGCCAAGTCGACGGCCGACTGCGTCCAGATGTACTACTTCTGGAAGAAGCTCTGCATCGACTACAAACATTCGCACGGCGGCGCGCACCGGCTCGTGGACGGGCTGGTGGCGTCCAAGTTCGCCGGTTCATCATCGCCGTCCCCACCACCGACTGCCCCtgcaccacctccaccaccaccaccggtggaAGACCTGTTGATGGACCATCTGGACTATACAAGTACCACGATCGGCTCGGCGAAGGGTCACCACTCGACTCAGTCGACGGCTTCGACGCACGGAAGTGCTCATCAGCCTTCCGGTAACGCACACAATGCGCCCAGCGATGTCCGACCGCACGTATGCGAGGTTCCTGACTGTTCAGCGAGCTTCTCGTCGAAAGCGGCCCTTCACGGTCACATCCGCATTCACTGTATCGGACGTAGCCACAGCGCAATTCAAAATGGTAATTTCTTGAGTGCCGCCGGTAACCCCATTAACCCTAACCTCATACCGACAAAGGATGACTATCCCTGCAAGGTGTGCGGCAAGGTTTTCAATAAGGTAAAAAGCCGAAGCGCCCACATGAAGTCACACCGGCCCCAGGATGCAAGCGATCAACTGCAACACCAGCTGCAactgcaccagcagcagctgcagcaacgCCAGCAAGATAGCGAAAAACAAGGCACCACCGGCGACCAGCAGCCATCCAAATAA
Protein Sequence
MVRPESNYFSKWPGQKRAGFEKRRRQHLQAQVASAWRRVQNSIRLPLAGLAPPRVLMCSASMGAEGSVTLQLREAVPAPDATGSLDGALTIGYPDSEMLADMLGTFQGASTGGADSDGGSFDLLQDTGRTAAEQIEHILTKSTASSSSSLGTKAATEKANAITNRLSSSSSTSSSPSSSSSSLSGVLHHGTTMVTVKSAASGSSPSASIAAASPTASTTSLVLTAVGRSETISPAMASGNSSAASSPSAASSPGGLAKKPRPKTVSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHTALGLAGGASGTASPGPGGGSNAGPPGGLSLSPATASGDASSPHGATLVQFSANGSSGTTGSGSSSNSNCSLSSSSSSSSSSSSSSSSSSSSSSSSSSSSGNVSDSNSSCKSPSPSSPAPGSGNEGLTRQQLDLISQIMQQTKQANAAAAAAAAAAASSSSSSSSSNASNNTASSNTNASGTGVGGQKVPLRPRTWNMQLQLSQNKLSATATSSTTTTATLVSAVPSVSSLAAASTVASSSLTSTLVSTTTTANSSTNTKVPNAGSASADPNGPLTAPSGSVSSTTASGAVGAVSTANSATATTTLTTATTTTTTTSQPQQSATGSNNSNNNKLEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSEAKKCDKKENTGPPLQTASVGVRALIEEKIINKRSKDLKNLLLKGSFVVPAPPLTARRLIEASEAFLSPKPGTVAIVSTQNGTTQIINTGTLHSKATILTASNAASTSAPPAITINGLTTTTAAGTIMATGIPPGTELKDATLIELLKRGTKVAVKRAATPILNQQQQSVASSITTTTSSSSGAGNLISTGSRSVVLPGTTKLTTTSSSGLMSSTADSGPLSLTISQATGGSTAGDVFTLAYSTDTGGGTTFFSDNDVYSVSETAMLLQAVDSIQLLQDSNSAEPLDEIALSDYSSITDQGFTPSRQIQAVLDSPLPESLAEFGALNSKDFVLYGSSQPSSVSNGPSGNSTGAGTNLLESPSGAHLSPLPSPLAYPTPPASHEAVAQASPFLDDSRHFTDAGSFFDDKRGQNFLDDGFFKSEPKGDEHGAGPGAGKLTDSEKILALKNELLDHEHHDLFRSNKNLLDEHCSELFKSEDSFFAESKPSPVDGTSKMNLDFLDDAQVFIEETRNAASPLSNAFFSATMHAASAEEVKEALEVVLPHDDDIGVSEGDIDLYYLNGLSSLQSQMMPNSDDPLLSSSPKDFAHRQHQKFLFEQSQQQALQHHQHQQQQIQQQHLRQQQQQQQNHSSTHNHPLQQQVAAANNCMPPSAKKSKPCVGDSGTILAGDSSKVPLTVQTEPMSKGTDSVFLSPSSLSSHSSSSSSSSSMATSAASPKLQHALLGGGGGSIMWPRKRSQTSTGGNGLSHPMGQRKPTVYLSKLRRSTTTSLPAVHYTPSPMLNPERTGSTGLYANVVHNRASGLDTDLDSTMDSTSDIFSEPPLPIRPRINLGPDYQATLPDCTRPSVYSALQGYSANPTQLWDPAVAHNERQVQRFIELARSSAAPLGCHSEENALQALLEANGEIHVAILSMLQAPPASIHRRWTAGEIEQFIQGLESYGKDFHRIARELLPAKSTADCVQMYYFWKKLCIDYKHSHGGAHRLVDGLVASKFAGSSSPSPPPTAPAPPPPPPPVEDLLMDHLDYTSTTIGSAKGHHSTQSTASTHGSAHQPSGNAHNAPSDVRPHVCEVPDCSASFSSKAALHGHIRIHCIGRSHSAIQNGNFLSAAGNPINPNLIPTKDDYPCKVCGKVFNKVKSRSAHMKSHRPQDASDQLQHQLQLHQQQLQQRQQDSEKQGTTGDQQPSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00109072;
80% Identity
iTF_00096608;