Aque010376.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000038.1:13389877-13424037[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00043 0.13 14.9 0.7 2 23 429 451 428 451 0.96 2 28 0.0002 0.061 16.0 0.8 1 21 471 491 471 492 0.95 3 28 0.0097 2.9 10.7 0.5 3 23 592 612 590 612 0.95 4 28 0.00045 0.14 14.9 0.5 1 23 618 641 618 641 0.96 5 28 0.00018 0.054 16.1 0.1 1 23 714 737 714 737 0.96 6 28 0.012 3.6 10.4 0.4 1 23 743 766 743 766 0.96 7 28 0.18 55 6.7 1.5 1 23 779 801 779 801 0.97 8 28 5.3e-05 0.016 17.8 0.9 3 23 846 867 845 867 0.96 9 28 0.37 1.1e+02 5.7 0.8 2 23 930 953 929 953 0.94 10 28 4.6 1.4e+03 2.2 0.0 2 23 962 984 962 984 0.83 11 28 0.15 47 6.9 0.0 2 23 991 1013 990 1013 0.94 12 28 1.9e-05 0.0059 19.2 1.2 1 23 1021 1043 1021 1043 0.98 13 28 0.91 2.8e+02 4.5 1.5 1 23 1075 1099 1075 1099 0.93 14 28 0.00031 0.095 15.4 3.3 1 23 1102 1125 1102 1125 0.97 15 28 0.21 64 6.5 0.6 2 23 1132 1154 1131 1154 0.95 16 28 0.0045 1.4 11.7 4.7 1 21 1181 1201 1181 1202 0.95 17 28 0.004 1.2 11.9 1.8 2 23 1216 1237 1215 1238 0.93 18 28 0.53 1.6e+02 5.2 1.1 1 23 1241 1264 1241 1264 0.94 19 28 0.096 29 7.5 2.4 2 23 1271 1294 1270 1294 0.91 20 28 4.5 1.4e+03 2.3 0.2 2 23 1302 1324 1302 1324 0.94 21 28 5.5 1.7e+03 2.0 0.0 2 23 1331 1353 1330 1353 0.87 22 28 0.34 1e+02 5.8 2.7 2 23 1362 1384 1362 1384 0.96 23 28 0.55 1.7e+02 5.2 1.1 2 23 1390 1412 1389 1412 0.93 24 28 0.015 4.5 10.1 0.2 1 21 1512 1532 1512 1533 0.95 25 28 0.48 1.5e+02 5.3 1.9 2 23 1617 1639 1616 1639 0.94 26 28 0.48 1.5e+02 5.3 0.2 2 23 1646 1668 1645 1668 0.94 27 28 0.45 1.4e+02 5.4 1.8 1 23 1679 1701 1679 1701 0.97 28 28 0.0036 1.1 12.0 0.3 3 20 1710 1727 1709 1729 0.95
Sequence Information
- Coding Sequence
- ATGAGCTCTGCAGGCTCTGTGCCTCCTACGACGCAGTCAAGATGGACCTTTTCGGCCAGGAAGGCAAGAATCGTCAACTCATTGACAAAATACAGGCCTGTCTCCCCTTCAAGTATTGAATTCCTGAAACGGACAAGCCTTCTGGGTAGTAGCATCACATCATCATATCCAAGCAGTAGTGCGGATCGAATTCGAACACCGAGTCTTTTCCAGCAGGGACACCCGTTAGGTGGAATTGAAGACCTCGGAGGAGAAGCGAGTGGTGGCCTTTATGCTTTATCTCCGCAGTTCTGGGGCCGTTGGGGGCCGTGGCCAGGGCTTTCGGCTCGCCGGGTGCGGTTGATCGCCTGCTACGTGGAGACTGTCCATGTCCGGCCCGGCCGTCTTGTCACTCTTGTCTCGTGTCCTTTCCCCAGTTCCCCTCCTGTCTATCTTTCCTCTCCGTTCCTCGCTCGGAGAATCGCCCCCTGGTCCCGAACGAACAGCTACGAACAACTCCAGGCCACTGGTGGAGTGTTGGCTCCCGGCTTCCTGCATGGCGATGGCAAGGCGCATCCTCGTCGCGTTCAACTGAGTCGACACTGTCGACACTCGACTGTCGAAGCACCAATACTACCGTCGGCTCTGTTTCTCTGTTCCCGTCTATACGTTCACTGTTCAGATACTTTGCTCCATACTACTAGCTCTTTTCATCCAGTAACCACTTCCATCTCGCCTTCTGAGCCTTCAGAAATGCTTCAGAATTCAGCTCAGACTCAGATTCACCAATGGACAATGGCAACGTCGCCGGTTGCCTTGAGCCTCGACTACCTGACGCTCTGCTGCCCGATTACCTGCATGGCTCTACAAgcAAATGATCATGACAGAAGGAATTCTTCAGAGCATTATTCGGAATTACGTTCGGAACTCCTCAAGGAAAAAGAGCATATGCCAATACTCATTCCTGAAGCCCCCGTAGTCAATCCAAATGCAGCTTTGGGTACACCACCAAGACTTAATTCTGATGGCGAAGCAGATAATGACATCGAGGAAGTTCTTGAGCAAAGTGGCACTGATGAAGCTGCGGACGATGCCGAAGACAGAAAGTCGGAGGAATACGAGATGGATATGGAAACGAATCCCAGTGACTTTTTGGAAATGCCACCGATGGTCACTGATGATGCGGAAGAAAATGAGACAGCGAACAGCGTTTCCGCTCGAGGGCGTGCACGAGATTCCAGGGGATTTCAGCACAAATCTGAGCAACACGAAGTTTATGTCTGCTCACTTTGTCATCCAGCTGTGACGTGTAGATATTGTTCGCGCATTTATTCCACACGAGTAAACCTAGAAGAACACATCAAATCCAAGCATACGGGTCTACCACTTCCGATGGAAGTGCCAGTTTCCtatgttcaaccagaaaacaaaTACCAGTGTAAGACTTGTCCCAAGATGTATACGAACACAACAGACTTGAACAAACACAGTCGAATCTGCACAGGAAGTCAGCAAAAAGAACTGCCAAATCATGATACAGCCACGGAGAAAATCAAGAAAACTCAACTCGACACTTCAGACATGTCTAGTAACGACTCGAACAACGAGACTAAAGATTACAAGAACGCCGAAGCTAAACTTGCAAAAAATCCTCAGCTCACAATCCTCAAACAGGCGCTCACCAAAGGCGACATATTGAAGAGAAGCTACgatgaaaaatacaaaactaGTTCCAAAACCAAAAAGCAAGCCAGAACCGATACTAGTGAGACTGATGTACAGAAGCGATGGTTCTGCGAATCCTGCCCTAAAAACTTCACCTCGCTCGAGAGCTTTAAAGAACACGAACTTTCACATGAAGCTGAAAAACCCTACTTTTGTTTATTATGCGAGAAAGATTTCGCCCAGAAATCTTCCTTAAGTAATCACATTGTCACTATGCATGGTGTTGATCCTAATCCCATTGTCGAGAGCGATAGGTGTTTGAAAAAATCGCTTCTTGCTCATCAATggaataaaaatcccgaatctgCGAACGGGGAACCGAATCAGGTCATCAAAAAAGAGGAAGCTTCGTCGCCTTATCCCGAAAAAGCTTTGGAAAACGAGGAAGAAGATCACGAAAGCAACCAGGACAAGATGATCGAAATTGAAACAGTCTTCGTTTGCGAAATCTGTACTCGAGATTTTAACGACAGAGCATCATTGTGGCTTCATATCAGAGCCACGCACAAAGAATGCGCCGCCTTTGCTTGCGGAGTCTGTTTGAAAATCTGTTCTGACAACGCCCAGTTGCTCAATCATGTAAATATGTATCACGGAGGTTCCAAACTTCTCATGTCTGAACAGAGGCGCTATAGCTGTACAATTTGCGGCAGACAGCACGATTCTCGAAAGAAGTTAATCACCCACGTTTCGATTCACAACGTGGATCCCAGTTACGACCCTTCGAGTTTCGTTCAACTCAACAGCAACTATTACAACGAGAATCTAAACAGCAACGAAGCTAACGAGCAAGTTATGGATGGCAATGTCGAGGATGGAGAAAAAGTCGACTGCTATATTTGCTACAAATCATTCCCCAACGAAGACCATCTTATCAGGCATCAACGAAACGCTCACAAGTCCGATCCAGCGGTAGCGATCGGAGAATCCACAGCGAATGGTAGTGGAACCGGGCCTAACGGGAATGGAAATAGAGCGCAATATCATTTATTCTTCGTCTGCGAACTTTGCGGCAGTTCTCATCCCAGTAAATGGGAGCGCTGGCTTCATGTGTCCAGTGTTCACGGAAACGAACCTGCGATCAAGTGTGAGAGGGAAGATTGTGCGAAGATATTCGCGACAAAGTCTCTTCGAAATGAACATGCCCAGCATCATTTGATCCAAGGTAGTTCGCCGAACACCTGCGAGATCTGTGGGAAATTATGGGGAAGTCGAGTAGATTATTGGAAGCACGTGATGGGAGTCCACTCAGACACTGTTCCTCTAATCTGTGGAGTGTGTCTCAAAGTATTCCCTAATGTTCTTCAGTTAAGTTCTCACGTGAAGGTGAATCACTGGCCTTTGACGAACGGTGATTTCAGTTGTGATATTTGCGGCAGGCCTTATTCCAATAAGTCTAAAATGTCCAGGCACAGAAAGATTCATGGTCTTGATGGCGAGGGTCACGCGCATCCGGATCCTAGTGAATACATTAACGATTCGGTGAGACTGGATAACGAAGGAGCCGTGGAGGTTGATTACAGTTGTGAAATGTGTGGGGATTTGAAGTTCTTGAACCTGGAAGACCTCTGCAATCATCGAAGAATGACGCACAGCCTCTTCCCCTGCGATTTATGCAACAAGTGTTACGGAAGAACTTCGCACTTGTGGAAACATGTTAATCGGGTTCATAAGGGTCATGAGGACGTCACCTGTCGGTTTTGCATGAAGACGAGCGCCTCGAGAGATCATTTGGCAGCTCACATTGCTAAGATTCACAGGTACGAGCCTGAGGTTAAAAACGATACAAGAGAGTCAACGAATTTCAAGGTCGCAGTTCCTGAGGACGAGATTCTCCATCATTGTGAGAAATGCAACAAGGGCTTTCATAAACGGTACTTGCTCCGGCGTCACATGCAAGGGTGTCAGAACTCTCGACAGGATCCTGGCGCGCTTTTGACCAGGTGTCGAGCCTGCGAAAGGATATTCAAGGATCGAGCGAGTCTTCAAAAACACATCGAGAATCATCACAGCAGTTACACTTGTCATTTGTGTAACGAAACGATAACTTCGAAGCTTGGGATCATGACACATAATCGGGTTAACCATATGGACCATCCGGATCTCACATGTGAGCACATCAGTTGCAAGAAGCTTTTCCGCACGAAGGAGGATCTTGAGTCTCATAAAAAAGATCACAAGTATCACACAAGTCCGAATGTTTGTGATTTCTGCGGGGACACTGTTGAAAATAAACTCAAGTTGAAGATGCATGTCTTGTCGCTGCATCGAAACGAAATCGGAGTTTCTTGTGGCGTCTGTCTGATTCCGATGAAAGACCCGAAGGATTTGAAGAAACACGTGGAGGACACTCATGAAAGTATTCTTTCGAAACCAAATACTTGTCAGGTTTGTGGAAAGCAGTACGCGTCAAAGTGGAAAGCCTTTGATCATACGAAAAAGTGCCATGGGAAGGTTTTCAAAACCTGCAAACAATGCTTGGCTGTGTTTATTACCGAAGAAAGTATGAAGAACCATTATGAACACGTCCATAACGTTCCAAAAGACCAACTGGCAACTTTCGAATACCGACTGGAAATCGGACGCAAACGCCACTACGATTCCTTGGAAATCGTGATGAAGGAAGAGCCAGAGGAATTGGAATTCGATGAGGAACCCATCGAGGATTATTCGAATGATTATAAGAGAAGGATATCTGACTCTGATGATTACGATGTTCGACCTGATTTCTATATAAGAGAGAACAACGAGCAAGAGGAATCGATGCGACCTTTGAAGAAGATGAAGCTAGACGCAAAGACTAAAAAGAAGATAAAGCAACGAGAAACCTTCGAGTGCGAGAACTGCAAGATACAGTTTAACACCAAGATTATGTTTTGGAATCATATCAACGTTTGCCCGAAGCGGAATATGCTTACTAAGGAGGATGATACAAGTTTCCCAACGTCGATTCTCGAGGCgcatttaaagaataataatctGATTAAGAGGGAAGAACCTGAGCAGGAACTTGACGAGAATAACCTAAACATTCCANNNNNNNNNNTTCAATCTCTTCGAAGATATCAACATGCAGTTGTCGGCAATAAATGTTCGAGGAAGGATTCAAGGAAGGTTTACGATGAATCTACAAATACTGAGTGTACTTGCGAAGTTTGCGGGAAGCAGTGGCCTGCGAAGAAACACCTATGGCAGCATTTGATTCGATTTCATCGAGCAGAGGCTGCTGTCACTTGCGGGGTTTGTCTGAAACTCTGTACAACTTATGAAGACTTGGCCGATCATCTGAAAGCTGCTCACGAAGCTTTGTTGTCCTGCGAGGGAAATAACTTCACCTGCAAGGTTTGCGGAAGGTACCACAATGCCAGAAGCAAATTGTTGCTGCATATGAGCATCCACATAAACTGCAAGAATAATCCGATGTGCAAGAAGTGCAATCGCAGTTTCGAGACGGAAGCAAAATTGAAGGAGCATATTGGGAATTGCGAGGGAAGACAGTCGGGATTGGGAATCAGACATGATGCAGAGGAAGATGGAAGTTTTATTGGAGATGAGGGCGATGATGGAGACGAGAAAGAAGAAGATTATGAATCGGAGGGAGAAAAGGGTTCTGATAATGAAGATAGCAGTTCGGATGACTCTGAAGATTCAGATACGGATAGTTCCTCTAGCTCGAGTGATGATGAAGGTGATGAGAATGCAGAAGAAAATGAAGTAGCGGCTGAATCGAGAACTACAAGTAGACTCGGGGAATTGAGTTGCACGAGTGATAGTGAGGAAGAAGGCTCGGATAATTCGGAGGACCTTGAGGATGCTGATGAGATTAAGACTCATGTTGGGGTTGAAGATGGGAAAGAAGACTTAAggagtaaagaaattaaaatggaaaatatgagAATTGAGTCGAATCCAGTGTTGACAGAATCTGATACAAAAGATTCTGCAGCTTTCAGAGGGTTGAAGAAGAAACCGGTGAAGATAGAAATAGAGAATATGGATTACTCGGATGATGAAGGTCCTCCGGTTTTAAGTCCAATGATGCCGTTGTTGCCACAACAAGAGGGGGAGATGAATAGTCAGATGGATGAGATGAGTCATAAATTGAGTCCTATGGTGACTTTGGAAACTAAACTGGACAAAGAAATGGAAGATTGTGAGTTTGAAGATGTAAAGATCAAGTTTCAGGATCTTCAGAATAAGAATAAAATGAAGAGGGAAAACTTGGAGGGATCGGAAGAATCAGAGTCAGAGAGCGAAGATGAGAATAAAATGTGTATTTACGAGGAAGCTGTGAATCGAGAGGCTAAACAAGAAGGTCTCAGTACGATCAGTGATGAGGAAGAAGATGCAGAAATGCAGGAAGAAGCGAAGGAAGGAGAAACTGTAGAAGACAAAAGAACAGAAGTAATCTCCGTAGAATCTGAAGATGAAAGTGAAaacgaagaagaagaagaagaagaagaagaagaagaggatgAAGAATCCGAAGATGAAAGCGAGCAGCAGGTCCAAATTGCAAACCACAGCAATCCCGCAACAATCGATCATTCAGAAACTCTTTCACAAGACTTTGATGGGGAAAATTCAGATCAGGAAGAAGATGAAGAAGAGGAGGAGGAAGTTGAGGAAGAAGAAGATGAAGATGCAGAAGAAGCAGAAGAGGACCTCACAATCGAAAACGCTGAAGTTGAAGAGGAACTAGCCGAGAATCATTCCATCGTGGAGGAAGAAGTCGCAGTAGAAGAAAGCTACGAAGACGAACCCGTGGTGGATGACGAAATGAACAACGAAGATCATTCcattcaaaacttaaataaaacCATCCTCACCGTGGGCAAGGATTCTGAAGGTAATCCCATATTGATCCGCGAAGTGGTAACTCAATATGCCTACCCGGATGAATTCGATTGTGAATCCGACTATGCACACCTTCCGCAGgagcaaaattctttttttaatgccCACGAAGATCAGAGAATATCGGAAGAAAACTTTGCTTTAAATAGTGATAGTCTCGATCAAACCACGACTGAACCGGAAGTCCAGACGGTAGACGAATTAGGTCATCACGAGGAGCGTTAA
- Protein Sequence
- MSSAGSVPPTTQSRWTFSARKARIVNSLTKYRPVSPSSIEFLKRTSLLGSSITSSYPSSSADRIRTPSLFQQGHPLGGIEDLGGEASGGLYALSPQFWGRWGPWPGLSARRVRLIACYVETVHVRPGRLVTLVSCPFPSSPPVYLSSPFLARRIAPWSRTNSYEQLQATGGVLAPGFLHGDGKAHPRRVQLSRHCRHSTVEAPILPSALFLCSRLYVHCSDTLLHTTSSFHPVTTSISPSEPSEMLQNSAQTQIHQWTMATSPVALSLDYLTLCCPITCMALQANDHDRRNSSEHYSELRSELLKEKEHMPILIPEAPVVNPNAALGTPPRLNSDGEADNDIEEVLEQSGTDEAADDAEDRKSEEYEMDMETNPSDFLEMPPMVTDDAEENETANSVSARGRARDSRGFQHKSEQHEVYVCSLCHPAVTCRYCSRIYSTRVNLEEHIKSKHTGLPLPMEVPVSYVQPENKYQCKTCPKMYTNTTDLNKHSRICTGSQQKELPNHDTATEKIKKTQLDTSDMSSNDSNNETKDYKNAEAKLAKNPQLTILKQALTKGDILKRSYDEKYKTSSKTKKQARTDTSETDVQKRWFCESCPKNFTSLESFKEHELSHEAEKPYFCLLCEKDFAQKSSLSNHIVTMHGVDPNPIVESDRCLKKSLLAHQWNKNPESANGEPNQVIKKEEASSPYPEKALENEEEDHESNQDKMIEIETVFVCEICTRDFNDRASLWLHIRATHKECAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPSYDPSSFVQLNSNYYNENLNSNEANEQVMDGNVEDGEKVDCYICYKSFPNEDHLIRHQRNAHKSDPAVAIGESTANGSGTGPNGNGNRAQYHLFFVCELCGSSHPSKWERWLHVSSVHGNEPAIKCEREDCAKIFATKSLRNEHAQHHLIQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSSHVKVNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEGHAHPDPSEYINDSVRLDNEGAVEVDYSCEMCGDLKFLNLEDLCNHRRMTHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRFCMKTSASRDHLAAHIAKIHRYEPEVKNDTRESTNFKVAVPEDEILHHCEKCNKGFHKRYLLRRHMQGCQNSRQDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCEHISCKKLFRTKEDLESHKKDHKYHTSPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDTHESILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFITEESMKNHYEHVHNVPKDQLATFEYRLEIGRKRHYDSLEIVMKEEPEELEFDEEPIEDYSNDYKRRISDSDDYDVRPDFYIRENNEQEESMRPLKKMKLDAKTKKKIKQRETFECENCKIQFNTKIMFWNHINVCPKRNMLTKEDDTSFPTSILEAHLKNNNLIKREEPEQELDENNLNIPXXXXQSLRRYQHAVVGNKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYEDLADHLKAAHEALLSCEGNNFTCKVCGRYHNARSKLLLHMSIHINCKNNPMCKKCNRSFETEAKLKEHIGNCEGRQSGLGIRHDAEEDGSFIGDEGDDGDEKEEDYESEGEKGSDNEDSSSDDSEDSDTDSSSSSSDDEGDENAEENEVAAESRTTSRLGELSCTSDSEEEGSDNSEDLEDADEIKTHVGVEDGKEDLRSKEIKMENMRIESNPVLTESDTKDSAAFRGLKKKPVKIEIENMDYSDDEGPPVLSPMMPLLPQQEGEMNSQMDEMSHKLSPMVTLETKLDKEMEDCEFEDVKIKFQDLQNKNKMKRENLEGSEESESESEDENKMCIYEEAVNREAKQEGLSTISDEEEDAEMQEEAKEGETVEDKRTEVISVESEDESENEEEEEEEEEEEDEESEDESEQQVQIANHSNPATIDHSETLSQDFDGENSDQEEDEEEEEEVEEEEDEDAEEAEEDLTIENAEVEEELAENHSIVEEEVAVEESYEDEPVVDDEMNNEDHSIQNLNKTILTVGKDSEGNPILIREVVTQYAYPDEFDCESDYAHLPQEQNSFFNAHEDQRISEENFALNSDSLDQTTTEPEVQTVDELGHHEER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00064677; iTF_00980366; iTF_00011384;
- 90% Identity
- -
- 80% Identity
- -