Most012088.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melikaiella ostensackeni
Gene Symbol
-
Assembly
GCA_032362435.1
Location
JAUMHM010000031.1:15465629-15492727[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 8.2e-06 0.0027 20.3 1.0 1 23 165 187 165 187 0.98
2 30 0.036 12 8.8 1.5 1 23 210 233 210 233 0.96
3 30 0.00038 0.12 15.0 0.7 2 23 240 262 239 262 0.96
4 30 0.00018 0.057 16.1 0.8 1 21 282 302 282 303 0.95
5 30 0.82 2.7e+02 4.6 0.3 3 23 403 423 401 423 0.93
6 30 0.0011 0.35 13.6 0.6 1 23 429 452 429 452 0.96
7 30 0.00016 0.051 16.3 0.1 1 23 525 548 525 548 0.96
8 30 0.011 3.4 10.5 0.4 1 23 554 577 554 577 0.96
9 30 0.16 52 6.8 1.5 1 23 590 612 590 612 0.97
10 30 4.7e-05 0.015 17.9 0.9 3 23 657 678 656 678 0.96
11 30 0.33 1.1e+02 5.8 0.8 2 23 741 764 740 764 0.94
12 30 4.1 1.3e+03 2.3 0.0 2 23 773 795 773 795 0.84
13 30 0.015 5 10.0 0.2 2 23 802 824 801 824 0.95
14 30 1.7e-05 0.0056 19.3 1.2 1 23 832 854 832 854 0.98
15 30 0.072 23 7.9 1.1 1 23 886 910 886 910 0.97
16 30 0.00028 0.09 15.5 3.3 1 23 913 936 913 936 0.97
17 30 0.19 60 6.6 0.6 2 23 943 965 942 965 0.95
18 30 0.0043 1.4 11.7 5.1 1 21 992 1012 992 1013 0.95
19 30 0.0036 1.2 12.0 1.8 2 23 1027 1048 1026 1049 0.93
20 30 0.47 1.5e+02 5.3 1.1 1 23 1052 1075 1052 1075 0.94
21 30 0.22 71 6.4 2.6 5 23 1087 1105 1081 1105 0.87
22 30 4 1.3e+03 2.4 0.2 2 23 1113 1135 1113 1135 0.94
23 30 4.8 1.6e+03 2.1 0.0 2 23 1142 1164 1141 1164 0.87
24 30 0.3 97 5.9 2.7 2 23 1173 1195 1173 1195 0.96
25 30 0.49 1.6e+02 5.3 1.1 2 23 1201 1223 1200 1223 0.93
26 30 0.012 3.8 10.4 0.2 1 21 1323 1343 1323 1344 0.95
27 30 0.42 1.4e+02 5.5 1.9 2 23 1423 1445 1422 1445 0.94
28 30 0.42 1.4e+02 5.5 0.2 2 23 1452 1474 1451 1474 0.94
29 30 0.4 1.3e+02 5.5 1.8 1 23 1485 1507 1485 1507 0.97
30 30 0.0032 1 12.1 0.3 3 20 1516 1533 1515 1535 0.95

Sequence Information

Coding Sequence
ATGTACAATTTGGAAAACTTTTACGACTTCAGGACAGCATGTGTTAATGCAGTCGCTCTTTTGGAAAGCTTTCTGTCTTCAGATAACGATgAAAATGATTGCGAGAGAAGGAATCCTTCGGAACATTATTCGGAATTACGTTCGGAACTCCtcaaggaaaaagaaaatatgccAATACTCATTCCCGAAGCCCCCGTAGTTAATCCAAATGCAGCGTTGGGTACACCACCAAGACTTAATTCTGATGGCGAAGCAGATAATGACATCGAGGAAGTTCTTGAGCAAAGTGGCACGGATGAAACTGCGGACGATGCCGAAGACAGAAAGTCGGAGGAGTACGAGATGGATATGGAAACGAATCCCAGTGACTTTTTGGAAATGCCACCAATGGTCACAGATGATGCGGAAGAAAATGAGACTGTGAACGTCCCCGCACGAGGACGTGCACGAGATTCTAGGGGATTTCAGCACAAATCTGAACAACACGAAGTATACGTCTGCTCACTTTGTAACAAGGCCTTTAGTTCAAAAGGCCATTTGTCCCTTCACGCGAGAATACACGTCGGTGCAGGTGATGTCATCGGCGAAAAGGTTATCACTGACGATCACACTTCTTACAAAAGGCCCTATCAATGCGACCTCTGCTACAAAGCTTATTCAACAGCTAAACATCGATGGGGTCACGTCTCAACTACTCATCGagGTCATCCTGCTGTGACGTGTAGATATTGTTCACGCATTTACTCTACACGAGTAAACCTAGAAGAACACATCAAATCCAAGCACACCGGTCTACCACTTCCGATAGAAGTGCCCGTTTCTTACGTTCAACCAGAAAACAAATACCAGTGCAAGACTTGCCCCAAGATGTATACGAACACAACAGATCTTAACAAACACAGTCGTGTCTGCACAGCAAGCCAGCAAAAAGAATTGCCAAATCATGATACAGCCGCAgagaagataaagaaaattcaagtcgACACTTCGGATATGTCTAGTAACGACTCGGCCAATGAGACTAAAGATTACAAGAACGCCGAAGCTAAACTTGCGAAGAATCCTCAGCTCACAATCCTCAAACAGGCGCTCACCAAAGGTGACGTCTTAAAGAGAAGCTACGacgaaaaatacaaaactagTTCCAAAACCAAAAAGCATGCCAGAACCAATAATAGTGAGACTGATGTACAGAAGCGATGGTTCTGCGAATCTTGCCCTCAAAACTTCACCTTGCTCGAGAGCTTCAAAGAACACGAACTTTTACACGAAGCTGAAAGACCCTACTTTTGTTTACTATGCGAGAAAGATTTCGCCAAGAAATCTTCCTTAAGTAATCACATCGTGACTATGCATGGTGTTGATCCTAATCCCATCGTCGACAGCGATAGGTGTTTGAAAAAGTCGCTTCTCGCTCAACAATGGAATAAAAATCCCGAGCTTGCGAACGGGGAAACGAATCTGGTCATCAGAAAAGAGGAAGCTTCGTCGCCGTATCCCGCAATAGCTTCGGAAAACGAGGGAGAAGATCACGAAAGCAACCAGGACAAGATGATCGAAATCGAAACAGTCTTCGTTTGCGAAATTTGTACTCGTGATTTTAACGACAGAGCATCTTTGTGGCTTCATATCCGAGCCACGCACAAGGAATGCGCTGCCTTTGCTTGCGGAGTCTGTTTGAAAATCTGTTCGGATAACGCCCAGTTGCTCAATCATGTAAATATGTACCACGGAGGTTCCAAACTTCTCATGTCTGAACAGAGGCGCTACAGCTGCACAATTTGCGGCAGACAGCACGATTCTCGAAAGAAGTTAATCACCCACGTTTCGATTCACAACGTGGATCCCAGTTACGACCCTGCGAGTTTTGTTCAACTCAACAGCAACTATTACAACGAGAATCTAAACAGCAACGAAGGTAACGAGCAATTGATAGATGGCGATGTCGAGGATGGAGAAAAAGTCGACTGCTATATTTGCTACAAATCATTCCCCAACGAAGATCATCTTATCAGGCATCAACGAAACGCTCACAAATCCGATCCAGCGGTAGCGATTGGAGAATCCACAGCGAATGGCAGCGGATCCGGGCCTAACGGGAATGGAAACAGAGCACAGTATCATTTATTCTTCGTCTGCGAACTTTGCGGCAGTTCTCATCCTAGTAAATGGGAACGCTGGCTTCATGTTTCCAGCGTTCACGGAAACGAACCTGCGATCAAGTGTGAAAGGGAAGATTGTGCAAAGATATTTGCGACAAAGTCTCTTCGAAACGAACACGCCCAGCATCATTTGATCCAAGGTAGTTCGCCGAATACTTGCGAGATCTGTGGCAAATTGTGGGGAAGTCGAGTGGATTATTGGAAGCACGTGATGGGTGTCCACTCAAACACTGTTCCTCTAATCTGTGGAGTGTGCCTCAAAGTATTCCCTAATGTTCATCAGTTGAGTTCTCACGTGAAGGTGAACCACTGGCCTTTGACAAACGGTGATTTTAGTTGTGATATTTGCGGCAGGCCGTATTCCAATAAATCTAAAATGTCCAGGCACAGAAAGATTCATGGCCTTGATGGCGAGAGTCACGCTCATCCGGATCCTAGTGAATACATCAACGATTCGGTGAGACTCGACAACGGAGGAGTCGTGGAGGTTAATTACAGTTGTGAAATGTGTGGGGATTTGAAGTTCATGAACCTGGAAGACCTCTGCATTCATCGAAGAATGACGCACAGCCTCTTCCCCTGCGATTTGTGCAACAAGTGTTATGGAAGAACTTCGCACTTATGGAAACATGTTAATCGGGTTCACAAGGGTCATGAGGATGTCACCTGTCGGTTTTGCATGAAGACGAGCGCCTCGAGAGATCACTTAGCAGCTCATATTGCTAAGATTCACAGGTACGAACCTGAGGTGAAAAATGACACAAAAGagtcaacgaatttcaaggtcGCAGTTCCTGAAGACAAGATTCTCCACCATTGTGAGAAATGCAACAAGGGCTTTCATAAGCGGTACTTGCTCCGGCGTCACATGAAAGGGTGTCAGAACTATCGAAAGGATCCTGGCGCACTTTTGACCAGGTGTCGAGCCTGCGAAAGAATATTCAAGGATCGAGCGAGTCTTCAAAAACACATCGAGAATCATCATAGTAGTTACACTTGTCATTTGTGTAACGAAACGATAACTTCGAAGCTTGGGATCATGACACATAATCGGGTTAACCATATGGACCATCCGGATCTCACATGTGTGCACAGCAGTTGCAAGAAGCTTTTCCGCACGAAAGAGGATCTAGAGTCTCATAAAAAAGATCACAAGTATCACACAAGTCCGAATGTTTGTGATTTCTGCGGGGATACTGTCGAGAATAAACTCAAGTTGAAGATGCATGTTTTGTCTTTGCATCGAAACGAAATCGGAGTTTCTTGCGGGGTCTGTCTTATTCCGATGAAAGACCCGAAGGATTTGAAGAAACATGTGGAGGACACTCATGAAAGTATTCTTTCGAAACCAAATACTTGTCAGGTTTGTGGAAAGCAGTATGCGTCAAAGTGGAAAGCTTTTGATCATACGAAGAAGTGCCATGGGAAGGTTTTTAAAACCTGCAAACAATGCCTGGCTGTGTTTATTACCGAAGAGAGTATGAAGAACCATTATGAACACGTCCATAACGTTCCAAAAGACCAATTAGCCACTTTCGAATACCGGCTGGAAATCGGACGCAAACGCCATTACGATTCCTTGGAAGTCGTGATGAAGGAAGAGCCAGAGGAATTGGAATTCGATGAAGAACCGATCGAGGATTATTCGAATGATTATAAGAGAAGGATATCTGACTCTGATGATTATGATCTTCGAGGTGATTTCTATATAAGAGAGAACAACGAGCAAGAGGAACTGATGCGACCTTTGAAGAAGATGAAGCTAGACtcaaaaaccaaaaagaagatGCAGCAGCGGGAAACCTTCGAGTGCGAGAACTGCAAGATACAGTTTAACACCAAGATTCTTTTTTGGAATCATATCAACGTTTGCCCGAAGCGGAATATGATTACTAAGGAGGAAGTAACAAGTTTCCCGACGTCGATTCTCGAGGCGCATTTAAAGAATAATAACCTGATTAAGAGGGAGGAACCTGAGCATGAACTTGACGAAAATAACTTAAACATTCCAGACTTCAATCTCTTTGAAGACATCAACATGCAGTTGTCGGGTCAGAAACCAGATTCGCGAAAGGTTTACGATGAATCTACAAACACTGAGTGCACTTGCGAAGTTTGCGGGAAGCAGTGGCCTGCGAAGAAACACCTGTGGCAGCATTTGATTCGTTTTCATCGAGCAGAGGCTGCTGTTACTTGTGGGGTTTGCCTGAAACTCTGCACAACTTATGAAGACTTGGCTGATCATCTGAAAGCTGCTCACGAGGCTTTGTTGTCCTGTGAGGGAAATAATTTCACCTGCAAGGTTTGTGGAAGGTATCACAATGCCAGGAGCAAATTGTTGTTGCACATGAGTATTCACATCAACTGCAAGAATAATCCGATGTGCAAGAAGTGCAATCGCAGTTTCGAGACGGAAGCAAAATTGAAGGAGCATATTGGGAATTGCGAGGGAAGACAGTCGGGTTTGGGAATCAGACATGATGCAGAGGAAGATGTGAagaatgataatgataatgatgagAATGATGAGAATGATGAGAATGATGAGAAGGGAAGTTTTATTGGAGATGAGGGTGATGACGGAGACGAGAAAGGAGATTATGAATCGGAGGGAGAGAAGGGTTCTGATAATGAAGATAGTAGCTCGGATGATTCTGAAGATTCAGAAACGGATAGTTCCTCTAGCTCGAGTGATGATGAAGATAATgagaatgaagaagaaaatgaagtaGCGACTGAATCGAGAACTACAAGTAGACTCGGTGAATTGAGTTGCTCGAGTGACAGTGAGGAAGAAGGCTCGGATCATTCGGAAGACCTTGAGGATGCTGATGAGATTAACGCTCATGTTGGGCCTGAAGATGGGAAAGAAGAGTTAAGcagtaaaaaagtgaaaatggaAAGTAGGGGAATTGAGTCGAATCTGGTATTGTCAGAATCTGATACGACAAATTCTGCAGCTTTCGGAGGATTGAAGAAGAAGCCGGTGAAGATGGAAATAGAGAATATGGATTATTCGGATGATGAAGGTCCCCCTGTTTTAAGTCCAATGATGCCATTATTGCCACCACAAGAGGGAGAGATGAATTGCCAGATGGATGAGATGAGTCATAAATTGAGTCCTATGGTGACTTTAGAAACTAAAATGGACAAAGAAATGAAAGATTGTGAGTTTGAAGATGTGAAGATCAAGTTCCAGGACCTTGAGAATAAGAATAAGAAGAGGGAAAATTTGGAGGAATCGGAAGAATCAGAGTCTGAGAGTGAGGATGAGAATAAAATGTGTATCTATGAGGAAGCTGGGAGTCGAGGGGTTAAAGAAGAAGGTTTAAGTACGATCAGTGATGATCAAGAAGATGCAGAAATGCaggAAGAAGAAACTGTAGAGGACAAAAAAACAGAAGTAGTCTCTGCCGAATCTGGAGATGAAAGTGAAAACGAAGAAGAGGAGGAAGAATCCGAAGATGAAAGTGAGCAGGTCCAAATTGCAAACCACAGCAGTCCCGCAACAATCGATCATTCAGAAACTCTTTCACAAGACTTTGAAGGGGAAAATTCAGATCAGGAAGAAGCtgaagaagaagaggaggaagctgaagaagaagaagaagaagaggaggatGCAGAAGAAGCTGAGGAAGCAGAAGAGGATCTCACAGTCGAAAACGCTGAAGTCGAAGAGGAACTAGCCGAGAATCATTCCCTCGTGGAGGAAGAAATCGCAGTAGAAGAAAACTACGAAGACGAACCCATGGTGGATGATGAAATGAACAACGAagatcattccattcaaaacttaaataaaaCCATCCTCACCGTTGGAAAGGATTCTGAAGGCAATCCCATATTGATCCGCGAAGTGGTAACTCAATATGCTTACCAGAACGAATTCGATTGCGAATCCGACTATGCACACCTTCCACAGgagcaaaattctttttttaatacccACGAAGATCAGAGAATATCGGAAGAAAACTTTGGTTTAACTAGTGCTAGTATCGATCAAACCACGACTGAACCGGAAGTCCAGACGGTAGACGAATTAGGTCATCACGAGGAGGTGGAAACCGATGAACAGATTGAAGAAAAAGCTGATAGTGATATCCAAAAGTCAAGAACGAGTGCCAAAAGTTAA
Protein Sequence
MYNLENFYDFRTACVNAVALLESFLSSDNDENDCERRNPSEHYSELRSELLKEKENMPILIPEAPVVNPNAALGTPPRLNSDGEADNDIEEVLEQSGTDETADDAEDRKSEEYEMDMETNPSDFLEMPPMVTDDAEENETVNVPARGRARDSRGFQHKSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCYKAYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRVNLEEHIKSKHTGLPLPIEVPVSYVQPENKYQCKTCPKMYTNTTDLNKHSRVCTASQQKELPNHDTAAEKIKKIQVDTSDMSSNDSANETKDYKNAEAKLAKNPQLTILKQALTKGDVLKRSYDEKYKTSSKTKKHARTNNSETDVQKRWFCESCPQNFTLLESFKEHELLHEAERPYFCLLCEKDFAKKSSLSNHIVTMHGVDPNPIVDSDRCLKKSLLAQQWNKNPELANGETNLVIRKEEASSPYPAIASENEGEDHESNQDKMIEIETVFVCEICTRDFNDRASLWLHIRATHKECAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPSYDPASFVQLNSNYYNENLNSNEGNEQLIDGDVEDGEKVDCYICYKSFPNEDHLIRHQRNAHKSDPAVAIGESTANGSGSGPNGNGNRAQYHLFFVCELCGSSHPSKWERWLHVSSVHGNEPAIKCEREDCAKIFATKSLRNEHAQHHLIQGSSPNTCEICGKLWGSRVDYWKHVMGVHSNTVPLICGVCLKVFPNVHQLSSHVKVNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGESHAHPDPSEYINDSVRLDNGGVVEVNYSCEMCGDLKFMNLEDLCIHRRMTHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRFCMKTSASRDHLAAHIAKIHRYEPEVKNDTKESTNFKVAVPEDKILHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCVHSSCKKLFRTKEDLESHKKDHKYHTSPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDTHESILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFITEESMKNHYEHVHNVPKDQLATFEYRLEIGRKRHYDSLEVVMKEEPEELEFDEEPIEDYSNDYKRRISDSDDYDLRGDFYIRENNEQEELMRPLKKMKLDSKTKKKMQQRETFECENCKIQFNTKILFWNHINVCPKRNMITKEEVTSFPTSILEAHLKNNNLIKREEPEHELDENNLNIPDFNLFEDINMQLSGQKPDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYEDLADHLKAAHEALLSCEGNNFTCKVCGRYHNARSKLLLHMSIHINCKNNPMCKKCNRSFETEAKLKEHIGNCEGRQSGLGIRHDAEEDVKNDNDNDENDENDENDEKGSFIGDEGDDGDEKGDYESEGEKGSDNEDSSSDDSEDSETDSSSSSSDDEDNENEEENEVATESRTTSRLGELSCSSDSEEEGSDHSEDLEDADEINAHVGPEDGKEELSSKKVKMESRGIESNLVLSESDTTNSAAFGGLKKKPVKMEIENMDYSDDEGPPVLSPMMPLLPPQEGEMNCQMDEMSHKLSPMVTLETKMDKEMKDCEFEDVKIKFQDLENKNKKRENLEESEESESESEDENKMCIYEEAGSRGVKEEGLSTISDDQEDAEMQEEETVEDKKTEVVSAESGDESENEEEEEESEDESEQVQIANHSSPATIDHSETLSQDFEGENSDQEEAEEEEEEAEEEEEEEEDAEEAEEAEEDLTVENAEVEEELAENHSLVEEEIAVEENYEDEPMVDDEMNNEDHSIQNLNKTILTVGKDSEGNPILIREVVTQYAYQNEFDCESDYAHLPQEQNSFFNTHEDQRISEENFGLTSASIDQTTTEPEVQTVDELGHHEEVETDEQIEEKADSDIQKSRTSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00089823;
90% Identity
-
80% Identity
-