Aque018642.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000113.1:4060206-4092682[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7e-114 4.8e-110 369.8 31.5 1 300 29 327 29 327 0.96 2 3 0.0054 1.6e+02 3.6 2.9 122 171 327 376 325 380 0.92 3 3 0.12 3.6e+03 -0.8 4.9 135 235 361 398 348 402 0.50
Sequence Information
- Coding Sequence
- ATGGAGTCATCTGTAGCAGGACGGAGGCGAACTGCCACGAGGCATTCTGCCGAAGATCAAGCTCTGGACCAAATTGCCAAAGAGGCAGAAGCAAGATTAGCAGCTAGGCGACAAGCTAGAGCCGAGGCGAGAGAAATTCGTATGCGAGAGTTGGAAAGGCAGCAGAAAGAAGCTGAGGAAAACGCAGACAGGGTGTATGATATGTGCACAGTAGATAGCAGCCGAACGATGAGGGTAACGCCAGATCCTATCAGAACTTCCCGTCttcttgcaaattcaaataacttTCAGTCTAGTCGGAGGTCATCTGAAGATTCTTTGGAAGATGCTGGTCTTGGTAGAGATCCGAGaATAGaactcaaagaatttgaagaaaaattcagaaaagcaATGATTGCTAATGCACAATTGGACAACGAAAAGTCATCGTACGCTTATCAAGTTGATTTATTAAAAGATAAACTAGAAGAGTTGGAAGAAACGGCTGCTCAATTGCGGCGAGAACTGAGGGAAAAAAATCGAGAGGCAGAGCAACTTAAACGCATCAGTCAAAGATTGAAAGAAGACTTAGATATATGCAGAGCTCAATTAATAGAAAGGGATACTTTAATACAGGAAAATGGTTTGGTAATAGTAGAAGACGAAGGAAGTGACGCTGAAGAAACAGAAGGACAAAATGGTCTTCATCCAAGAAGAAGAGTGCTAGTTAGTACAGAGGCAGCAGAAGTATTACAAAACGCGGGAGAAGGCTCTTTAGaTGTACGGCTGAGAAAGTTTGCATCAGAGAAAAAGGAATTACAAGATGAAATTCGTCATTTAAGACTAGAATTAGAAGAGGCCAGAAATCGTATGAGGCCAGAAAGATCTACGGGTTTGGTATTAGGTGGATTGTCCGACTCTGAAGATGTTCAGCGAGAAGCTAATAAATTGATCGCCGAttataaatttaaacttcaaaaggCAGAGCAAGACATGTCAACATTGCAAGCGACAGTTGCCAGGCTAGAGAGTCAAGTGATTCGTTATAAATCATCTGCAGAAGCGTCCGAAAAAGCAGAAGACGAATTAAAAGTAGAGAAGAGAAAACTACAAAGAGAATTCAGAGAATCCCAAGGTCGTGTGGAAGAATTGGAAACGGCAAACACCCATTTGCAACGTAGATTAGATAAGCTAAAGAATGCGAGATCGACTCTTTTGAAGGAGATATGA
- Protein Sequence
- MESSVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTVDSSRTMRVTPDPIRTSRLLANSNNFQSSRRSSEDSLEDAGLGRDPRIELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETAAQLRRELREKNREAEQLKRISQRLKEDLDICRAQLIERDTLIQENGLVIVEDEGSDAEETEGQNGLHPRRRVLVSTEAAEVLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEARNRMRPERSTGLVLGGLSDSEDVQREANKLIADYKFKLQKAEQDMSTLQATVARLESQVIRYKSSAEASEKAEDELKVEKRKLQREFRESQGRVEELETANTHLQRRLDKLKNARSTLLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00460519;
- 80% Identity
- -