Aque011523.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- PAXBP1
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000038.1:45825121-45827250[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-21 1.9e-16 62.8 1.2 78 272 3 165 1 167 0.90 2 2 0.46 2e+04 -2.9 0.1 167 192 194 219 178 231 0.59
Sequence Information
- Coding Sequence
- ATGGAAAGTACGGATTTAGAAAGAACAAAATGGTATAGTTCGTTACTTGTCTACGCTTGGAATAACAAGGAAACTGAAGAGTCCCTGAGAAAAGATCCGGATGTTCGATTAGTTCCATCCTCCATAGAAAAAATCGTTATTCCTAAATTAACTTCTATTGTCGAAAAGATTTGGGACCCCATGTCCACCTCCCAAACTCTTCGCCTAGTAGGAACAGTCAATCGATTAATAAGAGATTATCCGAACATGAACGACACTAGTAAATTGTTGCAGTCGCTTTTCAACGCGATCTTTGATAAAATCCAATCGGCAGTGGAAAATGATGTCTTCATTCCAATTTTCCCTAAACAAGTTTTAGATCCTAAACATCAGTTCTTTCAAAGACAATTTGCGATGGCGGTGAAGCTTCTGAGGAATTTGCTCAGTTGGCAAGGAATTTTAGGAGACAATCGACTGAAGAATTTGGCATTAGGGTCACTCTTGAATCGATATCTTTTAGCTGGATTGAGAGTATCTCCGCCAACTGACGCACTTTCAAAAGCAAATATGATTATGAGTACTCTTCCTCGAGCCTGGCTGCAAGGAGAAACGATTGAACAATTGAAGATGTTCGCCGCTTTAATTCAACAACTGAGTGATCTTTTAGATCAAGCAAATCCGGCTCATAATGAAGCCTGGGAATATTCAAAAGCTATTCTGAAAATAATCAAACCTTCTTGA
- Protein Sequence
- MESTDLERTKWYSSLLVYAWNNKETEESLRKDPDVRLVPSSIEKIVIPKLTSIVEKIWDPMSTSQTLRLVGTVNRLIRDYPNMNDTSKLLQSLFNAIFDKIQSAVENDVFIPIFPKQVLDPKHQFFQRQFAMAVKLLRNLLSWQGILGDNRLKNLALGSLLNRYLLAGLRVSPPTDALSKANMIMSTLPRAWLQGETIEQLKMFAALIQQLSDLLDQANPAHNEAWEYSKAILKIIKPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00684163; iTF_00980117;
- 90% Identity
- iTF_00980117;
- 80% Identity
- -