Aque007707.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000021.1:43284764-43297872[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.002 3.2 9.7 0.0 25 39 323 338 316 342 0.82 2 4 9.7e-12 1.6e-08 36.3 0.1 2 39 354 391 353 394 0.94 3 4 3.5e-18 5.8e-15 56.9 0.0 2 45 409 453 408 453 0.97 4 4 4e-18 6.7e-15 56.7 0.1 1 42 460 502 460 503 0.97
Sequence Information
- Coding Sequence
- ATGATTGATGCTTATAAAGATTTATTGTCTTCTGACAATGCTCTGATGGAAGACTCGAAAGATGTGCTTCAGCGAAGCAGAAGggaagcaaaaagaaaattttgctaCGACGATTCATACGAGAGTTCCCTTGCCTGcgacaaagaagattttaatcaCATTACACTTCAACTTCAGGAAGCTAATTCATTTTTCGGTATGACGAATATCAGTAGGCCGTTCACTTTGGTAAAACGCGAACTTATAGTGAAAGAAGAACTCGAGGAGGTTGAGAATTATCGAGAGCTcacaaaattagatttcaaatatgAGCCTCGCAGGGATGTGGAAGTAGAATTTAAATATGTGAATTCCGACTTTCACGAATCGCAAATCGAAAATTCTCTGTCATCGAATTCTTTGGAAAGTTATCCGACTTTGGTTAAGAACGAATTTATTAAAGAAGAGCCCCAGGAGTTTGAGAATTATCGAGAGTTGAccaaattagattttaaatatgAGCCTCGTGTGGACATGCAGCACATTAAGTACGAAACGGATACGAACTTCTATGCATCCCAGGTCGAAAACTCTCTGTCGTCGAATTCTTTGGAAACCTTCCAGGGTGACATGTTTTGTCACACAGGGCTTGGCCACTACGGACACCATCCAGACCCTGGAGAAGTGGATCTGCCTCCGGAGACACAGCCAACACCACCTAGTGCTACTCTCGTTGGCACCACCATCACACATCTCAGAGACTCGGATCATCAATCTACAGaaatccAAAATTGCGACAGCGTGAAGATAAAGTTCGAGACCTTACACACAATGGACTCCTCGGATACAATAGACATCGACAGCCACATGTCGGACAGAGCAAGTGTGAGTTCCAAAACGGCAGGCGACAACGACAACATGATGATGATAACACCCGAACTTCTTGGTCTGATGCCATCTGGAAATTCCATCCATTCGGATTCTGCAACATTTGGAATACCCTCGACGACACTGTGGCAAAGAGCTCATCGTTTAGGAATCGACACGCCGAAGAAAGACGGACCAACAAAATCGTGGAGCGATGAGAGTCTCAATAACGCTCTTGAAGCACTGAGGACCGGAACAATATCTGCAAATAAGGCATCCAAGGCCTTTGGAATCCCTTCCAGTACCCTGTACAAAATTGCTAGGAGAGAAGGAATCAGACTTGCAGCTCCGTTTAATGCAAGTCCTACAACTTGGTCGCCAGCTGATCTCGATAGGGCTTTGGAGGCAATTAGGTCTGGCCAAACATCGGTCCAGAGAGCGTCGACGGAGTTTGGAATACCAACTGGAACGTTGTATGGAAGGTGCAAAAGGGAAGGAATTGAACTCAGTAGGAGTAATCCTACTCCGTGGAGCGAGGATGCTATGACGGAAGCTCTTGAGGCTGTTAGATTGGGGCACATGAGTATAAACCAAGCTGCTATTCACTACAACTTGCCGTACTCATCTCTGTACGGGCGTTTCAAAAGAGGAAAATACGAAGAGCCAGTAGTCAACGAAATGTCTCAGGATGGTAGCAGTCCTCATTATCACCATCAAAGTCCGAGTCAAAATCACTCCTCTTCCCTTCCCGATCAAATGCCCTATCAGGGCAGCTGA
- Protein Sequence
- MIDAYKDLLSSDNALMEDSKDVLQRSRREAKRKFCYDDSYESSLACDKEDFNHITLQLQEANSFFGMTNISRPFTLVKRELIVKEELEEVENYRELTKLDFKYEPRRDVEVEFKYVNSDFHESQIENSLSSNSLESYPTLVKNEFIKEEPQEFENYRELTKLDFKYEPRVDMQHIKYETDTNFYASQVENSLSSNSLETFQGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDSDHQSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKTAGDNDNMMMITPELLGLMPSGNSIHSDSATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSPHYHHQSPSQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00200667; iTF_00881912;
- 90% Identity
- iTF_00200667;
- 80% Identity
- -