Btre010010.1
Basic Information
- Insect
- Belonocnema treatae
- Gene Symbol
- -
- Assembly
- GCA_010883055.1
- Location
- NC:86928680-86949019[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.4e-12 2.4e-09 36.4 0.0 1 39 337 376 337 380 0.90 2 4 2.8e-12 2.8e-09 36.2 0.1 2 39 392 429 391 432 0.94 3 4 1e-18 1e-15 56.8 0.0 2 45 447 491 446 491 0.97 4 4 1.2e-18 1.2e-15 56.6 0.1 1 42 498 540 498 541 0.97
Sequence Information
- Coding Sequence
- ATGATTGATGCTTATCAAGATTTATTGTCTTCTGACAATGCTCTGATGGAGGACTCCAAAGATGTGCTTCAGCGAAGCAGAAGGgaagcaaaaagaaaattttgctaCGACGATTCATACGAAAGTTCCCTTGCCTGcgacaaagaagattttaatcaCATTACACTTCAACTTCAGGAAGCTAATTCATTTTTCGGTATGACGAATATCAGTAGGCCGTTCACTTTGGTAAAACGCGAACTTATAGTGAAAGAAGAACTCGAGGAGGTTGAGAATTATCGAGAGCTcacaaaattagatttcaaatatgAGCCTCGTAGGGATGTGGAAGTAGAATTTAAATATGTGAATTCCGACTTTCACGAATCGCAAATCGAAAATTCTCTGTCATCGAATTCTTTGGAAAGTTACCCCACTTTGGTTAAGAACGAATTTATTAAAGAAGAGCCCCAGGAGTTTGAAAATTATCGAGAGTTGAccaaattagattttaaatatgaGCCTCGTGTGGACGTGCAGCACATTAAGTACGAAACGGATACGAACTTCTATGCATCCCAGGTTGAAAACTCTCTGTCGTCGAATTCTTTGGAAACCTTCCAGGGGCTTGGCCACTACGGACACCATCCGGACCCTGGCGAAGTGGATCTGCCTCCGGAGACACAGCCAACACCACCTAGTGCTACTCTCGTCGGCACCACCATCACACATCTCAGGGACTCGGACCATCAATCTACAGaaattcaAAATTGCGACAGCGTGAAGATAAAATTCGAGACCTTACACACAATGGACTCCTCGGATACAATAGACATCGACAGCCACATGTCGGACCGAGCGAGTGTGAGTTCCAAAACGGCAGGCGACAACGACAACATGATGATGATAACACCTGAACTTCTTGGTCTGATGCCATCCGGAAATTCCATCCATTCGGATTCTGGTGAGAATAACTCCAGGGGTCATTCTGGCCAATCCGGGTCGCATCACCACGGCTCGAAGTCCTGGACTCAAGAAGATATGGACGCAGCTTTGGACGCCTTGAGAAATCATGACATGAGTCTGACCAAAGCATCTGCAACATTTGGAATACCCTCGACGACTCTCTGGCAAAGAGCGCATCGTTTAGGAATCGACACGCCGAAGAAAGACGGACCAACAAAATCGTGGAGCGACGAGAGTCTCAATAACGCTCTTGAAGCATTGAGGACCGGAACAATATCTGCAAATAAGGCATCCAAGGCCTTTGGAATCCCTTCCAGTACCCTGTACAAAATTGCTAGGCGAGAAGGAATCAGACTTGCAGCTCCGTTTAATGCAAGCCCTACAACTTGGTCGCCAGCTGATCTCGACAGGGCTCTGGAGGCAATTAGGTCTGGCCAAACATCGGTCCAGAGAGCGTCGACGGAGTTTGGAATACCAACTGGAACGTTGTATGGAAGGTGCAAAAGGGAAGGAATTGAACTGAGTAGGAGTAATCCTACTCCGTGGAGCGAGGATGCTATGACGGAAGCTCTTGAGGCTGTTAGattgGGACACATGAGTATAAACCAAGCTGCTATTCACTACAACTTACCGTACTCATCGCTGTACGGGCGTTTCAAAAGAGGAAAATACGAAGAGCCAGTAGTCAATGAAATGTCGCAGGATGGTAGCAGTCCCCATTATCACCATCAAAGTCCGAGTCAAAATCACTCCTCTTCCCTTCCCGATCAAATGCCTTATCAGGGCAGCTGA
- Protein Sequence
- MIDAYQDLLSSDNALMEDSKDVLQRSRREAKRKFCYDDSYESSLACDKEDFNHITLQLQEANSFFGMTNISRPFTLVKRELIVKEELEEVENYRELTKLDFKYEPRRDVEVEFKYVNSDFHESQIENSLSSNSLESYPTLVKNEFIKEEPQEFENYRELTKLDFKYEPRVDVQHIKYETDTNFYASQVENSLSSNSLETFQGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDSDHQSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKTAGDNDNMMMITPELLGLMPSGNSIHSDSGENNSRGHSGQSGSHHHGSKSWTQEDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSPHYHHQSPSQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00089437;
- 90% Identity
- iTF_00089437;
- 80% Identity
- -