Apra016199.1
Basic Information
- Insect
- Andrena praecox
- Gene Symbol
- -
- Assembly
- GCA_963932275.1
- Location
- OZ010729.1:6669534-6669929[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-09 4.9e-06 27.2 0.0 2 42 12 52 11 55 0.90 2 2 9.1 4.6e+03 -1.5 0.0 23 30 101 108 100 109 0.86
Sequence Information
- Coding Sequence
- ATGACGACAAGGCGAAAGTACGGGAAATGGAATGAAGACGAACTACAAAAGGCCATTATAGCTTACGAAAACGGTGACTATGGTTTAAATGAGTGTAGCAGGGTGTATGGAGTGCCAAAAGCCACACTGAAGCGACATTCCGCGAAAAAAAACTCATATGCGAATGGTATAAAGGCTCTGGGTAAGCCACCCACGTTCTCTTTAAATCTGGAGAAGATTTTATCGGACCACATTCTAACATTAGAAGAATGCTTTTTTGGATTAACAATTAAAGATGTGCGAAAACTCGCATTTGATCTAGCGGAAAAATATAACCTTCCCCATGCATTCAATACGGAGAAAAAGATGGCAGGGAAAAAATGGTTTTACGCATTTATACTTCACTCGCAAGAGTAA
- Protein Sequence
- MTTRRKYGKWNEDELQKAIIAYENGDYGLNECSRVYGVPKATLKRHSAKKNSYANGIKALGKPPTFSLNLEKILSDHILTLEECFFGLTIKDVRKLAFDLAEKYNLPHAFNTEKKMAGKKWFYAFILHSQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00087877;
- 90% Identity
- iTF_00087901;
- 80% Identity
- -