Apra026276.1
Basic Information
- Insect
- Andrena praecox
- Gene Symbol
- -
- Assembly
- GCA_963932275.1
- Location
- OZ010731.1:36187521-36189455[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-10 1.2e-07 32.4 0.1 1 37 15 52 15 57 0.92
Sequence Information
- Coding Sequence
- ATGGTTAGAAACTACAAAAGAAAGACGGACCGAGGAAAATGGTCAGAAGAAGCGATGCAAAACGCATGTAGGGCTGTATTAGAAGGCAGGATGGGATATTACCGAGCAGCAGAAACATATTCAGTCCCACAGAGTACGTTGGAAAGAAAAGTAAAACTAGCTCGGGAAaataataatacttttcaagaagTAAAGGTATCTTTGGGGCCAAAGTCTCCGATATTTTCAGCTACAGAAGAAGCAGAGTTAGTCCAATATTTACAAGATATGGAAAGCAGACTTTTCGGACTAACGACTGACGATTTAAAGTCTTTAGCTTACGAATTAGCAACGAGAAACAAGAAAGATCACCCTTTCAACAAAAATAAAGGTAAAGCTGGCAAGGACTGGTTACTCagttttttaaaccgtcacccGGAACTAGCCATTAGGAAACCGGAAAACACGTCAGCAGCCAGAGCTGCCGGTTTCAATAAAGCTGCTGTTGACAGATTTTTTACATTATTGGGCGAGATCTATGATAAACACAAATTAACTCCTGATCGTATATTTAATTGTGATGAGACCGGGGTATCAGTTGTTCCGAAAACAAAATGTAAAATAATAGCCAAAACAGGCCGGAAACAAGTGGGTGCATTGGTTTCTGCTGAGCGAGGTCAAACTATCACAATCGAAATATGCTTCAGCGCAAGTGGTCAGTACATGCCTCCAATGTTAGTGTTCCCTCGTAAGCGGATGAAAGCAGAATTAATGGTAAATGCTTCTCCGGGTGCTTGGGGTGTGTGCAGTGACTCTGAATGGATGACTGCCGAGCTATTTTTGCAGTGGTTTgggaaattcatttctttcagCCGAGCATCCAAAGAAAATCCCATTTTATTGCTGCTGGATGGTCACTGCACCCACACAAAAAACTTACAAGTCATTGAGGAAGCAAGAGCAAATGGCGTTATTATATTGTGCTTTCCACCCCACACTACACATCGTCTACAGCCACTCGATGTAGCGTTTATGAAACCTGTAAGCACATATTATGATCAGACAATATCATCGTGGCTTCGTTCAAATCCAGGATGCGTAGTTACTACATTTCAAGTGGCGGAGCTGTTTGGCAAAGCTTTTATTCGGGCAGCGACTATGCAAACTGCCATCAATGGTTTTAAAAAATGCGGGATCTGGCCATTTGATTCCACTGTTTTTACAGAAGTTGATTTTATCGCTTCTATGACAACTGACATTCCTTTAAATGAAAGGACAGATCTTGGTTCAAACATTAATATACAAAGTGAAGCAGCGGAACCGGAACCAATGCAGTCACCCATAGAACAGACCACAGATCAAATGACTGATTCTCAACCTGGTTGTTCATATTGGCCTGATAGGCAGAATAAGACCCCTGAACCAAACAATGATACGTCGTTTCTATTTACTAGCCCACAAGAATTAATTCCCGTGCCAGTCGCACAGCAAAAGTCTCGTGTATCGAGAAAACGTGGGAGAACTGAAATTATAACATCGTCACCATATAAACGTGAACTCGAAATGGTCATCATAAAGAAAAACAAAACAGAAAAGgagaaagaagagaaaatgaaATTAAAAGAATCATCAAACTTGAAACTAAAAGGAAAGGGAAAAGAAAAAggtaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaagaaGAAGTCAGAAGAAAACGCCAAAGAAGACGAAAATCCTTCATGTTTATATTGCGATGGGCTCTATTTAGAATCTATGGAAGGATGGATAAGCTGCCAAGTATGTGGCAAATGGGCCCATTTGTCCTGTGCTGACGTAGGAGATGAGGACGATAACGATATACATGTGTGCCTCTTCTGTgaagcaaataaataa
- Protein Sequence
- MVRNYKRKTDRGKWSEEAMQNACRAVLEGRMGYYRAAETYSVPQSTLERKVKLARENNNTFQEVKVSLGPKSPIFSATEEAELVQYLQDMESRLFGLTTDDLKSLAYELATRNKKDHPFNKNKGKAGKDWLLSFLNRHPELAIRKPENTSAARAAGFNKAAVDRFFTLLGEIYDKHKLTPDRIFNCDETGVSVVPKTKCKIIAKTGRKQVGALVSAERGQTITIEICFSASGQYMPPMLVFPRKRMKAELMVNASPGAWGVCSDSEWMTAELFLQWFGKFISFSRASKENPILLLLDGHCTHTKNLQVIEEARANGVIILCFPPHTTHRLQPLDVAFMKPVSTYYDQTISSWLRSNPGCVVTTFQVAELFGKAFIRAATMQTAINGFKKCGIWPFDSTVFTEVDFIASMTTDIPLNERTDLGSNINIQSEAAEPEPMQSPIEQTTDQMTDSQPGCSYWPDRQNKTPEPNNDTSFLFTSPQELIPVPVAQQKSRVSRKRGRTEIITSSPYKRELEMVIIKKNKTEKEKEEKMKLKESSNLKLKGKGKEKGKGKGKGKGKGKGKGKGKGKGKGKGKGKGKGKKKSEENAKEDENPSCLYCDGLYLESMEGWISCQVCGKWAHLSCADVGDEDDNDIHVCLFCEANK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00087045;
- 90% Identity
- iTF_00088724;
- 80% Identity
- -