Basic Information

Insect: Andrena marginata
Gene Symbol: RREB1
Assembly: GCA_963932335.1
Location: OZ010660.1:3635291-3641752[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0061 0.5 11.2 0.1 1 23 73 95 73 95 0.96

2 16 0.0002 0.017 15.9 0.4 1 23 110 132 110 132 0.97

3 16 8.9e-07 7.3e-05 23.3 1.2 1 23 138 161 138 161 0.98

4 16 0.013 1.1 10.2 0.0 1 23 255 279 255 279 0.95

5 16 0.37 30 5.6 2.1 2 23 285 307 285 307 0.94

6 16 2.4 1.9e+02 3.1 0.6 1 19 363 381 363 382 0.89

7 16 0.21 17 6.4 0.1 1 23 497 519 497 519 0.96

8 16 3.2e-05 0.0026 18.4 0.3 1 23 528 550 528 550 0.98

9 16 0.0014 0.11 13.2 2.8 1 23 556 579 556 579 0.97

10 16 0.00051 0.042 14.6 3.0 1 23 951 974 951 974 0.97

11 16 0.00073 0.06 14.1 0.1 3 23 1254 1274 1252 1274 0.97

12 16 0.65 54 4.8 6.0 1 23 1280 1303 1280 1303 0.97

13 16 0.0046 0.38 11.6 2.2 1 23 1342 1366 1342 1366 0.97

14 16 0.55 45 5.1 4.9 1 23 1448 1471 1448 1471 0.96

15 16 0.012 1 10.2 0.4 2 23 1522 1543 1521 1543 0.94

16 16 0.0003 0.025 15.3 4.6 1 23 1549 1571 1549 1571 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0061	0.5	11.2	0.1	1	23	73	95	73	95	0.96
2	16	0.0002	0.017	15.9	0.4	1	23	110	132	110	132	0.97
3	16	8.9e-07	7.3e-05	23.3	1.2	1	23	138	161	138	161	0.98
4	16	0.013	1.1	10.2	0.0	1	23	255	279	255	279	0.95
5	16	0.37	30	5.6	2.1	2	23	285	307	285	307	0.94
6	16	2.4	1.9e+02	3.1	0.6	1	19	363	381	363	382	0.89
7	16	0.21	17	6.4	0.1	1	23	497	519	497	519	0.96
8	16	3.2e-05	0.0026	18.4	0.3	1	23	528	550	528	550	0.98
9	16	0.0014	0.11	13.2	2.8	1	23	556	579	556	579	0.97
10	16	0.00051	0.042	14.6	3.0	1	23	951	974	951	974	0.97
11	16	0.00073	0.06	14.1	0.1	3	23	1254	1274	1252	1274	0.97
12	16	0.65	54	4.8	6.0	1	23	1280	1303	1280	1303	0.97
13	16	0.0046	0.38	11.6	2.2	1	23	1342	1366	1342	1366	0.97
14	16	0.55	45	5.1	4.9	1	23	1448	1471	1448	1471	0.96
15	16	0.012	1	10.2	0.4	2	23	1522	1543	1521	1543	0.94
16	16	0.0003	0.025	15.3	4.6	1	23	1549	1571	1549	1571	0.98

Sequence Information

Coding Sequence: ATGGTAAGATCGCAGTGCCGCGTTCTCTTCTCGCGAGTCACTTTTATCATCCTCGGTATCAATCTCGGAAGTGCCTGCTCCAGCCTTGCCTCCAGGTCCTTGGAGCCGCTTGCAGAGGCGCTTACTGTCAAGGGTAGTCCCGATCAGGGACACGACAACGAAGCACAAGCGGATGCTGCATCGCCACCGTCGAGTGTCGAGCTGCCAGAAAGCGCGCACCCCTGCCCCGCCTGTCCGACAGTGCTGCCCAGCTCTAGGGAGCTGACGAACCACCTGCGTGGCCACAACTCGCCCCGCAGCGGGACAGACTGCAGCGGCGAGGACGACTATTGCTGCGGGATATGCAACAAGGTGCTGAGCTCGGCGAGCTCCCTCGACAGGCACGTGCTGGTGCACTCCGGCGAGCGACCGTTCAAGTGCAAGTACTGCGAGATGGCGTTCACCACGAACGGCAACATGAACAGGCACCTGAGGACCGCGCATCGTTCCGCCTCGCCGCACAGCTGCACCGACTCGGAAGGTAGCAGCGACTCCGAGAAGCCGCCGACGAAGAGGCGGCACATCGACGAGTACAACAACAACGAGATAGCCAAGAGGAACTCGCCGGAATTGATCGACAGACAGTCGAAGTCCCCGAGCCTGGCGGGTAAACGGAAGTGCTCGGACTTCCTCAGCGACAACGAGGGCCAGAAGAGGCACAAGATCCTGCTGAACAGCTCCAGGACGGAGATGAAGTCCCGGCCGGACGACAGCCAGAACGTGTACAACTGCCCGGTATGCGGCCGGCAAGACTTCGCCACCAGCGCCCTGCTGGAAGCGCACCTCGAGCGCAGCCATCCGGAATTCCCCGCGAAATGCGACGCCTGCAATCTGTCCTTCAAGAACCACCGGGTGCTGAACCTGCACCGTTTCATGATCCATTTCGCGGAGCATTCAATCGGGAACACCGCGAGGAACCTGAGGAACTCGGTGGTGGGCTTCAACGATCTCACCTTCGTGGACTTCTCGTCGGACAAGTTCCCGGCGATCGCCAGAGCCGTCTGCGAGCAGTCCTTGCACCGGCCCGCCTCCGGGGAGGTAGCCAAGTTCCAGTGCTCCAAGTGCCTGCGAGCGTTCCCGTGCAGGTCCGCGTTGGACGCCCACGAGGTGGACTGCGGCACCGCGAATACTCAGGCTAGAATGAACGACGACAACCAGTCGAGGAGAGACGACTTCTTCGCGGGCCTGGACCTGCAGAACAAGGCCGCGCTCACGGAGGCCAAAGAGGGCAAGGACTTGGCCGACATACAGAGCATCATATCCGTCACGTCAGGCCCGATACTGCAGAACTTCCCCCGGTCAGACGCTAGCACGCCCGAGAACAACGTCAAGTTCAATCCCAGCGTCAGCTCGTCCGGCTCCTCCGGCACGCTCTCCTCCGAGTACCACGAGGAGGAGACGCAGGACGCGTTCGCGGCCGAGTTCAGGAAGATGAAGCTGAAGGGCGAGTTCCCCTGCAGGCTCTGCACAGCGATATTCCCGAATCTCAGAGCGCTCAAGGGCCACAACAGGGCGCACATGGGCGTCGGCCCCGGGATGCCCTACCCGTGCAACATGTGCCCTTACACAAGCACGGACAAAGCCACCCTGGTGAGGCACCTCAGGTCCCACAACGGCGACAGGCCCTACGAGTGCTCCCTCTGTAACTACGCCTTCACCACAAAAGCGAACTGTGAGCGCCACGTGCGCAATCGCCACGGCAAGCTGACCAGGGAGGACATCAAGAGCGTGCTGATCTACCATCCGAACGAGGACTCGACGAACGAGAGCGTGGAGAGGACCTCGCCCAGGGTGATGAAGGACGACGTGAGGAAGAGCCTGGTCTACCCAATCGAGCGCGACGAGCTCCAGCTACAGACGCAGCTGCACTATCCCCAGGTGCCAATTGAGGGCCGCGGAGAGATCAGGATAATCGAGGAGGCGAAGCTGCACAACACCGCGATGTCGATGCACAACCATTACGAGAAGGGCGAGGCGTTCTCCAGGCCGGTACAGCCGATCGAGCTGACGCAACGGAGCCTGGACGACGGGAAGGACGCCAAGCTGGAGGAGGATCTCGAGTCAAGGTCGTCGGAGGGCAGCGTGTCTCTAGTCAGTGATACCAAATCAGATTCGCACCAAAGAATACAAGCTAGTCCGATGAACCTGAAGAAGGGCCGCAGCGTGTCCGAGAACGCCGGCGAGGACGGCCCGCTGGATCTGTCGATGGACGTGCTTGACCTCAGCAAGAAGTCCAAGGACAAGGAGGACGCTGACTTCGCCACCTCGCAGGACCAGTTCGGCAAGAGCCAGAAGGATCTCTACAACGCTACTAGCCAATTGCTATTGACAGAGGCTCTGCTGAAGGCTGGACAGGGGAGCTCCCAGCCGACCTCCCTGGAGGCCCTCTACGCGAACGCCCACTTGATCTATCGGAACTTCGGGACGTTCTCGGCTGGCGTTGGGGCGGGTATTCTACCACCTTATATGTTCAACCCTCATGTCTTCGGGCAGGACTTTACGATGAAGGATAGACTGCAGAAGGAGCTGGTGAGGGGCCTGCAGTTGACTAGCGGTGGTACCTTGGTGGAGCCCACTATCGGTGGACCGGGATTCGCTGCGTTTGCGCAAGCTAGGGACATGAACAGCCAGTCTAGCAACGAGCAGAGCGAGTACGCGAAGCTGATCTCGTCGAAGATCGCCAGCAAGGCTCTGTCGAACCGCGAGAAGCCGGAGAATCATATACCGTCGTCGAACTCCGTGAAGATGGTGATCAAGAACGGCGTGCTGATGCCCAAACAGAAGCAACGGAGGTACAGGACCGAGAGACCGTTCACGTGCGAGCATTGCTCGGCGAGATTCACCCTGAGAAGCAACATGGAGAGACACATCAAGCAGCAGCATCCTCAGCACTGGAGCCAGAGACCCAGAGGGGGGCATTCCACCAGAGGCAGGCCACCGTCCAGCCATCCGACGTTGTTGCAGAATCTTGGCCAGCCTGCGTCGCAGGTGGCGCAATCCTACCAAAGTATCCTGCCTAAGGCGGACCAGTCGGCGAGCTCCGAGCACACGAAGCACCCCATCTCGGACCAAGTGAAGTACGCGATTCTGGCGCAGCAGTTGAAAGCCAACAAGGTGGAAGAGAATGACTCGGAGGAGGAGCTGGTGATCGACGAGGATCCAGGAGAGAAAGATGCACAGGAATCTCAGGAGCAGAAGAAAGAAAGCTCCAGTTTGCTGAGGGAGCAGTTGGAGGGCTCGGAATCTGCCAAGGAGCCTGTCGCGAAGGACGAGGCTGAGGAATCCACGAAGGATGCGACGGAATCGATTCACGCCGAGTCGACGAAGGACGAGGACGCTGCTGAAGAGATGAAGAGCTCGGACACTGAGAGGCCCGCGGAGGCAGACGACAGCAGCGAGAATGGAGAGGATACAGAGTTCAAGGCAGAGCTGGACGACGACAAGTCTGAGAAGATGGAGGATGGCGCGACGGATCTGGCGAGCGTCTCAGAATTGCTGGACAATGCTTCTCAACAGTATCAGCAATTCCAGCCGCAGTATCTGAGCGACGAGGAAGGTTTAGTCGCGTCCCATAGCGACTGCAACAACTCCGGCAGCGACGAGAAATCCGACTCCGTGAATTCGTTGAACTCCGTCAACGCGTCGtctaagaagaagaagaaaaagaagaagaagaagaagaagaaatctgCCTACTCCATGGCGCCTAACCGGGTGATCTGCCCGTACTGCGAGCGGCCGTTCCCCTGGACCTCGTCCCTGAGGAGACACATCTTAACTCACACTGGACAGAAGCCCTACCAGTGCGTTCATTGCTCGCTTCTCTTCACCACCAAGTCCAACTGCGACCGTCACCTGCTGAGAAAGCACAAAGCGAACCCCAACAAGATACGCAGGGTCAGGAACTCCTCCTCTCCCGACTCCCAAGCAGTGATCAGCAACAATAACTCCTCCTTCTCTATGAggaacgtgcctgagagaccgTACAAGTGCAACCAGTGCCCGAGCTCGACCTTCTCCACCCTGGGCAACCTGAAGAAGCATCGCTCGACGAAGCACGCGCGCAAGATGAAGTCCAGGTCCGGCACTCCGTCCAGCGAGCCTCAGAACAGCCCCCGGGAGTGCCCGAAGCAAGAGCAGAGCGACTACGATAGCCAGTCGTCGAGCGTATCGGAGGGCATGGACACCTCCTCGGTCACTGGGATCCCTAAATCGAACTCCAACACCTCGACGTCCACCAACGATACCCCTAGGTCCAGAAGACCCTCCCCAAGATCGTCGCCAGGACCCAGCGACGTGCCCTTCAAGTGCCACCTGTGCGACTGCGGTTTCGCCGACCGACAGGACTGTCTCGATCACATCAAGGTGAACCACAAGAGGTCGTACGAGATGCTGGTAGCCAAGGGTGCGCTGGACATGGACTTCGAGACAGCGGAGGACCAGCAACAGGCTGCTGCGACGCAGCATACCAGCGATGGAGAAGAGAAGAGAGGGCGTTTCCCTGACTACAGTAACAGAAAGGTGGTCTGCGCGTTCTGCATGAGGCGATTCTGGTCCGCCGAGGACCTGCGCCGCCACATGAGGACGCACACGGGGGAGAGGCCGTTCTCCTGCGACATATGCGGCAGGAGATTCACCTTGAAGCACAGCATGCTGCGCCACAGGAAGAAGCACGAGTCCATCGACTCGACCATGTACGTGGGCACCAGCGGGGACGAGGAGAACTCGCCCACGCAGCCGCCCACCATCGCGCCCCGGAGCCAACAGCAACCACCCGTTTTAGTGGCGGCCAACACTGGCAATCCCAGGGTCCAGGACAGAATCTCGTTGCCGATTGTCGCCCCGGTTGCCACCGGGGACGCCGCGCCCAGCGGGCTCATGAGATTCAACCCCTACGAGAAGCTGGCCACGTTGACTGGAAAGCTGGCCAGCATCCCCCAGAACGTGAACCCAGAGGCTACCGAGAGCGCGGACAACGACTTGATCTCCAATCTTCTGGGGATACGGGACAAGAGCTTCATCGACAGGGTCCTCCAAGCATCGGCTGACGACGCTGCCAAGCTGTTGGGGGTGAAACGCAGCCACGAGTGA
Protein Sequence: MVRSQCRVLFSRVTFIILGINLGSACSSLASRSLEPLAEALTVKGSPDQGHDNEAQADAASPPSSVELPESAHPCPACPTVLPSSRELTNHLRGHNSPRSGTDCSGEDDYCCGICNKVLSSASSLDRHVLVHSGERPFKCKYCEMAFTTNGNMNRHLRTAHRSASPHSCTDSEGSSDSEKPPTKRRHIDEYNNNEIAKRNSPELIDRQSKSPSLAGKRKCSDFLSDNEGQKRHKILLNSSRTEMKSRPDDSQNVYNCPVCGRQDFATSALLEAHLERSHPEFPAKCDACNLSFKNHRVLNLHRFMIHFAEHSIGNTARNLRNSVVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRSALDAHEVDCGTANTQARMNDDNQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPENNVKFNPSVSSSGSSGTLSSEYHEEETQDAFAAEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNESVERTSPRVMKDDVRKSLVYPIERDELQLQTQLHYPQVPIEGRGEIRIIEEAKLHNTAMSMHNHYEKGEAFSRPVQPIELTQRSLDDGKDAKLEEDLESRSSEGSVSLVSDTKSDSHQRIQASPMNLKKGRSVSENAGEDGPLDLSMDVLDLSKKSKDKEDADFATSQDQFGKSQKDLYNATSQLLLTEALLKAGQGSSQPTSLEALYANAHLIYRNFGTFSAGVGAGILPPYMFNPHVFGQDFTMKDRLQKELVRGLQLTSGGTLVEPTIGGPGFAAFAQARDMNSQSSNEQSEYAKLISSKIASKALSNREKPENHIPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPSSHPTLLQNLGQPASQVAQSYQSILPKADQSASSEHTKHPISDQVKYAILAQQLKANKVEENDSEEELVIDEDPGEKDAQESQEQKKESSSLLREQLEGSESAKEPVAKDEAEESTKDATESIHAESTKDEDAAEEMKSSDTERPAEADDSSENGEDTEFKAELDDDKSEKMEDGATDLASVSELLDNASQQYQQFQPQYLSDEEGLVASHSDCNNSGSDEKSDSVNSLNSVNASSKKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKIRRVRNSSSPDSQAVISNNNSSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKMKSRSGTPSSEPQNSPRECPKQEQSDYDSQSSSVSEGMDTSSVTGIPKSNSNTSTSTNDTPRSRRPSPRSSPGPSDVPFKCHLCDCGFADRQDCLDHIKVNHKRSYEMLVAKGALDMDFETAEDQQQAAATQHTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICGRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPTQPPTIAPRSQQQPPVLVAANTGNPRVQDRISLPIVAPVATGDAAPSGLMRFNPYEKLATLTGKLASIPQNVNPEATESADNDLISNLLGIRDKSFIDRVLQASADDAAKLLGVKRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00625690;
90% Identity: iTF_00086608;
80% Identity: -