Basic Information

Insect: Andrena camellia
Gene Symbol: -
Assembly: GCA_029448645.1
Location: CM055676.1:23615199-23626979[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 8.8e-05 0.0084 17.0 0.4 1 20 141 160 141 162 0.95

2 22 0.74 71 4.6 0.1 5 20 168 183 167 185 0.92

3 22 0.28 27 6.0 5.0 1 23 198 221 198 221 0.93

4 22 9.6e-06 0.00092 20.0 1.7 1 23 536 559 536 559 0.95

5 22 3.4 3.2e+02 2.6 0.3 5 23 566 585 565 585 0.93

6 22 0.93 89 4.3 2.9 2 23 592 613 591 613 0.96

7 22 1.2 1.2e+02 4.0 7.3 1 23 640 663 640 663 0.96

8 22 0.00083 0.08 13.9 1.3 1 22 779 800 779 800 0.96

9 22 2.2e-05 0.0021 18.9 0.5 3 23 809 830 808 830 0.95

10 22 0.0076 0.73 10.9 3.5 1 23 840 863 840 863 0.95

11 22 2 1.9e+02 3.2 0.1 2 19 886 903 885 906 0.88

12 22 0.017 1.7 9.8 5.1 1 23 947 970 947 970 0.94

13 22 0.00087 0.083 13.8 0.2 1 19 1016 1034 1016 1036 0.96

14 22 0.075 7.2 7.8 3.9 1 23 1044 1067 1044 1067 0.94

15 22 0.091 8.7 7.5 0.1 2 20 1138 1156 1137 1158 0.92

16 22 0.0048 0.46 11.5 1.3 1 23 1165 1187 1165 1187 0.98

17 22 0.015 1.5 9.9 2.7 1 23 1197 1220 1197 1220 0.92

18 22 5.5e-05 0.0053 17.6 0.9 2 21 1313 1332 1313 1333 0.95

19 22 2.7e-05 0.0026 18.6 2.1 1 23 1340 1362 1340 1362 0.98

20 22 0.0068 0.65 11.0 1.3 1 21 1373 1393 1373 1396 0.87

21 22 0.19 18 6.5 2.0 1 21 1533 1553 1533 1556 0.90

22 22 0.025 2.4 9.3 2.2 3 23 1578 1599 1576 1599 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	8.8e-05	0.0084	17.0	0.4	1	20	141	160	141	162	0.95
2	22	0.74	71	4.6	0.1	5	20	168	183	167	185	0.92
3	22	0.28	27	6.0	5.0	1	23	198	221	198	221	0.93
4	22	9.6e-06	0.00092	20.0	1.7	1	23	536	559	536	559	0.95
5	22	3.4	3.2e+02	2.6	0.3	5	23	566	585	565	585	0.93
6	22	0.93	89	4.3	2.9	2	23	592	613	591	613	0.96
7	22	1.2	1.2e+02	4.0	7.3	1	23	640	663	640	663	0.96
8	22	0.00083	0.08	13.9	1.3	1	22	779	800	779	800	0.96
9	22	2.2e-05	0.0021	18.9	0.5	3	23	809	830	808	830	0.95
10	22	0.0076	0.73	10.9	3.5	1	23	840	863	840	863	0.95
11	22	2	1.9e+02	3.2	0.1	2	19	886	903	885	906	0.88
12	22	0.017	1.7	9.8	5.1	1	23	947	970	947	970	0.94
13	22	0.00087	0.083	13.8	0.2	1	19	1016	1034	1016	1036	0.96
14	22	0.075	7.2	7.8	3.9	1	23	1044	1067	1044	1067	0.94
15	22	0.091	8.7	7.5	0.1	2	20	1138	1156	1137	1158	0.92
16	22	0.0048	0.46	11.5	1.3	1	23	1165	1187	1165	1187	0.98
17	22	0.015	1.5	9.9	2.7	1	23	1197	1220	1197	1220	0.92
18	22	5.5e-05	0.0053	17.6	0.9	2	21	1313	1332	1313	1333	0.95
19	22	2.7e-05	0.0026	18.6	2.1	1	23	1340	1362	1340	1362	0.98
20	22	0.0068	0.65	11.0	1.3	1	21	1373	1393	1373	1396	0.87
21	22	0.19	18	6.5	2.0	1	21	1533	1553	1533	1556	0.90
22	22	0.025	2.4	9.3	2.2	3	23	1578	1599	1576	1599	0.95

Sequence Information

Coding Sequence: ATGGCTCGTGTTGTTGTATACGAACGCGCAGTTGACGCCGTCCTCACCGATGTGACGTTCTACGAGAAATTGAACcGGCccctaaatggaataaagattaaAGAAGAACCATTGGATCCGGACATCGACGGTCCTTCGTCAGTTAGCAACGCAGCTGAAGCGGATCAACGTAGATCACCACCACTCGAAGATCAACATTCGAATAGTTTGAACAACAAAGAGAATGAAAGCACATCAGTCAAGTACCATGCGGATCCAAGAACTACCAAATCAAATCCCGATAGAAAAAAGCGTAAACGCTCGTCGCCAAGGAACACGAGGGGTGAGAATTCGCATCCCTCGAAGAAGCATAGATCGCACATGCGGAGGGGGCTGGATGCTAAAGACTACCAACGGAAAAGGCGGCCACCAGCCTTCTTATACCAATGTGACGTGTGCTGGATAACCTTTCGCACACAACGAACGTTGAAACGTCACAAGGCCTCGCTCACCAAATTTGATAAATGCGGCTCAGTGTACTCTTCGACTTCCTCGTTATTCAAACACAAAGAATTGTGTGCACGGAGTCAGCAATCGAATAAAGGAAATAGATATTATTGTAACTTCTGCAAACGAGATTTCGGGGGGAAGACATATCTGCAGCAACATCTGTTCCACTTCCACGACGATGTGATACTGCCCCCTGAAATCGTCGTTGACAAAACACAGCCCAACACGGACATAACCCAAACCACTAAGAGTCTCGTAGCAGACGTTCGTACATCAACGCCTGAACAAACGCCAGAAAAGTTGATGGACAGCCCAAGCAGTACATCCGCGAAGAAAATGAGGCAAACTACCCTTACAGAGTTTCTTTCGCTGTTTGGTAAGCACAACGAGAAGGACCAGAAACAAGGGTGCGTTAGTCCTCGGCGGAGTGGTGTAGCGACTAATCAGGGTCTAACACTTCGTAGTAATACAAATGCATTACCTTGCGACGCGGCAACAACAGCAAAGGCTACCGACAGTTCTGCCCCAGCTGGGCCCACTGCCAATCAATCTCCCACCAGCAAAAGACCATTCGTTGAAATCCACGTGGATACGAACATGATGATGTCGTTGCTAAACACTAAGGTAAAAACTGAACCCGAGGACGTTTGCGTCCCCGCCACGTCGCACAACACGTCTTACAATCTCAGACGGCCGAGAACTGATTCTACACGGTCATCCTTCGAGCAAGACCATGGGTCTTCTCATCTAAAGAAGAGGACAAGGAGAACCACCCAAAGTTATCGGAGGGATATAGTGTCTTGGGAACGACAGATGAGGGCTAAGTTCGGGTGTAGAGAATGCGTAGTTCGTATAGAGAAATGCTGTCTGTCCTCGACAATTGAGAAGACCGCTGATGAACCTGAAACTATTCCTCTGCAGGAGAGCGCGCTAAAAGCTGAAGGAAACTCTGAAATCGGTCGCAGAAGGAGCGTAAGAACCTTATTCGCGAGGAACCTAGAAGCGCCTCTGATTGAAACGAACAAGGACCCGACGAACACTGTAGTGAAGCCTGAAATAGATCCAAAGATAACGCACGAGTCGAAGAACAGCGACAAAGAAGACGAGCACAAGGCGTTTCAGTGCAAAGTCTGCAAGAAATCGTTCTCTTCGAAAGAGAACATACGCGAGCACATGGAGCTGTTTCACATGGCGTACATATCGAGCGTGTGCAGCGCGCGTTACACATCCATGAGCAAATTACTCAGCCACTATCTACGTCAGCACGCGGTTTTTAGACGGATGCAGTGCTGCGTGTGCTACGAGAAATTCGAGAAGCGCATGCAGGCGAAGCAACATATGTCCCTCCACTGCATCAAAGTCATACGGACCAAGAACGACAACCTGCCGATCGGTAGCCAAACAGGGTGTAACATGTTCAAGAAGCAACACGAGTGCAGAGGTTGCAGCAAGCGGTTTTGGTTGCAATCGTGCTTGCAGCAGCATCAGAAGGTGTGCCATCGATCGAAGGACAACAGGAAGAATGTTGTTTCTCCTTCGCAGAAACACGCAGCGGGTACTGCAAAGTCCAGTGCTGGGCATGTTAGCCGCGACTTCGAGGTGCCAGGGCGACAACTGAGTGACTGTTCGATCCAGACACGCGAAAATACGAAAATACCGGGTGCAGTGGATAATCACGACTTTCAAACGAACTTAGATTCAAGGAGTCTTGACAGTGGCTCAGCGTCTACACCTCAACGAAAGGCGGCACAGTCACGAAAGGTTGTCAATCACAGAAGGCTGGTGAATGGAATGGCGTGCGTGAAAGGCTACCAAACCGACCTGACAGGCACGGATAAAGAGAGATTCCCCTGCTCCATCTGCGGCAAACAGTTTCAATCATTCCAAAACCTGTGCATACACGAGCGCACCTTCTGCAAACCTAACGATAGCCTGTGCAGCGTCTGCGGTACATCGTTCTCCACCAAGAGGTTGTTGCAGCAGCACATGCTGGCGACTCACACGCCCACGTGCAAGGAAGGCTACAAATTCTTCTGCAAATTTTGTAACCAAGGCTTCATCAAGAGGGCTAATCTTCAGATCCACGAGCGACACTTCCACACGAATCGGAGCTCCATGGATCCCAACTCTTGGTCgcacaacgaacgtacccgcaACGTGAACACAGTGTGCACCGTGTGCAACCTGATGTTCGAGTCGTACGAGCGGTTCATCGAGCACAACATGTACTACTACCAGGGCCAGATCTTCACGTGTGCGTTTTGCAGCCAATCGTTTCAGGGCATGTACATGCTTCACCACCACAACAAACTGACGCATTATCCGGAGGGGACGCGTAACGCGTACACCTACACCTGCGACACCTGCAACGAGGGATTCAATCAGGAGTCCCATTTCCACGCGCACAAGTTGCACGTCCATTTTCACGAGACCTGTCCCGCGCAGGACAGCCTCAGGACCATACAAGATCAGACCTGCCAGGACCACAGCTACGCATTGACGGCCAATAACGTTACATCAGCCGACCCGACCACAGTGCGGGTGCCCATCATGGCGTACACTTGCGAGGTCTGCAGCCTGAGCTTTACCAACCAGAGGGACCTGTCCGCGCACGAAACGGAGTACTCCGATGAAGGAGACTTTCAGTGCAGCAAGTGTAACAGGAGGTGCCCGACAGCCACCGTTCTCGCCAAGCATCATAGCTTGAACCATAGCGGCAATGACATCAGCCACTGTTACAAATGTCGCTCTTGCGGCGAGGTGCTGACCACAAACACTGCGATGGTGTGCCATGAGAAACACTTTCACACAGCGAGCAACGTTGATCGGAAAATCAGGTACAACGCGCCCGTGATATTGGACACGAATCAGGGTACTCGTCGGACCACCATCGATCAGACTGCCAAAGCAATTGGCAATCTCATGTGCTTGACCTGTGGCATGAGATTCGAGAACGAGATGAAGCTCAAGGACCACCTGCTGGAGTACTCCGACATAGGGGATTACCAATGTGAAGTTTGTCATAGGAAGTTCGCGGAGGTGTACCGATTGGAGGTGCACAGAATCAAACACTCGAGATTGAACAACATCTTGAATGAGCACCACTGTCCAATATGCCACGAAGGATTCACCAGCGCTGCGAGCGTTAGAATCCATGTACTACACTTGCACGGATACGAAACGTTCCCGAGTGTCGCTACCAAGCGACCCTACACCCCACCCATCACCAAACAGTATTCTCTAATGAGTAAACGCGCCAATCAGGAGATCGGCTCACCTAAGGTCAACCAGGCGAATGCAAATGGCGAAAGGGTAAATTCTGATCTTCAGCTATCGAATACCATAGATAAACTATCAACGCGCGTTCCGTCTGTGCCAACCGATTCTACCCGGCCACCCAATGATTCCGTTTCACCTTCCCTCGGTCAAGCGCAAGTACAAGGAGCAAAATGCCCCGAGTGTGGGCTGGTATTCAATAGTCACACTACTTTAAAGAAACATATGTCGCGATTCACCAATCGCGGGGAGTACAACTGTAAGTACTGCGGTCGCAAGTTCGATAGGTACAAGACGCTGAACGCGCATGTGCTTAAACATTCTATGGACGTTCAGCTTTGTTTCTTGAAGTACGAGTGCTCGCATTGCGGCGAGAAGTTTCGAACCGCCATTTCCGTGTATTCGCACGTCGTTCATATTCACGGGAAAGATAAGCTTAAAGGCAAATGCATTGTCACGAATAGGTCGGGGACTAGTGACGATATCTTAGAATATTCGACGCTCTGCGTCAGCGGTACTCTCATGAGGCAGGTTTTTACTAACGATGATTTGGAGATCGACCACAGCCCCGCGCGCGGTACCAAAAATGTCGATGCAGTGATCAGCTCATTGAAATCGGTCAGGGTACCATCGATACCGCCAATCGAACTTTTGAATTCAGAAAAAAGTTCAACGAAGTCAGTGAATAAACCGAATTCGTTAAGCAACGAACCGACATCAGTAATCATGCCATTAGATGTGATGATGGAAGCATCGCTTCCGGAGAAGACGGTATCGTGTTCGATTCCAAAAACAAGGGATTCGGAGAACTTAGATGAGAAGTCACTTTATTATACCTGCTCTGTATGTAGCCAAAAGTATCCAACGCTGAAGAAATTCCAGTCACATTTTACGGCGTCGCATGGGAATATGATTCCTGAAACGATAACAGCTCCCCAACAAGTCCCCAACCCGAACATCGTCAACTGTATGAACTGTACTTCCACTTTCTGCAACGAATCGGAGCTGAAACAACACGTGCAAAGTTCGCACCCACTCTATCCACCCACTTATCAAGCTATGCCCCAACAGCCTCTTTCTTCGTCCATCTTAGTCGATTCTGACGTCGTAGAGATTGTTTGGGAAAAGAATGCTACAATTACTCGTTCAATAGAGAGTCTGACCTCCCAAGACTTAACCTCCCAAGACATGACATCTCAAGACTCGACTTCCCAAGACTCGGTGATTTTAATGATCCAACCGGTAATTATTTTAATGATCCAACCGGTAAGTTTGACTCCACCGACCGTGGTCACCGTAAACGAGGATGTTGGCAAGCTGAAAGTTAAATCGTTCGCGAGAATGTTTAATTGA
Protein Sequence: MARVVVYERAVDAVLTDVTFYEKLNRPLNGIKIKEEPLDPDIDGPSSVSNAAEADQRRSPPLEDQHSNSLNNKENESTSVKYHADPRTTKSNPDRKKRKRSSPRNTRGENSHPSKKHRSHMRRGLDAKDYQRKRRPPAFLYQCDVCWITFRTQRTLKRHKASLTKFDKCGSVYSSTSSLFKHKELCARSQQSNKGNRYYCNFCKRDFGGKTYLQQHLFHFHDDVILPPEIVVDKTQPNTDITQTTKSLVADVRTSTPEQTPEKLMDSPSSTSAKKMRQTTLTEFLSLFGKHNEKDQKQGCVSPRRSGVATNQGLTLRSNTNALPCDAATTAKATDSSAPAGPTANQSPTSKRPFVEIHVDTNMMMSLLNTKVKTEPEDVCVPATSHNTSYNLRRPRTDSTRSSFEQDHGSSHLKKRTRRTTQSYRRDIVSWERQMRAKFGCRECVVRIEKCCLSSTIEKTADEPETIPLQESALKAEGNSEIGRRRSVRTLFARNLEAPLIETNKDPTNTVVKPEIDPKITHESKNSDKEDEHKAFQCKVCKKSFSSKENIREHMELFHMAYISSVCSARYTSMSKLLSHYLRQHAVFRRMQCCVCYEKFEKRMQAKQHMSLHCIKVIRTKNDNLPIGSQTGCNMFKKQHECRGCSKRFWLQSCLQQHQKVCHRSKDNRKNVVSPSQKHAAGTAKSSAGHVSRDFEVPGRQLSDCSIQTRENTKIPGAVDNHDFQTNLDSRSLDSGSASTPQRKAAQSRKVVNHRRLVNGMACVKGYQTDLTGTDKERFPCSICGKQFQSFQNLCIHERTFCKPNDSLCSVCGTSFSTKRLLQQHMLATHTPTCKEGYKFFCKFCNQGFIKRANLQIHERHFHTNRSSMDPNSWSHNERTRNVNTVCTVCNLMFESYERFIEHNMYYYQGQIFTCAFCSQSFQGMYMLHHHNKLTHYPEGTRNAYTYTCDTCNEGFNQESHFHAHKLHVHFHETCPAQDSLRTIQDQTCQDHSYALTANNVTSADPTTVRVPIMAYTCEVCSLSFTNQRDLSAHETEYSDEGDFQCSKCNRRCPTATVLAKHHSLNHSGNDISHCYKCRSCGEVLTTNTAMVCHEKHFHTASNVDRKIRYNAPVILDTNQGTRRTTIDQTAKAIGNLMCLTCGMRFENEMKLKDHLLEYSDIGDYQCEVCHRKFAEVYRLEVHRIKHSRLNNILNEHHCPICHEGFTSAASVRIHVLHLHGYETFPSVATKRPYTPPITKQYSLMSKRANQEIGSPKVNQANANGERVNSDLQLSNTIDKLSTRVPSVPTDSTRPPNDSVSPSLGQAQVQGAKCPECGLVFNSHTTLKKHMSRFTNRGEYNCKYCGRKFDRYKTLNAHVLKHSMDVQLCFLKYECSHCGEKFRTAISVYSHVVHIHGKDKLKGKCIVTNRSGTSDDILEYSTLCVSGTLMRQVFTNDDLEIDHSPARGTKNVDAVISSLKSVRVPSIPPIELLNSEKSSTKSVNKPNSLSNEPTSVIMPLDVMMEASLPEKTVSCSIPKTRDSENLDEKSLYYTCSVCSQKYPTLKKFQSHFTASHGNMIPETITAPQQVPNPNIVNCMNCTSTFCNESELKQHVQSSHPLYPPTYQAMPQQPLSSSILVDSDVVEIVWEKNATITRSIESLTSQDLTSQDMTSQDSTSQDSVILMIQPVIILMIQPVSLTPPTVVTVNEDVGKLKVKSFARMFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00086602; iTF_00087411; iTF_00084766; iTF_00088287; iTF_00089056;
90% Identity: iTF_00087411;
80% Identity: -