Basic Information

Insect: Andrena trimmerana
Gene Symbol: -
Assembly: GCA_952773225.1
Location: OX731550.1:2358250-2369008[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 9.1e-05 0.0091 16.9 0.3 1 20 141 160 141 162 0.95

2 21 0.13 13 7.0 4.6 1 23 198 221 198 221 0.93

3 21 9.3e-06 0.00094 20.0 1.7 1 23 537 560 537 560 0.95

4 21 3.3 3.3e+02 2.6 0.3 5 23 567 586 566 586 0.93

5 21 0.33 33 5.7 3.1 2 23 593 614 592 614 0.96

6 21 1.2 1.2e+02 4.0 7.3 1 23 641 664 641 664 0.96

7 21 0.00081 0.082 13.9 1.3 1 22 780 801 780 801 0.96

8 21 2.2e-05 0.0022 18.9 0.6 3 23 810 831 809 831 0.95

9 21 0.0074 0.75 10.9 3.5 1 23 841 864 841 864 0.95

10 21 2 2e+02 3.3 0.1 2 19 887 904 886 907 0.88

11 21 0.017 1.7 9.8 5.1 1 23 948 971 948 971 0.94

12 21 0.00085 0.086 13.9 0.2 1 19 1017 1035 1017 1037 0.96

13 21 0.073 7.4 7.8 3.9 1 23 1045 1068 1045 1068 0.94

14 21 0.063 6.4 8.0 0.1 2 20 1139 1157 1138 1159 0.92

15 21 0.0047 0.48 11.5 1.3 1 23 1166 1188 1166 1188 0.98

16 21 0.0053 0.53 11.4 2.8 1 23 1198 1221 1198 1221 0.93

17 21 0.0003 0.031 15.3 1.2 2 21 1314 1333 1314 1334 0.94

18 21 9e-06 0.00091 20.1 2.6 1 23 1341 1363 1341 1363 0.98

19 21 0.0066 0.67 11.0 1.3 1 21 1374 1394 1374 1397 0.87

20 21 0.1 10 7.3 2.0 1 21 1534 1554 1534 1557 0.90

21 21 0.11 11 7.2 2.5 2 23 1578 1600 1577 1600 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	9.1e-05	0.0091	16.9	0.3	1	20	141	160	141	162	0.95
2	21	0.13	13	7.0	4.6	1	23	198	221	198	221	0.93
3	21	9.3e-06	0.00094	20.0	1.7	1	23	537	560	537	560	0.95
4	21	3.3	3.3e+02	2.6	0.3	5	23	567	586	566	586	0.93
5	21	0.33	33	5.7	3.1	2	23	593	614	592	614	0.96
6	21	1.2	1.2e+02	4.0	7.3	1	23	641	664	641	664	0.96
7	21	0.00081	0.082	13.9	1.3	1	22	780	801	780	801	0.96
8	21	2.2e-05	0.0022	18.9	0.6	3	23	810	831	809	831	0.95
9	21	0.0074	0.75	10.9	3.5	1	23	841	864	841	864	0.95
10	21	2	2e+02	3.3	0.1	2	19	887	904	886	907	0.88
11	21	0.017	1.7	9.8	5.1	1	23	948	971	948	971	0.94
12	21	0.00085	0.086	13.9	0.2	1	19	1017	1035	1017	1037	0.96
13	21	0.073	7.4	7.8	3.9	1	23	1045	1068	1045	1068	0.94
14	21	0.063	6.4	8.0	0.1	2	20	1139	1157	1138	1159	0.92
15	21	0.0047	0.48	11.5	1.3	1	23	1166	1188	1166	1188	0.98
16	21	0.0053	0.53	11.4	2.8	1	23	1198	1221	1198	1221	0.93
17	21	0.0003	0.031	15.3	1.2	2	21	1314	1333	1314	1334	0.94
18	21	9e-06	0.00091	20.1	2.6	1	23	1341	1363	1341	1363	0.98
19	21	0.0066	0.67	11.0	1.3	1	21	1374	1394	1374	1397	0.87
20	21	0.1	10	7.3	2.0	1	21	1534	1554	1534	1557	0.90
21	21	0.11	11	7.2	2.5	2	23	1578	1600	1577	1600	0.96

Sequence Information

Coding Sequence: ATGGCTCGTGTTCTTGTATACGAACGCGCAGTTGACGCCGTCCTCACCGATGTAACGTTCTACGAGAAATTGAACCGGCccctaaatggaataaagattaaAGAGGAACCATTGGATCCGGATATCGACGGTCCTTCGTCAGTTAGCAACGCAGCTGAAGCGGATCAACATAGATCACCACCACTCGAAGATCAACTTTCGAATAGTTTGAAcaataaagaaaatgaaagcAAACCAGTTAAGCACCATGCGGATCCAGAAACTACCAAATCGAATCTCGATAGAAAAAAGCGTAAACGCTCGTCGCCGAGGAACACGAGGAGTGAGAATTCGCATCCCACGAAAAAGCATAGATCGCACGTGCGGAGGGGGTTAGATGCTAAAGACTACCAACGGAAAAGGAGGCCACCAGCCTCCTTATACCAATGTGACGTGTGCTGGATAACCTTTCGCACACAACGAACGTTGAAACGTCACAAGGCTTTGCTCATCAAATTTGATAAATGCAGCTCAGTGTACTCTTCGAATTCCACGTTATTCAAACCCAAAGAAGTGTGTGCACGGAGTCAGCAATCGAATAAAGGAAATAGATATTATTGTAACTTCTGCAATCGAGACTTCGGGGGGAAGACATATTTGCAGCAACATCTGTTCCACTTCCACGACGATGCAATACTGCTCCCTGAAATCGTCGTTGACAAAACACAGCCCAAAACCGACATAACCCAAACCACTAAGAGTCCCGTAGCAGACGTTCGTACAACAACGCCTGAACAAACGCCAGAGAAGTTGAAGGACAGCCCAAGCAGTACATCCGTAAAGAAAATGAGGCAGCCTACCCTTACAGAGTTTCTTTCGCTGTTTGGTAAGAACAACGAGAAGGACCAGAAACAAGGGTGCGTTAGTCCTCGGCGGAGTGGTGTAGCGACTAATCAGGGCCTAACACTTCGTAGTCATACAAATACATTACCTTGCGACGCGGTAACAACAGCAAAGGCTACTGACAGTTCTGCCCCAGCTGCACCCACTGCCAATCAATCTCCCACTAGCAAAAGACCATTCGTTGAAATCCACGTGGATACAAACATGATGATGTCGTTGCTAAGCACTAAGGTAAAAACTGAACCCGAGGACGTTTGCGCCCCCGCCACGTCGTACAACACGTCTTACAATCTCAGACGGCCGAGAACTGATTCTACACGGTCATCCGTCGAGCAAGATCATGGCTCTCCTCATCTACAGAGGAGGACAAGAAAGACCAACCAAAGTTATCAGAGGGATATAGTGTCTTGGGAACGACAGATGAGGGCTAAATTCGGCTGTAGAGAATGCGTAGTTCGTATAGAGAAATGCTGTCTGTCCTCGACAATTGAAAAGAAGACCGCTGATGAGCCTGAAACTATTCCTCTGCAGGCGAGCGCGCTAAAAGCCGAAGGAAACTCTGAAATCGGTCACAGAAGGAGCGTAAGAACCTTATCCGTGAAGAACCTACAAATGCCTCTGGTTGAAACGGACAAGGACCCGACGATCACTATAGTAAAGCCTGAAATAGATCCAAAGATAACGCATGAGTCGAAGGACAGCGACAAAGAAGATGAGCACAAACCGTTTCAGTGCAAAGTCTGCAAGAAGTCATTCTCTTCGAAAGAGAACATACGTGAGCATATGGAACTGTTTCATGTGGCGTACATATCGAGCGTGTGCAGCGCGCGTTACACGTCTATGAGCAAATTACTCAGCCACTATCTACGTCAGCACGCAGTTTTTAGGCGGATGCAGTGCTGTGTGTGCTACGAAAAATTCGAGAAGCGCATGCAGGTGAAGCAACATATGTCCCTCCACTGCATCAAAGTCATACGGACCAAGAACGACAACCTGCCGACCGGTAGCCAAACAGGGTGCAACATGTTCAAGAAGCAACACGAGTGCAGAGGTTGCAGCAAGCGGTTTTGGTTGCAGTCGTGCTTGCAGCAGCATCAGAAGGTGTGCCATCTATCAAAGGATAACAGGAAGAATGTTGCTTCTCCTTCGAAGAAACACGCAGCGAGTACTGCGAAGTCCAGTGCTGGGCATGTTAGCCGCGACTTCGAAGTGTCAGGGCAACAACCGAGTGACTGTTCGATGCAGACACACGAAAATGCGAAAATACCGGGTACAGCGGATAATCACAATTTTCAAACGAACTTAGATTCAAGGAGTCCTGACAGTTGCTCAGCGTCTACACCTCAACGAAAGGCGGCTCAGTCACGAAAGGTCGCCAATCACAGGAGGCTGGTGAATGGAATGGCATGCGTGAAAGGCTACCAAACCGACCTGACAGGCACGGATAAAGAGCGATTCCCCTGCTCCATCTGCGGCAAACAGTTTCAGTCGTTTCAAAATCTATGCATACACGAGCGTACCTTCTGCAAGCCTAACGACAGCCTGTGCAGCGTCTGCGGTACATCCTTCACCACCAAGAGGCTGTTGCAGCAGCACATGCTGGCCACTCACACGCCCACGTGCAAGGAGGGCTACAAATTCTTCTGCAAGTTTTGTAACCAAGGATTTATCAAGAGGGCCAATCTTCAGATCCACGAGCGACACTTCCACACCAATCGGAGTTCCATGGACCCCAACACTTGGTCGCACAACGACCGTGCCCGGAACGTGAACACAGTGTGCACCGTGTGCAACCTGATGTTCGAGTCGTACGAGCGGTTCATCGAGCACAACATGTACTACTACCAGGGCCAGATCTTCACGTGTGCGTTTTGCAGCCAATCGTTTCAGGGCATGTACATGCTCCACCACCATAACAAGCTGACGCATTATCCGGAGGGGACGCGTAACGCGTACACCTACACATGCGACACCTGCAACGAGGGATTCAATCAGGAGTCCCATTTCCACGCGCACAAGTTGCACGTCCATTATCAGGAGACCTGCCACGCGCAGGACAGCCTGAAGACCATACAAGATCAGACCTGCCAGGACCACAGCTACGCGTTGACGGCCAATAACGTTACATCAGCCGACCCGACCACAGTCCGAGTGCCCATCATGGCGTACACTTGCGAGGTCTGCAGCCTGAGCTTTACCAACCAAAGGGACCTGTCTGCGCACGAAACGGAGTACTCCGACGAAGGAGACTTTCAGTGCAGCAAGTGCAACAGGAGGTGCCCGACAGCCACCGTTCTCGCCAAGCACCACAGCTTGAACCATAGCGGCAATGACATCAGCCATTGTTACAAATGTCGTTCCTGCGGCGAGGTACTGACCACAAACACTGCGATGGTGTGCCACGAGAAACACTTCCACACAGCGAGCAACGTTGATAGGAGAAGCAGGCACAATGCGCCCATCCTATTGGACGCGAATCAGGGTACTCGTCGGACCACCATCGACCAGACTGCCAACGCAATTGGCAATCTCATGTGTCTGACCTGTGGCACGAGATTCGAGAACGAAATGAAGCTCAAGGATCACCTGCTGGAGTACTCCGACATAGGGGATTACCAATGTGAAGTCTGTCATAGGAAGTTTGCGGAGGTGTACCGATTGGAGGTGCACAGAATCAAACACTCGAGATTGAACAACATCTTGAATGAGCACCACTGCCCGATATGCCACGAGGGATTCACCAGCGCTGCGAACGTTCGAATCCATGTACTACACTTGCACGGATACGAAACGTTCCCGAGTGTCGCTGCCAAGCGACCCTACACCCCACCCATCACCAGGCAGTATTCTCCAATGAGTAAACGTGTCAATCAGGAGATCGACTCACCTAAGGTCAACCAGGCGAATGCAAATGGCGAAAGGGTAAATGCTGATCTTCAGTTATCGAATACCGTAGACAAACTAACAACGCGCGTTCTGCCTGTGCCAACCGATTCTACCAGGCCACCCAATGATTCCGTTTCACCTTCCCCCGATCAAGCGCAAGCACAAGGAGCAAAATGCCCCGAGTGTGGTCTGGTATTCAATAGTCACACTACTTTAAAGAAACATAGGTCGCGATTCACCAATCGCGGGGAGTACAAGTGTAAGTACTGCGGTCGCAAGTTCGATAGGTACAAGACGCTGAACGCGCATGTGCTTAAACATTCTATGGACGTTCAGCTTTGTTTCTTGAAGTACGAGTGCTCGCATTGCGGCGAGAAGTTTCGAACCGCCATTTCCGTGTATTCGCACGTCGTTCATATTCACGGGAAAGATAAGCTTAAAGAGAAATGCATTGTCACGAATAGGTCGGAGACTAGTGATGATATCTTGGAATATTCAACGCTCTCCGTGAGCGGTACTCTCATGAGGCAGGTTTTTACTAACGATGATTTAGAGATCGATCACAGCCCCGCGCGCGGTACCAAGAATGTCGATGCAGTGATCAactcattgaaatcggtcaggGTATCATCGATACCGCCAATCGAAGTTTTCAATTCGGAAAAAAGTTCAACGAAGTCAGTGAATAAACCGAATTCGTTAAGCAATGAATCGACATCAGTAATCGAGTCATTAAATGTGATAATGGAAACATCGCTTCCGGAGAAGACGGTATCGTATTCGATTCTAAAAACAATGGATTCGGAGAACTTAGATGAGAAGTCACTTTATTATACTTGCTCCATATGTAGCCAAAAGTATCCAACGCTGAAGAAATTCCAGTCGCATTTTACGGCGTCGCACGGGAATATGATTCCTGAAACAATTACAGCTCCACGACAAGTCCCCACTCCGAACATCGTCAAATGTATGAACTGTACTTCTACTTTTTGCAACGAATTGAAGCTGAAAGAACACATGCAAAGTGCGCACCCACTCTATCCGCCCACTTCTCAAGCTATGCCCCAACAGCCTCCTTCCTCGCCCATCTTAGTCGATTCTGACATCGTAGAGATTCTTTGGGAAAAGAATGCTACAATTACTCGTTCAATAGAGAGTCTGACCTCCCAAGACTTGACATCCCAAGACTCGACTTCCCAAGACTCAGTTATTTTAATGATCCAACCGGTAAGTTTGACTCCCCCGACCGTGGTAACCGTAAACGAGGATGTTGGCAAGCTGAAAGTTAAATCGTTCGCGAGAATGTTTAATTGA
Protein Sequence: MARVLVYERAVDAVLTDVTFYEKLNRPLNGIKIKEEPLDPDIDGPSSVSNAAEADQHRSPPLEDQLSNSLNNKENESKPVKHHADPETTKSNLDRKKRKRSSPRNTRSENSHPTKKHRSHVRRGLDAKDYQRKRRPPASLYQCDVCWITFRTQRTLKRHKALLIKFDKCSSVYSSNSTLFKPKEVCARSQQSNKGNRYYCNFCNRDFGGKTYLQQHLFHFHDDAILLPEIVVDKTQPKTDITQTTKSPVADVRTTTPEQTPEKLKDSPSSTSVKKMRQPTLTEFLSLFGKNNEKDQKQGCVSPRRSGVATNQGLTLRSHTNTLPCDAVTTAKATDSSAPAAPTANQSPTSKRPFVEIHVDTNMMMSLLSTKVKTEPEDVCAPATSYNTSYNLRRPRTDSTRSSVEQDHGSPHLQRRTRKTNQSYQRDIVSWERQMRAKFGCRECVVRIEKCCLSSTIEKKTADEPETIPLQASALKAEGNSEIGHRRSVRTLSVKNLQMPLVETDKDPTITIVKPEIDPKITHESKDSDKEDEHKPFQCKVCKKSFSSKENIREHMELFHVAYISSVCSARYTSMSKLLSHYLRQHAVFRRMQCCVCYEKFEKRMQVKQHMSLHCIKVIRTKNDNLPTGSQTGCNMFKKQHECRGCSKRFWLQSCLQQHQKVCHLSKDNRKNVASPSKKHAASTAKSSAGHVSRDFEVSGQQPSDCSMQTHENAKIPGTADNHNFQTNLDSRSPDSCSASTPQRKAAQSRKVANHRRLVNGMACVKGYQTDLTGTDKERFPCSICGKQFQSFQNLCIHERTFCKPNDSLCSVCGTSFTTKRLLQQHMLATHTPTCKEGYKFFCKFCNQGFIKRANLQIHERHFHTNRSSMDPNTWSHNDRARNVNTVCTVCNLMFESYERFIEHNMYYYQGQIFTCAFCSQSFQGMYMLHHHNKLTHYPEGTRNAYTYTCDTCNEGFNQESHFHAHKLHVHYQETCHAQDSLKTIQDQTCQDHSYALTANNVTSADPTTVRVPIMAYTCEVCSLSFTNQRDLSAHETEYSDEGDFQCSKCNRRCPTATVLAKHHSLNHSGNDISHCYKCRSCGEVLTTNTAMVCHEKHFHTASNVDRRSRHNAPILLDANQGTRRTTIDQTANAIGNLMCLTCGTRFENEMKLKDHLLEYSDIGDYQCEVCHRKFAEVYRLEVHRIKHSRLNNILNEHHCPICHEGFTSAANVRIHVLHLHGYETFPSVAAKRPYTPPITRQYSPMSKRVNQEIDSPKVNQANANGERVNADLQLSNTVDKLTTRVLPVPTDSTRPPNDSVSPSPDQAQAQGAKCPECGLVFNSHTTLKKHRSRFTNRGEYKCKYCGRKFDRYKTLNAHVLKHSMDVQLCFLKYECSHCGEKFRTAISVYSHVVHIHGKDKLKEKCIVTNRSETSDDILEYSTLSVSGTLMRQVFTNDDLEIDHSPARGTKNVDAVINSLKSVRVSSIPPIEVFNSEKSSTKSVNKPNSLSNESTSVIESLNVIMETSLPEKTVSYSILKTMDSENLDEKSLYYTCSICSQKYPTLKKFQSHFTASHGNMIPETITAPRQVPTPNIVKCMNCTSTFCNELKLKEHMQSAHPLYPPTSQAMPQQPPSSPILVDSDIVEILWEKNATITRSIESLTSQDLTSQDSTSQDSVILMIQPVSLTPPTVVTVNEDVGKLKVKSFARMFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00085646;
90% Identity: iTF_00087411;
80% Identity: -