Basic Information

Insect: Andrena bicolor
Gene Symbol: -
Assembly: GCA_960531205.1
Location: OY482665.1:19820926-19830824[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00015 0.013 16.2 0.3 1 20 130 149 130 151 0.95

2 21 0.27 23 6.0 5.0 1 23 187 210 187 210 0.93

3 21 9.4e-06 0.00079 20.0 1.7 1 23 517 540 517 540 0.95

4 21 5.4 4.5e+02 1.9 0.3 5 23 547 566 546 566 0.93

5 21 0.33 28 5.7 3.1 2 23 573 594 572 594 0.96

6 21 1.4 1.2e+02 3.8 6.7 1 23 621 644 621 644 0.96

7 21 0.00081 0.068 13.9 1.3 1 22 760 781 760 781 0.96

8 21 2.1e-05 0.0018 18.9 0.5 3 23 790 811 789 811 0.95

9 21 0.015 1.2 10.0 3.0 1 23 821 844 821 844 0.95

10 21 2 1.7e+02 3.3 0.1 2 19 867 884 866 887 0.88

11 21 0.017 1.4 9.8 5.1 1 23 928 951 928 951 0.94

12 21 0.0029 0.24 12.2 0.5 1 19 997 1015 997 1017 0.96

13 21 0.073 6.2 7.8 3.9 1 23 1025 1048 1025 1048 0.94

14 21 0.024 2 9.3 0.2 2 20 1119 1137 1118 1139 0.92

15 21 0.0094 0.79 10.6 1.4 1 23 1146 1168 1146 1168 0.97

16 21 0.0049 0.41 11.5 3.7 1 23 1178 1201 1178 1201 0.93

17 21 0.00012 0.01 16.6 0.1 2 20 1294 1312 1293 1314 0.95

18 21 1.1e-05 0.00095 19.8 1.3 1 23 1321 1343 1321 1343 0.98

19 21 0.0027 0.23 12.3 1.3 1 23 1354 1377 1354 1377 0.91

20 21 0.19 16 6.5 2.0 1 21 1514 1534 1514 1537 0.90

21 21 0.0053 0.44 11.4 2.1 3 23 1559 1580 1557 1580 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00015	0.013	16.2	0.3	1	20	130	149	130	151	0.95
2	21	0.27	23	6.0	5.0	1	23	187	210	187	210	0.93
3	21	9.4e-06	0.00079	20.0	1.7	1	23	517	540	517	540	0.95
4	21	5.4	4.5e+02	1.9	0.3	5	23	547	566	546	566	0.93
5	21	0.33	28	5.7	3.1	2	23	573	594	572	594	0.96
6	21	1.4	1.2e+02	3.8	6.7	1	23	621	644	621	644	0.96
7	21	0.00081	0.068	13.9	1.3	1	22	760	781	760	781	0.96
8	21	2.1e-05	0.0018	18.9	0.5	3	23	790	811	789	811	0.95
9	21	0.015	1.2	10.0	3.0	1	23	821	844	821	844	0.95
10	21	2	1.7e+02	3.3	0.1	2	19	867	884	866	887	0.88
11	21	0.017	1.4	9.8	5.1	1	23	928	951	928	951	0.94
12	21	0.0029	0.24	12.2	0.5	1	19	997	1015	997	1017	0.96
13	21	0.073	6.2	7.8	3.9	1	23	1025	1048	1025	1048	0.94
14	21	0.024	2	9.3	0.2	2	20	1119	1137	1118	1139	0.92
15	21	0.0094	0.79	10.6	1.4	1	23	1146	1168	1146	1168	0.97
16	21	0.0049	0.41	11.5	3.7	1	23	1178	1201	1178	1201	0.93
17	21	0.00012	0.01	16.6	0.1	2	20	1294	1312	1293	1314	0.95
18	21	1.1e-05	0.00095	19.8	1.3	1	23	1321	1343	1321	1343	0.98
19	21	0.0027	0.23	12.3	1.3	1	23	1354	1377	1354	1377	0.91
20	21	0.19	16	6.5	2.0	1	21	1514	1534	1514	1537	0.90
21	21	0.0053	0.44	11.4	2.1	3	23	1559	1580	1557	1580	0.95

Sequence Information

Coding Sequence: ATGGCTCGTGTTGTTGTATACGAACGCGCAGTTGACGCCGTCCTCACCGATGTGACGTTCTACGAGAAATTGAACCGGCCCctaaatggaataaagattaAAGAAGAACCATTGGATCCGGACATTGACGGTCCTTCGTCCTCACCACCACTCGAAGATGAAGTTTCGAATAGTTTGAAcaataaagagaatgaaagcATACCAGTCAAGCACCATGCGGATCCAGAAAGTACTAAATCGAATCACGATAGAAAAAAGCGTAAACGCTTGTCGCCGAGGAACACGAAGGGTGAGAATTCGCATCCCACGAAGAAGCATAGATCGCACATGCGGAGGGGGTTGGATGCTAAAGACTACCAACGGAAAAGGAGACCACCAGCCTTCGTATACCAATGTGACGTGTGCTGGGTAACTTTTCGCACACAAAGAACGTTGAAACGTCACAAGGCCTTGCTCACCAAATTTGATAAATGCGGCTCAGTGCACTCTTCGACTTCGTCGTCATTCAAACACAAAGAATTGAGTACACGGAGTCAGCAATCGAATAAAGGATTTAGATATTATTGTAACTTCTGCAAACGAGACTTCGGGGGGAAGACATATCTGCAGCAACATCTGTTTCACTTCCACGACGATGCAATACTGGCCCCTGAAATCGTCGTTGACAAAACAGAGCCCAACACGGACATAACCCAAATCACTAAGAATCCCGTAGCAGACGTTCGTACAACAACGCCTGAACAAACGCCAGAGAAGTTGACGGACAGCCCAACCAGTACATCCGTGAAGAAAATGAGGCAAACTACCCTTACAGAGTTTCTTTCGCTGTTTGGTAAGCACAATGAGAAGGACCAGAAACAAGGATGCGTTAGTCTTCGGCGGAGTGGTGTAGCGATTAATCAGGGTCTAACACTTCGTAGTCATACAAATGCCTTACCTTGCGACGCGGCAACAACAGCAAGGGCTACCGAAAGTTCTGCCCCAGCGGCGCCCACTGCCAATCAATCTCCCACCAGCAAAAGACCATTCGTTGAAATCCACGTGGATACGAATATGATGATGTCGTTGCTAACCACTAAGGTAAAAACTGAACCCGAGGACGTTTGCGCCCCCGCCACGTCGCACAACACGTCTTACAATCTCAGACGGCCGAGAAATGATTCTACACGGTCATCCTTCGAGCAAGACCATGGCTCTTCTCATCTACAGAGGAGGACAAGGAGAACCACCCAAAGTTATCAGAGGCATATAGAGTCTTGGGAACAACAGATGAGGACTAAGTTCGGCTGTAGAGAATGCGTAGTTCGTATAGAGAAATGCTGTCTGTCCTCGACAATTGAGAAGAAGACCGTTGATGAGTCTGAAACTATTCCTCTGCGGGAGGAAATCAGTCGCAGGAGGAGCGTAAGAACCTTATCCGTGAGGAACCTAGAAACGCCTCTGGTTGAAACGAACAAGGACCCGACGATCACTGTAGTGAAGCCAGAAATAGATCCAAAGATAACGCACGAGTCGAAGGACAGCGACAAAGTAGATGAGCACAAACCGTTTCAGTGCAAAGTCTGCAAGAAGTCGTTCTCTTCGAAAGAGAACATACGTGAGCATATGGAACTGTTTCACGTGGCGTACATATCGAGCGTCTGCAGCGCGCGTTACACGTCTATGAGCAAATTACTCATGCACTATCTACGTCAGCATGCGGTTTTTAGGCGGATGCAGTGCTGCGTGTGCTACGAAAAATTCGAGAAGCGTATGCAGGTGAAGCAACATATGTCCCTCCACTGCATCAAAGTCATACGGACCAAGAACGACAACCTTCCGATCGGTGGCCAAACAGGGTGCAACATGTTCAAGAAGCAACACGAGTGCAGAGGTTGCAGCAAGCGGTTTTGGTTGCAGTCGTGCTTGCAGGAACATCAGAAGGTGTGCCATCGATCGAAGGACAACATGAAGAATGTTGCTTCTACTTCGAAGGAACACGCAGCGGGTACTGCGAAGTCCACTGCTGGGCATGTTAGCTGCGACTTCGAGGTGCCAGGGCGACAACCGAGTGACTGTTCGATGCAGACACGGGAAAATACGAAAATACCGGGTGCAGCGGATAATCAGGACCTTCAAACGAACTTAGATTCAAGGAGTCTGGACAGTTGCACAGCGTCTACACCTCATCGGAAGATGGCACAGTCACGAAAGGTTGTCAATCACAGAAGGCTGGTAAATGGAGTGGCGTGCGTGAAAGGCTACCAAACCGACATGACAGGCACGGATAAAGAGAGATTCCCCTGCTCCATCTGCGGCAAACAGTTTCAATCGTTTCAAAACCTGTGCATACATGAGCGCACCTTCTGCAAGCCCAATGACAGCCTCTGCAGCGTCTGCGGTACATCGTTCTCCACCAAGAGGCTGTTGCAGCAGCACATGCTGGCCACTCACACACCCACGTGCAAAGAAGGCTACAAATTTTTCTGCAAGTTTTGTAACCAAGGATTCATCAAGAGGGCTGATCTTCAGATCCACGAGCGACACTTCCACACCAATCGAAGCTCCATGGACCCCAACCCTTGGTCGCACAACGAACATGCCCGCAACGTGAATACAGTGTGCACCGTGTGCAACCTGATGTTCGAGTCGTACGAGCGGTTCATCGAGCACAACATGTACTACTACCAGGGCCAGATCTTCACGTGTGCCTTTTGCAGCCAATCGTTTCAGGGCATGTACATGCTCCACCACCACAACAAGCTGACGCATTATCCGGAAGGGACACGTAACGCGTATACCTACACCTGTGACACTTGCAACGAGGGATTCAATCAGGAGTCCCATTTCCACGCGCACAAGTTGCACGTCCATTTTCACGAGACCTGTCACGCGCAGGACAGCCTCAGGACCATACAAGATCAGACCTGCCAGGACCATAGCTACGCGTTGACGGCCAATAACGTTACATCAGCCGACCCGACCACAGTGCGGGTGCCCATCATGGCGTACACTTGCGAGGTCTGTAGCCTGAGCTTTACCAACCACAGGGACCTATCCGCGCACGAAACGGAGTACTCCGACGAAGGAGACTTTCAGTGCAGCAAGTGCAACAGGAGGTGCCCGACAGCCACCGTTCTCGCCAAGCATCACAGCTTGAACCATAGCGGCAATGACATCAGCCACTGTTACAAATGTCGTTCCTGCGGCGAGGTGCTGACTACAAACACTGCGATGGTGTGCCACGAAAAACACTTCCACACAGCGAGCAACGTTGATCGCAGAAGCAGGCACAATGCACCCGTCCTATTGGACGCGAATCAGGGTACTCGTCGGACCACCATCGATCAGACTGCCAACACAATTGGCAATCTCATGTGTCTGACCTGTGGCATGAGATTCAAGAACGAAATGAAGCTCAAGGATCACCTACTGGAGTACTCGGACATAGGGGATTACCAATGCGAAGTCTGTCATAGGAAGTTCGCGGAGGTGTACCGACTGGAAGTGCACAAAATCAAACACTCGAGACTGAACAACATCTTGAATGAGCACCACTGCCCGATATGCCACGAGGGATTCACTACCGCTGCAAACGTTCGCACCCATGTACTACACTTGCACGGATACGAAACGTTCCCGAGTGTCGCTACCAAGCGACCCTACACCCCACCCATCACCAGGCAGTATTCTCCAATGAGTAAACGCGTCAATCAGGAGATCGGCTCACCTAAGGTCAACCAGGCGAATGCAAATGGCGAAAGGGTAAATGCTGATCTTCAGTCATCGAATACCATAGACAAACTATCAACGCGCATTCCGTTTGTGCCAACCGATCTTACCAAGCCACCCAATGATTCCATTTCACCTTCCCTCGATCAAGCGCCAGTACAAGGATCAAAATGCCCTGTGTGTGGGTTGGTATTCAATAATCTCACTACTTTAATGAAACATATGTCGGGATTCGCCAATCGCGGGGAGTACAGCTGTAAGTACTGCGGTCGCAAGTTCGATAGGTACAAGGCACTGAACGCGCATGTACTTAAACATTCTATGGACGTTCAGCTTTGTTTCTTGAAGTACGAGTGTTCGCATTGCGGCGAAAAGTTTCGAACCGCCATTTCCGTGTATTCGCACATCGTTCATATTCACGGGAAAGATAAGCTTAAAGACGAATGCATTGTCACGAATAGGTCGGGGACTAGTGACGATATCTTGGAATATTCGACGCTCTGCGTGAGCGGTGCCCTCATGAAGCAGGTTTTTACTAACGATGATTTGGAGATCGACCACAGCTCCGCGCGTGATACCAAGAATGTCGATGCAGTGATCagttcattgaaatcggtcaggGTAGCATCGATACCGCCAATCGAACTTTTAAATTCGGAAAAAAGTTCAACGAAGTCGGTGAATAAACCGAATTCGTTAAGCAATGAACCGACATCAGTAACCGTGCCACTAAATGTGATAATGGAAGCATCGCTTCCGGGGAAGACTGTATCGTATTCGATTCTAAAAACAAGGGATTCGGAGAACTTAGATGAGAAGTCACTTTATTATACCTGCTCCGTATGTAGCCAAAAGTATCCAACGCTAAAGAAATTCCAGTCGCACTTTACGGCGTCGCACGGGAATATGATTCCTGAAACGATAACAGCTCCCCGACAAGTCCCCAACTCGAACATCATCAACTGTATGAACTGTTCTTCCACTTTTTGCAACGAATCGGAGCTGAAAGAACACATGCAAAGTTCGCACCCACTCTATCCGCCTACTTGTCAAGCTATGCCCCAACAGCCTCCTTCCTTGTCCACCTCAGTCGATTCTGACATCGTAGAGATTGTTTGGGAAAAGAATGCTATAATTACTCGTTCAATAGAGAGTCTGACCTCCCAAGACTTGACCTCCCAAGACTCGACTTCCCAAGACTCAGTTATTTTAATGATCCAACCGGTAAGTTTCACTCCCCCGACCGTGGTCACCGTAAACGAGGATGTTGGCAAGCTAAAAGTTAAATCGTTCGCGAGAATGTGTAATTGA
Protein Sequence: MARVVVYERAVDAVLTDVTFYEKLNRPLNGIKIKEEPLDPDIDGPSSSPPLEDEVSNSLNNKENESIPVKHHADPESTKSNHDRKKRKRLSPRNTKGENSHPTKKHRSHMRRGLDAKDYQRKRRPPAFVYQCDVCWVTFRTQRTLKRHKALLTKFDKCGSVHSSTSSSFKHKELSTRSQQSNKGFRYYCNFCKRDFGGKTYLQQHLFHFHDDAILAPEIVVDKTEPNTDITQITKNPVADVRTTTPEQTPEKLTDSPTSTSVKKMRQTTLTEFLSLFGKHNEKDQKQGCVSLRRSGVAINQGLTLRSHTNALPCDAATTARATESSAPAAPTANQSPTSKRPFVEIHVDTNMMMSLLTTKVKTEPEDVCAPATSHNTSYNLRRPRNDSTRSSFEQDHGSSHLQRRTRRTTQSYQRHIESWEQQMRTKFGCRECVVRIEKCCLSSTIEKKTVDESETIPLREEISRRRSVRTLSVRNLETPLVETNKDPTITVVKPEIDPKITHESKDSDKVDEHKPFQCKVCKKSFSSKENIREHMELFHVAYISSVCSARYTSMSKLLMHYLRQHAVFRRMQCCVCYEKFEKRMQVKQHMSLHCIKVIRTKNDNLPIGGQTGCNMFKKQHECRGCSKRFWLQSCLQEHQKVCHRSKDNMKNVASTSKEHAAGTAKSTAGHVSCDFEVPGRQPSDCSMQTRENTKIPGAADNQDLQTNLDSRSLDSCTASTPHRKMAQSRKVVNHRRLVNGVACVKGYQTDMTGTDKERFPCSICGKQFQSFQNLCIHERTFCKPNDSLCSVCGTSFSTKRLLQQHMLATHTPTCKEGYKFFCKFCNQGFIKRADLQIHERHFHTNRSSMDPNPWSHNEHARNVNTVCTVCNLMFESYERFIEHNMYYYQGQIFTCAFCSQSFQGMYMLHHHNKLTHYPEGTRNAYTYTCDTCNEGFNQESHFHAHKLHVHFHETCHAQDSLRTIQDQTCQDHSYALTANNVTSADPTTVRVPIMAYTCEVCSLSFTNHRDLSAHETEYSDEGDFQCSKCNRRCPTATVLAKHHSLNHSGNDISHCYKCRSCGEVLTTNTAMVCHEKHFHTASNVDRRSRHNAPVLLDANQGTRRTTIDQTANTIGNLMCLTCGMRFKNEMKLKDHLLEYSDIGDYQCEVCHRKFAEVYRLEVHKIKHSRLNNILNEHHCPICHEGFTTAANVRTHVLHLHGYETFPSVATKRPYTPPITRQYSPMSKRVNQEIGSPKVNQANANGERVNADLQSSNTIDKLSTRIPFVPTDLTKPPNDSISPSLDQAPVQGSKCPVCGLVFNNLTTLMKHMSGFANRGEYSCKYCGRKFDRYKALNAHVLKHSMDVQLCFLKYECSHCGEKFRTAISVYSHIVHIHGKDKLKDECIVTNRSGTSDDILEYSTLCVSGALMKQVFTNDDLEIDHSSARDTKNVDAVISSLKSVRVASIPPIELLNSEKSSTKSVNKPNSLSNEPTSVTVPLNVIMEASLPGKTVSYSILKTRDSENLDEKSLYYTCSVCSQKYPTLKKFQSHFTASHGNMIPETITAPRQVPNSNIINCMNCSSTFCNESELKEHMQSSHPLYPPTCQAMPQQPPSLSTSVDSDIVEIVWEKNAIITRSIESLTSQDLTSQDSTSQDSVILMIQPVSFTPPTVVTVNEDVGKLKVKSFARMCN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00085646;
90% Identity: iTF_00087411;
80% Identity: -