Basic Information

Insect: Andrena camellia
Gene Symbol: -
Assembly: GCA_029448645.1
Location: CM055676.1:70718708-70723370[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.069 6.6 7.9 2.5 1 23 395 417 395 417 0.97

2 18 0.00097 0.092 13.7 0.9 2 23 452 473 451 473 0.98

3 18 0.00027 0.026 15.4 1.2 1 23 630 652 630 652 0.97

4 18 0.0016 0.15 13.0 0.2 2 23 656 677 655 677 0.96

5 18 0.0046 0.44 11.6 3.6 1 23 748 770 748 770 0.97

6 18 0.00048 0.046 14.7 0.7 1 21 776 796 776 800 0.92

7 18 0.022 2.1 9.4 3.2 2 23 879 901 878 901 0.93

8 18 0.0004 0.038 14.9 4.4 1 23 958 980 958 980 0.96

9 18 0.00036 0.034 15.1 0.7 1 20 985 1004 985 1006 0.94

10 18 0.053 5.1 8.2 0.5 2 23 1017 1038 1017 1038 0.97

11 18 3.6e-05 0.0035 18.2 0.6 2 23 1077 1098 1076 1098 0.97

12 18 3.3e-05 0.0032 18.3 1.6 1 23 1103 1125 1103 1125 0.95

13 18 0.00025 0.024 15.5 2.6 1 23 1131 1153 1131 1153 0.98

14 18 5.8e-06 0.00056 20.7 0.4 1 23 1169 1191 1169 1191 0.95

15 18 4.7e-07 4.5e-05 24.1 0.6 1 23 1197 1219 1197 1219 0.99

16 18 5.2e-05 0.0049 17.7 0.2 1 23 1225 1247 1225 1247 0.97

17 18 0.00019 0.018 15.9 4.1 1 23 1253 1275 1253 1275 0.96

18 18 0.013 1.3 10.1 0.4 1 20 1281 1300 1281 1302 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.069	6.6	7.9	2.5	1	23	395	417	395	417	0.97
2	18	0.00097	0.092	13.7	0.9	2	23	452	473	451	473	0.98
3	18	0.00027	0.026	15.4	1.2	1	23	630	652	630	652	0.97
4	18	0.0016	0.15	13.0	0.2	2	23	656	677	655	677	0.96
5	18	0.0046	0.44	11.6	3.6	1	23	748	770	748	770	0.97
6	18	0.00048	0.046	14.7	0.7	1	21	776	796	776	800	0.92
7	18	0.022	2.1	9.4	3.2	2	23	879	901	878	901	0.93
8	18	0.0004	0.038	14.9	4.4	1	23	958	980	958	980	0.96
9	18	0.00036	0.034	15.1	0.7	1	20	985	1004	985	1006	0.94
10	18	0.053	5.1	8.2	0.5	2	23	1017	1038	1017	1038	0.97
11	18	3.6e-05	0.0035	18.2	0.6	2	23	1077	1098	1076	1098	0.97
12	18	3.3e-05	0.0032	18.3	1.6	1	23	1103	1125	1103	1125	0.95
13	18	0.00025	0.024	15.5	2.6	1	23	1131	1153	1131	1153	0.98
14	18	5.8e-06	0.00056	20.7	0.4	1	23	1169	1191	1169	1191	0.95
15	18	4.7e-07	4.5e-05	24.1	0.6	1	23	1197	1219	1197	1219	0.99
16	18	5.2e-05	0.0049	17.7	0.2	1	23	1225	1247	1225	1247	0.97
17	18	0.00019	0.018	15.9	4.1	1	23	1253	1275	1253	1275	0.96
18	18	0.013	1.3	10.1	0.4	1	20	1281	1300	1281	1302	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTCGAAATAAATACGTCCGATTCACCGCAAAACGAAGAAGGCATCGTGCCTACGGTGGAAATATGCCGTGTTTGCCTTCTCGATAATCTAGTGATGCGAGAGCTCTTTCTAGAGAACGAGGTTGCTTCCCTTTCAGCAAAGGCCATGAGTTTTGCCAATGTTAAGATGTTACCTGGAGATGGTCTACCAACGCATGTATGCTGCATATGCGCGGACAAACTGGAATCTGCGTACGAGTTTAAACTGCAAGTGGAGCAGGCAGATACTGTCCTCAGAGAAAGATTTGTTACCATGAGCATGAAGGAAGAACTATTCTTCAATGAGGTTGAAGTACATCTCGAGGCAGACGAGCCAAACGAGAATATGGGTGAGATGCAGATGGAAAATCAGTACGCAGCTACCACAGAAGCCCTCGAGTCGATATCTCGAGAAGAAAAACCATCTCTTTTGAAGGATGAATTAGCGTTATTGCAGGTGGAAAAGTTGGTGGAACAAGAACAAACTATGAGAGAGCAGGACAATAGTCCGATGTTGGAAGAAGCGATTGACAGAGCACTGACCGTGGGGCAGGTACCGGAAGACTGTCTCCACCAGAGGGAAGAAAACGTTAAAGTTATTACTGACACGCTCAAGGACGAAGTGGCGTTGAAGCACGAAAGCCGCGACGATAACTGCATCGATAGTATTCCAACAGTGGAGCATGATTACATATTGCAGCAGGAATGCATATTGACAAGTGGGAGCCAACAGCAACAGCATCAGCTTACTTCGGAAGAATCCTTCTCACGCGAAGATTGCGTGGAATATGTAAATTTGTTAGTGAAAGCAGCCGATGTGACGAACCGGGAAAACGAAGATGAGAACGATGATGAAAATATCATCAACGAAAACCAAAACGAAAATGAAGACGGAAACGAAAATGAAGACGGAAACGAAAATGAAGACGGAAACGAAAATGAAAACGATGCAGAAGGATCGGATGTTATGAAAACGGACGTCAAGATGGAATTGGATTCTCAGTCTTCGAATGAAACGCGAAGAAGCAAACGTAAGCTGGCTCGACGAAATCCTGAAATGAAGCCAGACTctgacgaagagaattattttgaGAATTTAAATCTAAGCTCGCGGCTGAGGAGGACTCAAACCTCTGATAAATCGGAGAAGATCTTCTTCATGTGCTACCTCTGCGATAAGGAGTTTTTGTCGAAAAACGTCTTGAAGGAGCATATGCATTCTCACGAAGAAGTAAGAAAAGcgttatctttaaaaaaaacaattgagaAACCGCAAAAGAGTGTCTGCAATATCGCGAAATTGCCACCGTCCGGCAAAAGATCGAACAAATGCCCGTATTGCGGCAaacaatacatatatataatctCATTTAGCAAGCATCTAAAGAAACATGAACGGGAGAAAGAAGAGCCGAAGGAGGAACTGATGCCGTTAGAAATTTCATTTCACGAAGACGATCATAGTTTGGATCTCGACGATTATGAAGCTAAGCGCCACTTTGACTCGGTGTATCGTAAAAGAGCTAGGAGAAAAGAAGCTATCGATAATGCAAGGATGGATCAAGAAGAGCTGTCTGACgtcgaggaggaagaggaattgGAGGCGGCGGAGAAGGAGGAGGTACAgtcggaggaggaggaagaggaggaggaaaagGAAGATGAGAACGAAGCAGCGGAAGGGGAGGAAGAGGTGGATCAGGTAGAGCCGGAGCAGGAGCAGGGACAGGGGCAAGAGCAGGAAATTTTGCATGAGATGAAGGAATATGAAGAAAAGGAGGGAGAAGCGGGAAGAGAAGATGAACGAGAGGATAAGCATAAGATAAACGAAGAACAAGTACGCGGATGTCGCACAGGAACATTCGTGTGCGATAAGTGTTCGGAAAGGTTTTATACGAAACGTGGTTTACGAAAACACGCGATTTCGCACACCACCCTTAAATGCAGCATATGCGAAGAGGAGTTCGACTCACTGGAGGGACTGAGGAATCATCGGGCGAAGCATGTGGTGGAAGGTGTATTGACCGAACAAGACCTGGAGACAGATACAGAACCCTCGGCGAAGAAGGGGACGACGGATGATTATGAAATTAAAGCTAGGGAAAAGGTAGAAAGGGGTGAAGAGGAGGCGAGGGAAGAGGCAGAGCTGTCGGGGAGAGAGAAAGTGGTAAAGAAGAACGTCAGACACGCGGTGAGCACGCATTCCGGGATGGACTACAATTGCAAGATGTGTTGTCAGCAATTTGCCAGAAAGGATCTGTTACAGAGGCATATGGAACAACACGAGCGTGTTAAATCCTATAAATGTACACAATGCAATAAATCGTTCGGTAACGAACTTACTTTACGAAATCATCTTATAGCTACTAATCACAAAACATTCATTCACGGGCAAGAGTACGATCCTAACAAACGTATGAAGCGAGTCGCTGCGAAAGCAGCGCAAAAGATTATCGACAAGATTAAAACAGAATACGGCTTAGAAGATTATGATGAGGAAGATGAGAAGGAGGATAAGATTGATCGTACAAATGCTGCCGATGGAAATTACGGCCGGGGTAAACGAGAGATTTCGTCGCAGAGGAAGCAGAATTGCAAGAAGGATCTGGAATGCCTGAGTTGCAACAGAAAGTGTAGTTCGAGACAATCGCTAATGAAGCACATGGAGCAGCAACACGTGACCGACGAGAAGATGGTGAAGCAAGCAGACAAGCAAAGACAAGCGGCGGAGAAGAAGGAGCGGCAGAGGGGCTGCGCGAACGAACGAATGGATAATGATGGGAACAAAGACGACGACGATTACGATTCGGATTTTGAGAGCGGTTTGGATTGGCCAATGGACAATCACGAGTGTGTAAAGTGCAAGAAAAGGTATAGTACGAAAAAGTCGTTGTTACGGCATCAGTTGTTGCACGAAGAACCAAACTTCGAGTGCGACATTTGCAATGTCAAGTTCTATCGCAAAGACAAGCTGAAAGCACACTACGACAAGTGCTCGGAGAAGAATCCCGACCAAGTGAGGAAGTGCAACATCTGTGGGGATAGCTTTGAAAATAACGAGATCTTGCGCGAGCATAGGTCGAAGCATGTGACCGAAGGTATCCTCACGGAGGAAGATCTGAGAGATATCGAGCCGCGACCGGAGGAGAAAAAACCGGGGGAGAAAATCGGCCGAAAAAGGAGGACCGATATCGTAGGTTTAGAATGTACGGAGTGTAATAAGCAGTACACGTCGAGAAAGGGGCTTCTGCGTCATATTCAAGTTCACGAAGGCAAAAAGTACCTTTGTGACATATGCCCGAAGAAATTCTACAGGAGGGAGCATTTGAAGATACACGTGGCAAAGCATAATATGATCAAACCATATAAATGTACACGCTGCACGAAGCGTTTCATAAAAGAGGAACAGCTGATGAATCATTTGTCGAAACACGACCGAACGTTTAAGAAGAGCAAAGAAACGGACAGCTCGAAGAGATTCCTATGCGAGATCTGTTCCAAGAGTTTTACCCAATCGACAACATTGATCGCGCATCTTAGAGCTCACAATGGCATCAAACCGTACGTTTGCGAAGTCTGCTCTCGGCCTTTTACAACGAACGCTTACCTAAAGATGCACATGAGGACACACACTCAAGAACGACCATACATTTGTCAGTATTGTTCGCGGGCGTTCGCTAGAGCCGACACGCTTGCTAATCACTTGACCTCGCACACCGGTGAAGCCAAGTATCACTGCAAGTACTGCCCAAAGAACTTCCGCCGCCTCAAATCTCTCAAAGAGCACGTTTTCATCCACACTGGCCAGAGACCATACGCTTGTCCAACCTGTGATCGACGCTTCAACAATAATGGAAGTCGATATGCTCATAGCAAAAGGTGTAAACAGAATTTTGTTCAGAATCAGAATCGCGGCCAAGCGTTAACGCAAGTGCAGCAACTGCCTCAGAGTCAACAGCAGAGGGTATTGCAGCAGGCCGCTCTTGGACAAGGGCAAGTGGTTAAAGCGCAGAATATTAAAACTATCACTATCACTAGGCAAGTCGAACCGACCATTACCACCCAACAAGTTACGCAACATCAGGAGATACTGATGCCCTTGATCTTTCCCCTTACCGTTACTGTTGCTGATATCAGCGAAGAAGTTATATTACCGGAGGGAGCTAAGCTATTCACAACATCCTAA
Protein Sequence: MDAVEINTSDSPQNEEGIVPTVEICRVCLLDNLVMRELFLENEVASLSAKAMSFANVKMLPGDGLPTHVCCICADKLESAYEFKLQVEQADTVLRERFVTMSMKEELFFNEVEVHLEADEPNENMGEMQMENQYAATTEALESISREEKPSLLKDELALLQVEKLVEQEQTMREQDNSPMLEEAIDRALTVGQVPEDCLHQREENVKVITDTLKDEVALKHESRDDNCIDSIPTVEHDYILQQECILTSGSQQQQHQLTSEESFSREDCVEYVNLLVKAADVTNRENEDENDDENIINENQNENEDGNENEDGNENEDGNENENDAEGSDVMKTDVKMELDSQSSNETRRSKRKLARRNPEMKPDSDEENYFENLNLSSRLRRTQTSDKSEKIFFMCYLCDKEFLSKNVLKEHMHSHEEVRKALSLKKTIEKPQKSVCNIAKLPPSGKRSNKCPYCGKQYIYIISFSKHLKKHEREKEEPKEELMPLEISFHEDDHSLDLDDYEAKRHFDSVYRKRARRKEAIDNARMDQEELSDVEEEEELEAAEKEEVQSEEEEEEEEKEDENEAAEGEEEVDQVEPEQEQGQGQEQEILHEMKEYEEKEGEAGREDEREDKHKINEEQVRGCRTGTFVCDKCSERFYTKRGLRKHAISHTTLKCSICEEEFDSLEGLRNHRAKHVVEGVLTEQDLETDTEPSAKKGTTDDYEIKAREKVERGEEEAREEAELSGREKVVKKNVRHAVSTHSGMDYNCKMCCQQFARKDLLQRHMEQHERVKSYKCTQCNKSFGNELTLRNHLIATNHKTFIHGQEYDPNKRMKRVAAKAAQKIIDKIKTEYGLEDYDEEDEKEDKIDRTNAADGNYGRGKREISSQRKQNCKKDLECLSCNRKCSSRQSLMKHMEQQHVTDEKMVKQADKQRQAAEKKERQRGCANERMDNDGNKDDDDYDSDFESGLDWPMDNHECVKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRPEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLMNHLSKHDRTFKKSKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFVQNQNRGQALTQVQQLPQSQQQRVLQQAALGQGQVVKAQNIKTITITRQVEPTITTQQVTQHQEILMPLIFPLTVTVADISEEVILPEGAKLFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00087365;
90% Identity: iTF_00087365; iTF_00088237; iTF_00084727; iTF_00089006; iTF_00086560;
80% Identity: -