Basic Information

Insect: Andrena bicolor
Gene Symbol: -
Assembly: GCA_960531205.1
Location: OY482665.1:27817852-27822455[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.068 5.7 7.9 2.5 1 23 376 398 376 398 0.97

2 18 0.00095 0.08 13.7 0.9 2 23 433 454 432 454 0.98

3 18 0.00027 0.022 15.5 1.2 1 23 610 632 610 632 0.97

4 18 0.0016 0.13 13.0 0.2 2 23 636 657 635 657 0.96

5 18 0.0045 0.38 11.6 3.6 1 23 728 750 728 750 0.97

6 18 0.00047 0.039 14.7 0.7 1 21 756 776 756 780 0.92

7 18 0.021 1.8 9.5 3.2 2 23 859 881 858 881 0.93

8 18 0.00039 0.033 14.9 4.4 1 23 938 960 938 960 0.96

9 18 0.00035 0.029 15.1 0.7 1 20 965 984 965 986 0.94

10 18 0.052 4.4 8.2 0.5 2 23 997 1018 997 1018 0.97

11 18 3.6e-05 0.003 18.2 0.6 2 23 1057 1078 1056 1078 0.97

12 18 3.2e-05 0.0027 18.3 1.6 1 23 1083 1105 1083 1105 0.95

13 18 0.00025 0.021 15.6 2.6 1 23 1111 1133 1111 1133 0.98

14 18 5.7e-06 0.00048 20.7 0.4 1 23 1149 1171 1149 1171 0.95

15 18 4.7e-07 3.9e-05 24.1 0.6 1 23 1177 1199 1177 1199 0.99

16 18 5.1e-05 0.0043 17.7 0.2 1 23 1205 1227 1205 1227 0.97

17 18 0.00019 0.016 15.9 4.1 1 23 1233 1255 1233 1255 0.96

18 18 0.013 1.1 10.1 0.4 1 20 1261 1280 1261 1282 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.068	5.7	7.9	2.5	1	23	376	398	376	398	0.97
2	18	0.00095	0.08	13.7	0.9	2	23	433	454	432	454	0.98
3	18	0.00027	0.022	15.5	1.2	1	23	610	632	610	632	0.97
4	18	0.0016	0.13	13.0	0.2	2	23	636	657	635	657	0.96
5	18	0.0045	0.38	11.6	3.6	1	23	728	750	728	750	0.97
6	18	0.00047	0.039	14.7	0.7	1	21	756	776	756	780	0.92
7	18	0.021	1.8	9.5	3.2	2	23	859	881	858	881	0.93
8	18	0.00039	0.033	14.9	4.4	1	23	938	960	938	960	0.96
9	18	0.00035	0.029	15.1	0.7	1	20	965	984	965	986	0.94
10	18	0.052	4.4	8.2	0.5	2	23	997	1018	997	1018	0.97
11	18	3.6e-05	0.003	18.2	0.6	2	23	1057	1078	1056	1078	0.97
12	18	3.2e-05	0.0027	18.3	1.6	1	23	1083	1105	1083	1105	0.95
13	18	0.00025	0.021	15.6	2.6	1	23	1111	1133	1111	1133	0.98
14	18	5.7e-06	0.00048	20.7	0.4	1	23	1149	1171	1149	1171	0.95
15	18	4.7e-07	3.9e-05	24.1	0.6	1	23	1177	1199	1177	1199	0.99
16	18	5.1e-05	0.0043	17.7	0.2	1	23	1205	1227	1205	1227	0.97
17	18	0.00019	0.016	15.9	4.1	1	23	1233	1255	1233	1255	0.96
18	18	0.013	1.1	10.1	0.4	1	20	1261	1280	1261	1282	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTCGAAATAAATACGTCCGATTCACCGCAAAACGAAGAAGGCATCGTGCCTACGGTGGAAATATGCCgtgtttgccttctggataatCTAGTGATGCGAGAACTCTTTCTAGAGAACGAGGTTGCTTCTCTTTCAGCAAAGGCCATGAGTTTTGCCAATGTTAAGATGTTACCTGGAGATGGTTTACCAACGCGCGTATGCTGCATATGCGCGGACAAACTAGAATCTGCGTACGAGTTTAAACTCCAAGTGGAGCAGGCAGATACCGTCCTCAGAGAAAGATTTGTTACCATGAGCATGAAGGAAGAGCTATTCTTCAATGAGGTTGAAGTACATCTTGAGGCAGACGAACCAAACGAGGGTATGGGCGAGATGCAAATGGAAAGTCAGTACGCAGCTACCACGGAAGCCCTCGAGTCGATATCTCGAGAAGAGAAACCATCTCTTTTGAAGGATGAATTAGCGTTATTGCAGGTGGAAAAGTTGGTGGAGCAAGAACAAACTATGAGAGAGCAGGACAATAGTCCGATGTTGGAAGAAGCGATTGACAGAGCGATGACCACAGTGCAGGTACCGGAAGAATGCCTAGACCAGAGGGAAGAAAACGTTAAAGTTATTACTGACACGCTCAAGGACGAAGTGGCATTAAAGCACGAAAGCCGCGAAGATAACTGCATCGATAGTATTCCAACAGTGGAGCATGATTACATATTGCAGCAGGAATGCATATTGGCAAGCGGGAgccaacaacaacagcaacaacatcAGCTTACTTCGGAAGAATATGTAAATTTGTTATTGAAAGCAACCGATGTGACGAATCGAGAAAACGAAGATGAAAACGATGATGAAAATACCATCAACGAAAACCAAAACGAAAATGAAGACGAAAACGAGAATGAAAACGAAGCGGAAGGATCGGATGTTATGAAAACGGACGTCAAGATGGAATTGGATTCTCAGTCTTCGAATGAAACGCGAAGAAGCAAACGTAAGCTGGTTCGACGAAATCCTGAAATGAAGCCAGACTCTGACGAAGAGAATTATTTTGAGAATTTAAATCTAAGCTCGCGGCTGAAGAGGACTCAAACCTCCGATAAATCGGAGAAGATCTTTTTCATGTGCTACCTCTGCGACAAGGAGTTTTTATCGAAAAACGTCTTGAAGGAGCATATGCATTCTCACGAAGAAGTAAGGAAAGCgttatctttaaaaaaaacaattgaGAAACCGCAAAAGAGCGTCTGCAATATCGCGAAATTGCCACCGTCTGGTAAAAGATCGAACAAATGTCCGTATTGCGGCAAACAATACATATACATAATCTCATTTAGCAAGCATCTAAAGAAACATGAGCGAGAGAAAGAAGAGCCGAAGGAGGAACTAATGCCGTTAGAAATTTCATTTCACGAAGACGATCATAGTTTGGATCTCGACGATTATGAAGCTAAGCGCCACTTTGACTCGGTGTATCGTAAAAGGGCTAGGAGAAAAGAAGCTGCCGATAATGCAAGAATGGATCAAGAAGAGCTGTCTGACGTTGAGGGGGAAGAGGAAGTGGAGGCGGCGGAGAAGGAGGAGTTGCAgccggaggaggaggaagaggaggaggagggacaTGAGAACGAAGCAGcggaaggagaggaagaggtaGATCAGGTAGAGCCGGAGCAGGAGCAGGGACAGGGGCAAGAGCAGGAAATTTTGCATGAGATGAAGGGATACGAAGAAAAGGAAGGAGAAGCGGGAAGAGAAGATGAACGAGAGGATAAGCATAAGATAAACGAAGAACAAGTACGCGGATGTCGCACGGGAACATTCGTGTGCGATAAATGTTCGGAAAGGTTTTATACGAAACGCGGTTTACGAAAACACGCGATTTCGCACGCCACCCTTAAATGCAGCATTTGCGAAGAAGAGTTCGACTCACTGGAGGGACTGAGGAATCATCGGGCGAAGCATGTGGTGGAAGGTGTATTGACCGAACAAGACCTGGAGACAGATGCAGAACGCTCGGTGAAGAAGGGGACGACGGATGATTATGAAACTAAACCTAGGGAAAAGGTAGAAAAGGGCGAAGAGGAAGCGAGGGAAGAGGCAGAGCTGTCGGGGAGAGAGAAAGTGGTAAAGAAGAACGTCAGACACGCGGTGAGCACGCATTCCGGGATGGACTACAATTGCAAGATGTGTTGCCAGCAATTTGCCAGAAAGGATCTGTTACAGAGGCACATGGAACAACACGAGCGTGTTAAATCCTATAAATGTACACAATGCAATAAATCGTTCGGCAACGAACTTACTTTACGAAATCATCTTATAGCTACTAATCACAAAACTTTCATTCACGGGCAAGAGTACGATCCTAACAAACGTATGAAGCGAGTCGCTGCGAAAGCAGCGCAAAAGATCATCGACAAGATCAAAACGGAATACGGTTTAGAAGATTACGATGAGGAAGATGAGAAGGAGGATAAGATTGATCGTACAAATGCTGCGGATGGAAATTACGGCCGGGGTAGACGAGAGATTTCATCGCAGAGGAAGCAGAATTGCAAGAAGGATCTGGAATGCCTGAGTTGCAATAGGAAGTGTAGTTCGAGACAATCGCTAATGAAGCACATGGAGCAGCAACACGTGACCGACGAAAAGATGGTGAAGCAAGCGGACAAGCAAAGACAAGCGGCGGAGAAGAAGGAGCGGCAAAGGGGCTGCGCGAACGAACGAATGGATAATGATGGTATCAAAGACGACGACGATTACGATTCAGATTTTGAGAGCGGTTTGGATTGGCCAATGGACAATCACGAGTGTGTAAAGTGCAAGAAACGGTATAGTACGAAAAAGTCGTTGTTGCGGCATCAATTGTTGCACGAAGAACCAAACTTCGAGTGCGACATTTGCAACGTCAAGTTCTATCGTAAGGACAAGCTGAAAGCACACTACGACAAGTGCTCGGAGAAAAATCCCGACCAAGTGAGGAAGTGCAACATCTGCGGGGATAGCTTTGAAAATAACGAGATCTTGCGGGAGCATAGGTCGAAGCATGTGACCGAAGGTATCCTCACGGAAGAAGATCTGAGAGATATCGAGCCGCGACCCGAGGAGAAAAAACCGGGGGAGAAAATCGGCAGAAAAAGGAGAACCGACATCGTAGGTTTAGAATGCACGGAGTGTAATAAGCAGTACACGTCGAGAAAAGGGCTTCTGCGTCATATTCAAGTTCACGAAGGCAAAAAGTACCTTTGCGATATATGCCCGAAGAAATTCTACAGGAGGGAGCATCTGAAGATACACGTGGCAAAGCATAATATGATCAAACCATATAAATGTACACGGTGCACGAAGCGTTTCATAAAAGAGGAACAGCTGATGAATCATTTGTCGAAACACGACCGAACGTTTAAGAAGAACAAAGAAACGGACAGCTCGAAGAGATTCCTTTGCGAGATTTGTTCCAAGAGTTTTACCCAATCGACAACATTGATTGCGCATCTTAGAGCTCACAATGGTATCAAACCGTACGTTTGCGAAGTCTGCTCCCGGCCTTTTACAACGAACGCTTACCTAAAGATGCACATGAGGACACACACACAAGAACGACCATACATCTGTCAGTATTGTTCGCGTGCGTTCGCCAGAGCCGACACGCTTGCTAATCACTTGACCTCGCACACCGGCGAAGCCAAGTATCACTGCAAGTACTGCCCAAAGAACTTCCGCCGCCTCAAATCTCTCAAAGAGCACGTTTTCATCCACACTGGCCAGAGACCGTACGCTTGTCCAACCTGTGATCGACGCTTCAACAATAATGGAAGCCGGTATGCTCATAGTAAAAGGTGTAAACAGAATTTCGTTCAGAATCAGAATCGCGGCCAAGCGTTGACGCAAGTGCAGCAACTGCCTCAAAGTCAACAGCAGAGGGTATTGCAGCAGGCAGCTCTTGGACAAGGGCAAGTGGTTAAAGCGCAGAATATTAAAACTATCACTATCACTAGGCAAGCCGAACCGACCATTACCACCCAACAAGTTACGCAACATCAGGAGATACTGATGCCCTTGATCTTTCCTCTTACCGTTACTGTGGCTGATATCAGCGAAGAAGTTATATTACCGGAGGGAGCTAAGCTATTCACAACATCCTAA
Protein Sequence: MDAVEINTSDSPQNEEGIVPTVEICRVCLLDNLVMRELFLENEVASLSAKAMSFANVKMLPGDGLPTRVCCICADKLESAYEFKLQVEQADTVLRERFVTMSMKEELFFNEVEVHLEADEPNEGMGEMQMESQYAATTEALESISREEKPSLLKDELALLQVEKLVEQEQTMREQDNSPMLEEAIDRAMTTVQVPEECLDQREENVKVITDTLKDEVALKHESREDNCIDSIPTVEHDYILQQECILASGSQQQQQQHQLTSEEYVNLLLKATDVTNRENEDENDDENTINENQNENEDENENENEAEGSDVMKTDVKMELDSQSSNETRRSKRKLVRRNPEMKPDSDEENYFENLNLSSRLKRTQTSDKSEKIFFMCYLCDKEFLSKNVLKEHMHSHEEVRKALSLKKTIEKPQKSVCNIAKLPPSGKRSNKCPYCGKQYIYIISFSKHLKKHEREKEEPKEELMPLEISFHEDDHSLDLDDYEAKRHFDSVYRKRARRKEAADNARMDQEELSDVEGEEEVEAAEKEELQPEEEEEEEEGHENEAAEGEEEVDQVEPEQEQGQGQEQEILHEMKGYEEKEGEAGREDEREDKHKINEEQVRGCRTGTFVCDKCSERFYTKRGLRKHAISHATLKCSICEEEFDSLEGLRNHRAKHVVEGVLTEQDLETDAERSVKKGTTDDYETKPREKVEKGEEEAREEAELSGREKVVKKNVRHAVSTHSGMDYNCKMCCQQFARKDLLQRHMEQHERVKSYKCTQCNKSFGNELTLRNHLIATNHKTFIHGQEYDPNKRMKRVAAKAAQKIIDKIKTEYGLEDYDEEDEKEDKIDRTNAADGNYGRGRREISSQRKQNCKKDLECLSCNRKCSSRQSLMKHMEQQHVTDEKMVKQADKQRQAAEKKERQRGCANERMDNDGIKDDDDYDSDFESGLDWPMDNHECVKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRPEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLMNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFVQNQNRGQALTQVQQLPQSQQQRVLQQAALGQGQVVKAQNIKTITITRQAEPTITTQQVTQHQEILMPLIFPLTVTVADISEEVILPEGAKLFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00087365;
90% Identity: iTF_00085607;
80% Identity: -