Basic Information

Insect: Andrena camellia
Gene Symbol: -
Assembly: GCA_029448645.1
Location: CM055680.1:9426037-9431018[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 1.1e-05 0.001 19.8 0.9 2 23 66 87 66 87 0.97

2 29 0.0008 0.077 14.0 1.5 1 23 89 112 89 112 0.93

3 29 0.00069 0.066 14.2 0.5 1 23 117 140 117 140 0.97

4 29 0.00019 0.018 15.9 2.0 1 23 146 169 146 169 0.96

5 29 0.072 6.9 7.8 0.4 3 23 177 198 175 198 0.95

6 29 0.0015 0.14 13.1 1.0 1 23 203 225 203 225 0.96

7 29 5.3e-07 5e-05 24.0 0.1 2 23 232 253 231 253 0.97

8 29 1.1e-06 0.00011 23.0 0.2 1 23 259 281 259 281 0.98

9 29 0.0018 0.17 12.9 0.4 1 23 287 309 287 309 0.97

10 29 0.2 19 6.4 7.6 1 23 396 419 396 419 0.96

11 29 1.5e-06 0.00014 22.5 0.4 1 23 425 447 425 447 0.98

12 29 2.9e-05 0.0028 18.5 1.5 1 23 453 475 453 475 0.98

13 29 0.00013 0.012 16.4 0.1 1 23 481 503 481 503 0.98

14 29 1.2e-05 0.0012 19.6 5.3 1 23 509 532 509 532 0.98

15 29 0.0088 0.85 10.7 0.2 1 23 548 571 548 571 0.97

16 29 0.03 2.9 9.0 0.7 3 23 581 601 579 601 0.95

17 29 8.1e-06 0.00078 20.2 0.4 2 23 608 629 607 629 0.98

18 29 3.5e-05 0.0034 18.2 0.6 3 23 637 657 635 657 0.97

19 29 3.1e-06 0.0003 21.5 0.5 1 23 663 685 663 685 0.99

20 29 0.32 31 5.8 0.5 3 23 726 747 725 747 0.96

21 29 6.9e-06 0.00066 20.5 1.0 1 23 753 776 753 776 0.98

22 29 0.11 11 7.2 0.7 2 23 782 803 781 804 0.94

23 29 2.3e-05 0.0022 18.8 0.5 1 23 809 831 809 831 0.98

24 29 0.017 1.7 9.8 0.5 2 23 838 860 837 860 0.94

25 29 0.00012 0.011 16.6 2.5 1 23 881 904 881 904 0.93

26 29 0.0043 0.41 11.6 0.1 1 23 915 937 915 937 0.95

27 29 0.017 1.6 9.8 3.6 1 23 943 965 943 965 0.94

28 29 1e-06 9.9e-05 23.1 1.1 1 23 971 993 971 993 0.98

29 29 3.6e-05 0.0034 18.2 0.1 1 21 999 1019 999 1020 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	1.1e-05	0.001	19.8	0.9	2	23	66	87	66	87	0.97
2	29	0.0008	0.077	14.0	1.5	1	23	89	112	89	112	0.93
3	29	0.00069	0.066	14.2	0.5	1	23	117	140	117	140	0.97
4	29	0.00019	0.018	15.9	2.0	1	23	146	169	146	169	0.96
5	29	0.072	6.9	7.8	0.4	3	23	177	198	175	198	0.95
6	29	0.0015	0.14	13.1	1.0	1	23	203	225	203	225	0.96
7	29	5.3e-07	5e-05	24.0	0.1	2	23	232	253	231	253	0.97
8	29	1.1e-06	0.00011	23.0	0.2	1	23	259	281	259	281	0.98
9	29	0.0018	0.17	12.9	0.4	1	23	287	309	287	309	0.97
10	29	0.2	19	6.4	7.6	1	23	396	419	396	419	0.96
11	29	1.5e-06	0.00014	22.5	0.4	1	23	425	447	425	447	0.98
12	29	2.9e-05	0.0028	18.5	1.5	1	23	453	475	453	475	0.98
13	29	0.00013	0.012	16.4	0.1	1	23	481	503	481	503	0.98
14	29	1.2e-05	0.0012	19.6	5.3	1	23	509	532	509	532	0.98
15	29	0.0088	0.85	10.7	0.2	1	23	548	571	548	571	0.97
16	29	0.03	2.9	9.0	0.7	3	23	581	601	579	601	0.95
17	29	8.1e-06	0.00078	20.2	0.4	2	23	608	629	607	629	0.98
18	29	3.5e-05	0.0034	18.2	0.6	3	23	637	657	635	657	0.97
19	29	3.1e-06	0.0003	21.5	0.5	1	23	663	685	663	685	0.99
20	29	0.32	31	5.8	0.5	3	23	726	747	725	747	0.96
21	29	6.9e-06	0.00066	20.5	1.0	1	23	753	776	753	776	0.98
22	29	0.11	11	7.2	0.7	2	23	782	803	781	804	0.94
23	29	2.3e-05	0.0022	18.8	0.5	1	23	809	831	809	831	0.98
24	29	0.017	1.7	9.8	0.5	2	23	838	860	837	860	0.94
25	29	0.00012	0.011	16.6	2.5	1	23	881	904	881	904	0.93
26	29	0.0043	0.41	11.6	0.1	1	23	915	937	915	937	0.95
27	29	0.017	1.6	9.8	3.6	1	23	943	965	943	965	0.94
28	29	1e-06	9.9e-05	23.1	1.1	1	23	971	993	971	993	0.98
29	29	3.6e-05	0.0034	18.2	0.1	1	21	999	1019	999	1020	0.96

Sequence Information

Coding Sequence: ATGATAATCTGTTTTAGTTCCCCACCGTTGGATCCTCTGCGCGACACGACCGCCACCGAAAAGCCATGGAAGATCAGAATACCTCCCTATCCCCCGGCGAAGGAGAGGAGATTGCCAAACAGCCGAGTGAAAGGTGCACCGACGAGAAAGAATGATAAAGACGCGAAACCAAAGAACAAAATTGACCGCCGCCCGGAGTGCGACTATTGTGGCAAAAAGTTCTATGGGAAGTCGTTCCTAGTGTCGCACATGAGGCAACACAAACACCCCTGCGAGACCTGCGGGCAGACCTTCAAGCTGAGAAAAGACTTGAAGCTCCACTACGAGCAGATCCACGGGCCGCTGCTTTACCCTTGCGACATCTGCGAGTATAAGAGCAAGAACAAGTGGACGTTGAAGGATCACATCATCAGGAGGCACACCGGCAGCTACGTGTACACCTGCAAGATCTGCGAGAAGCAGTTCAAGATCAAGAACGACCTGAGGCAGCACACCAACCAGATGCACAACAACCAGCCGCCCATCATCTGCACCGTCTGCGGCCATCCAAACAAGAGCCTTCCGGCGTTGAAGTCGCACATGAGGTACAGGCACTTCAGGCCGGAGCACGAGTGCAGCATATGCAAGCGCCGATTGATGACGCAGGACAGCCTCGAGCAGCATTTGCTCTGGCACGAAAGGCAGGAGAAGGTGGTCTGTCCCACCTGCGGCAAGATCTTCAGCCAGAGGAGAGACCTGAACCTCCATATCAGGATCCACGAAGGTATCAAGCCATTCACCTGTCCCATCTGTGGCAAATCATTCTCGAGGAGGACTGCCCAAGAACAGCACATACTGATACACACTGGCATGAGGCCTTACGCCTGCGATATCTGCGGGCAAGCTTTCGCACAGAAACCTGGACTGATTTGCCATAGAAAGCGACACCCTGGACCTCTGCCACCGCTGCCCGTCATCTCCATTAAGAAGCTGATCAACGAATTCACCGAAGGCTTGGCGGACGCGTCCATGGAAAAGGACGAGTCTGCCAGCGAGTCGGGGGAGAAGGATGAATCTGTGCAGGCATCGAAGGAAAGGGATGAGTCTGTGCAGGGATCGAAGGAGAAGGACGAAGCTGTCCAAGCTTCCAAAGAGGACGAAGTGAAGGAAGAACTGGAGTCGCGAAGGGCGAACTCGCGAGCGGTGCACGAGTGCGTGAAATGCGGGGCCTGCTTCTGTCACACGAGGAAGCTGGTGGAGCATCTGAAGAATCTACACGACATCGACAGAGCCTTCAGTTGCGACGAGTGCGGCAAGACCTTTCGAAGCCCCATGAACATAGCCCGCCACAAACGCATTCACACGGACTTGAAGAGATTCTCCTGCGACCTGTGCGACTATCGGTCCAACCAGAAGTCGAACCTCGAGATCCATCGCCGACGGCACACCAAGGACTACGCGTTCAGGTGCGAGGAATGCCAGAAAGGCTTCGTCTCGAGGGCGGAGTACCTGGTGCACGTGAATGTCCACACGAGGAAGCATATCTATCGGTGCGAGCACTGCGACAAGTCCTACCCTTACAAGAAGAACCTCACCACCCACCGGAAACGCCAGCACCCGAGCACTCTGCCCGCGGACCAGGCGATGAACGTGAAGCTCAAGTACGCGTGCAAGGTGTGCCTGGAAGGTTTCGCGCAGAAGCTGCTCTTGGATAGGCATCTGATGAAGCAGCACGGGCTGCACGACAAGGTGAAGCATCTGTGCGACCTGTGCGGCGCGGTGTTGTCTTCTAAGCGGCGATTGATGGAGCACAGGCGGGGCCACGTGTACGAGAAGACCGTCAAGTGCGAATTGTGCGACAAGATGTTCGCCAGCAAAGAGTACCTCAGCGTTCATCGGCGCATACACACGGGCGAAAAGCCGTACGGTTGCTCGCAGTGCGACAGGAGGTTCACGCAGAGGACCGCCTTGATTTTGCACATTCGGTACCATACAGGGGAGAGGCCGTATCAATGCGCCGACTGTGGCAAGGGCTTCATATCTGGCAGCTTCCTTCAGAAACATCGCAGGATGCACGAGAAAGCTTCGCTGTGGGACAATGGTCACGAGGAGCTTGCCAGCTGCGACGATTTCAAGATCAAGAGCGAGGATATTCTTCTACAGGCTGGGCAGAAATTCGAGGGCAACGAGAAGGCCTGCGACCTCTGCCAAGAAAAGTTCCATTTCGTGACCAGATTAGTGGCACATTTGAGGATCGTTCATGGTATTCACAGACCCTTCAAGTGTGACACCTGCGGCAAGACGTATCCACAGCAGTTTATGCTGAACGCCCACGTGAAGAAGTCCCACACGCCGAAGACGATCCCTTGCAGCCAGTGTAACTTCATGGGGGTGAATGCGACCGATGTGGAGAGGCATACCAAGCGACACCATCGCGAGGAGAAGTTCACCTGTGAGATCTGCAGCGAGAGCTTTGAGGACAAAGACTCGCTGATGACGCACACGACTATGCACAACTTCATGCAGTATCAACAGTGCAACGCCTGCGGTAGCACCTTCAACGATGTGTACAGTTTGAAGGAGCACAATCGCTTGTACCACTACGACCCCGCGGCACTGATGCAAGAGAAGCTCGAGGAAGGGGACCAGCAGTCTTCGGAGCACAAGTGCAACGTTTGTGGCAAAGTTTACAAGTACAAGTCCGTGTTGAAGCAGCACAAAGTAAAGGCCCACGGCGACACCCCGAACTACGAGAGGCGCAGATACCTGTGCGCCCTTTGCGGCAAGGAGCTGAAGACAGCAAAGGGGTTGGAGATCCACAATCGTTCTCACACTGGCGAGAAACCGTACACCTGCGAGGTCTGCGGCAAGTGTTTCGCCTGCGAGACCCTGCTCAGGACTCACAACGTCACTCACACTGGAGAGCGAAAGTATTCGTGCGACCAGTGCGGCAAAGCCTTCACCCAGAGGTCCACCCTGGTGGTGCACAAACGCTATCACACGGGTGAAAGGCCGTACGTATGTCCCCGTTGCGGAAAGGGCTTCGTAACGAGGACCGTTTTGAACACCCACATGAAATCCTGTCGCTGA
Protein Sequence: MIICFSSPPLDPLRDTTATEKPWKIRIPPYPPAKERRLPNSRVKGAPTRKNDKDAKPKNKIDRRPECDYCGKKFYGKSFLVSHMRQHKHPCETCGQTFKLRKDLKLHYEQIHGPLLYPCDICEYKSKNKWTLKDHIIRRHTGSYVYTCKICEKQFKIKNDLRQHTNQMHNNQPPIICTVCGHPNKSLPALKSHMRYRHFRPEHECSICKRRLMTQDSLEQHLLWHERQEKVVCPTCGKIFSQRRDLNLHIRIHEGIKPFTCPICGKSFSRRTAQEQHILIHTGMRPYACDICGQAFAQKPGLICHRKRHPGPLPPLPVISIKKLINEFTEGLADASMEKDESASESGEKDESVQASKERDESVQGSKEKDEAVQASKEDEVKEELESRRANSRAVHECVKCGACFCHTRKLVEHLKNLHDIDRAFSCDECGKTFRSPMNIARHKRIHTDLKRFSCDLCDYRSNQKSNLEIHRRRHTKDYAFRCEECQKGFVSRAEYLVHVNVHTRKHIYRCEHCDKSYPYKKNLTTHRKRQHPSTLPADQAMNVKLKYACKVCLEGFAQKLLLDRHLMKQHGLHDKVKHLCDLCGAVLSSKRRLMEHRRGHVYEKTVKCELCDKMFASKEYLSVHRRIHTGEKPYGCSQCDRRFTQRTALILHIRYHTGERPYQCADCGKGFISGSFLQKHRRMHEKASLWDNGHEELASCDDFKIKSEDILLQAGQKFEGNEKACDLCQEKFHFVTRLVAHLRIVHGIHRPFKCDTCGKTYPQQFMLNAHVKKSHTPKTIPCSQCNFMGVNATDVERHTKRHHREEKFTCEICSESFEDKDSLMTHTTMHNFMQYQQCNACGSTFNDVYSLKEHNRLYHYDPAALMQEKLEEGDQQSSEHKCNVCGKVYKYKSVLKQHKVKAHGDTPNYERRRYLCALCGKELKTAKGLEIHNRSHTGEKPYTCEVCGKCFACETLLRTHNVTHTGERKYSCDQCGKAFTQRSTLVVHKRYHTGERPYVCPRCGKGFVTRTVLNTHMKSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00087358;
90% Identity: iTF_00087358; iTF_00086551; iTF_00088229; iTF_00088999; iTF_00084720;
80% Identity: -