Basic Information

Insect: Andrena trimmerana
Gene Symbol: -
Assembly: GCA_952773225.1
Location: OX731548.1:9492755-9497728[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 1.1e-05 0.0011 19.8 0.9 2 23 66 87 66 87 0.97

2 29 0.00079 0.08 13.9 1.5 1 23 89 112 89 112 0.93

3 29 0.00068 0.069 14.2 0.5 1 23 117 140 117 140 0.97

4 29 0.00019 0.019 15.9 2.0 1 23 146 169 146 169 0.96

5 29 0.071 7.2 7.8 0.4 3 23 177 198 175 198 0.95

6 29 0.0015 0.15 13.1 1.0 1 23 203 225 203 225 0.96

7 29 5.2e-07 5.3e-05 24.0 0.1 2 23 232 253 231 253 0.97

8 29 1.1e-06 0.00011 22.9 0.2 1 23 259 281 259 281 0.98

9 29 0.0018 0.18 12.9 0.4 1 23 287 309 287 309 0.97

10 29 0.2 20 6.4 7.6 1 23 395 418 395 418 0.96

11 29 1.5e-06 0.00015 22.5 0.4 1 23 424 446 424 446 0.98

12 29 2.9e-05 0.0029 18.5 1.5 1 23 452 474 452 474 0.98

13 29 0.00014 0.014 16.4 0.1 1 23 480 502 480 502 0.98

14 29 1.2e-05 0.0013 19.6 5.3 1 23 508 531 508 531 0.98

15 29 0.012 1.2 10.3 0.2 1 23 547 570 547 570 0.97

16 29 0.03 3 9.0 0.7 3 23 580 600 578 600 0.95

17 29 8e-06 0.00081 20.2 0.4 2 23 607 628 606 628 0.98

18 29 3.5e-05 0.0035 18.2 0.6 3 23 636 656 634 656 0.97

19 29 3.9e-06 0.0004 21.2 0.3 1 23 662 684 662 684 0.99

20 29 0.32 32 5.8 0.5 3 23 731 752 730 752 0.96

21 29 7.2e-06 0.00073 20.4 1.1 1 23 758 781 758 781 0.98

22 29 0.077 7.8 7.7 0.7 2 23 787 808 786 809 0.94

23 29 2.2e-05 0.0023 18.8 0.5 1 23 814 836 814 836 0.98

24 29 0.015 1.5 9.9 0.6 2 23 843 865 842 865 0.94

25 29 0.00012 0.012 16.6 2.5 1 23 886 909 886 909 0.93

26 29 0.0043 0.43 11.6 0.1 1 23 920 942 920 942 0.95

27 29 0.017 1.7 9.8 3.6 1 23 948 970 948 970 0.94

28 29 1e-06 0.0001 23.0 1.1 1 23 976 998 976 998 0.98

29 29 3.5e-05 0.0036 18.2 0.1 1 21 1004 1024 1004 1025 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	1.1e-05	0.0011	19.8	0.9	2	23	66	87	66	87	0.97
2	29	0.00079	0.08	13.9	1.5	1	23	89	112	89	112	0.93
3	29	0.00068	0.069	14.2	0.5	1	23	117	140	117	140	0.97
4	29	0.00019	0.019	15.9	2.0	1	23	146	169	146	169	0.96
5	29	0.071	7.2	7.8	0.4	3	23	177	198	175	198	0.95
6	29	0.0015	0.15	13.1	1.0	1	23	203	225	203	225	0.96
7	29	5.2e-07	5.3e-05	24.0	0.1	2	23	232	253	231	253	0.97
8	29	1.1e-06	0.00011	22.9	0.2	1	23	259	281	259	281	0.98
9	29	0.0018	0.18	12.9	0.4	1	23	287	309	287	309	0.97
10	29	0.2	20	6.4	7.6	1	23	395	418	395	418	0.96
11	29	1.5e-06	0.00015	22.5	0.4	1	23	424	446	424	446	0.98
12	29	2.9e-05	0.0029	18.5	1.5	1	23	452	474	452	474	0.98
13	29	0.00014	0.014	16.4	0.1	1	23	480	502	480	502	0.98
14	29	1.2e-05	0.0013	19.6	5.3	1	23	508	531	508	531	0.98
15	29	0.012	1.2	10.3	0.2	1	23	547	570	547	570	0.97
16	29	0.03	3	9.0	0.7	3	23	580	600	578	600	0.95
17	29	8e-06	0.00081	20.2	0.4	2	23	607	628	606	628	0.98
18	29	3.5e-05	0.0035	18.2	0.6	3	23	636	656	634	656	0.97
19	29	3.9e-06	0.0004	21.2	0.3	1	23	662	684	662	684	0.99
20	29	0.32	32	5.8	0.5	3	23	731	752	730	752	0.96
21	29	7.2e-06	0.00073	20.4	1.1	1	23	758	781	758	781	0.98
22	29	0.077	7.8	7.7	0.7	2	23	787	808	786	809	0.94
23	29	2.2e-05	0.0023	18.8	0.5	1	23	814	836	814	836	0.98
24	29	0.015	1.5	9.9	0.6	2	23	843	865	842	865	0.94
25	29	0.00012	0.012	16.6	2.5	1	23	886	909	886	909	0.93
26	29	0.0043	0.43	11.6	0.1	1	23	920	942	920	942	0.95
27	29	0.017	1.7	9.8	3.6	1	23	948	970	948	970	0.94
28	29	1e-06	0.0001	23.0	1.1	1	23	976	998	976	998	0.98
29	29	3.5e-05	0.0036	18.2	0.1	1	21	1004	1024	1004	1025	0.96

Sequence Information

Coding Sequence: ATGATAATCTGTTTTAGTTCCCCACCGTTGGATCCCCTGCGGGACACGACCGCTTCCGAAGAGCCATGGAAGATCAGAATACCTCCCTATACTCCAGCGAAGGAGAGGAGATTGCCAAAAAGCCGAGTGAAAGGTGCACCGACGAGAAAGAATGAGAATGACGCGAAACCAAAGAACAAGATCGACCGCCGCCCGGAGTGCGACTATTGTGGCAAAAAGTTCTATGGGAAGTCGTTCCTAGTGTCGCACATGAGACAGCACAAACACCCCTGCGAGACCTGCGGGCAGACCTTCAAGCTGAGAAAAGACTTGAAGCTCCACTACGAGCAGATCCACGGGCCGCTGCTTTACCCCTGCGACATCTGCGAGTACAAGAGCAAGAACAAGTGGACGTTGAAGGATCACATCATCAGGAGGCACACCGGCAGCTACGTGTACACCTGCAAGATCTGCGAGAAGCAGTTCAAGATCAAGAACGACCTGAGGCAGCACACCAACCAGATGCACAACAACCAGCCGCCCATCATCTGCACCGTCTGCGGCCATCCGAACAAGAGCCTTCCGGCGTTGAAGTCGCACATGAGGTACAGGCACTTCAGGCCGGAGCACGAGTGCAGCATATGCAAGCGCCGATTGATGACGCAGGACAGCCTCGAGCAGCACTTGCTCTGGCACGAGAGGCAGGAGAAGGTGGTCTGTCCCACCTGCGGCAAGATCTTCAGCCAGAGGAGAGACCTGAACCTTCACATCAGGATCCACGAAGGTATCAAGCCATTCACCTGTCCCATCTGCGGCAAATCATTCTCGAGGAGGACTGCCCAAGAACAGCACATACTGATACACACTGGCATGAGGCCTTACGCCTGCGATATCTGCGGGCAAGCTTTCGCTCAGAAACCAGGACTGATTTGCCATAGGAAGCGACACCCTGGACCTCTGCCACCGCTGCCCGTGATCTCCATTAAGAAGCTGATCAACGAATTCACCGAGAGCTTGGCGGACGCGTCCATGGAAAAGGACGAGTCTGCCAGCGAGTCGGGGGAGAAGGATGAATCTGTGCAGGCATCGAAGGAAAGGGATGAGTCTGTGCAGGGATCGAAGGAGGACGAAGCTGTCCAAGCTTCCAAAGAGGACGAAGTGAAGGAAGAACTGGAGTCGCGAAGGGCGAACTCGCGAGCGGTGCACGAGTGCGTGAAATGCGGGGCCTGCTTCTGTCACACGAGGAAGCTGGTGGAGCACCTGAAGAATCTGCACGACATCGACAGAGCGTTCAGCTGCGACGAGTGCGGCAAAACCTTTCGAAGCCCGATGAACATAGCCCGCCACAAACGCATTCACGCGGACTTGAAGAAATTCTCCTGCGACCTGTGCGACTATCGGTCCAACCAGAAGTCGAACCTCGAGATCCATCGCCGACGGCACACCAAGGACTACGCGTTCAGGTGCGAGGAATGCCAGAAAGGCTTCGTCTCGAGGGCGGAGTACCTGGTGCACGTGAACATCCACACGAGGAAGCATATCTATCGGTGCGAGCACTGCGACAAGTCCTACCCTTACAAGAAGAACCTCACCACCCACCGGAAACGCCAGCACCCGAGCACTCTGCCCGCGGACCAGGCGAGGAACGTGAAGCTCAAGTACGCGTGCCAGGTGTGCCTGGAAGGTTTCGCGCAGAAGCTGCTCTTGGATAGGCATCTGAAGAAGCAGCACGGGCTGCACGACAAGGTGAAGCATCTGTGCGACCTGTGCGGCGCGGTGTTGTCTTCCAAGCGACGATTGATGGAGCACAGGCGGGGCCACGTGTACGAGAAGACCGTCAAGTGCGAGTTGTGCGACAAGATGTTCGCCAGCAAAGAGTACCTCAGCGTTCATCGGCGCATACACACGGGCGAAAAGCCGTACGGTTGCTCGCAGTGCGACAGGAGGTTCACGCAGAGGACCGCTTTGATCTTGCACATTCGGTACCACACAGGGGAGAGACCGTATCAATGCGCCGACTGTGGCAAGGGCTTCATATCTGGCAGCTTCCTTCAGAAACATCGCAGGATACACGAGAAAGCTTCGCTGGTCGGGGCTGGACCCCAGTGGGACAATGGTCGCGAGGATCTTGCCAGCTGCGACGATTTCAAGATCAAGAGCGAGGATATTCTTCTACAGGCTGGGCAGAAGTTCGAGGGTAACGAGAAGGCCTGCGACCTCTGCCAAGAAAAGTTCCATTTCGTGACCAGATTAGTGGCACATTTGAGGATCGTTCATGGTATTCACAGACCCTTCAAGTGTGACACCTGCGGCAAGACGTATCCACAGCAGTTTATGCTGAACGCCCACGTGAAGAAGACCCACACGCCGAAGACGATCCCTTGCAACCAGTGCAACTTCATGGGGGTGAATGCGACCGATGTGGAGAGGCATACCAAGCGACACCATCGCGAGGAGAAGTTCACCTGTGAGATCTGCAGCGAGAGCTTTGAGGACAAAGACTCGCTGATGACGCACACGACTATGCACAACTTCATGCAGTATCAACAGTGCAACGCCTGCGGTAGCACCTTCAACGATATGTACAGTTTGAAGGAGCACAATCGATTGTACCACTACGACCCCGCGGCACTGATGCAAGAGAAGCTCGAGGAAGGGGACCAGCAGTCTTCGGAGCACAAGTGCAACGTTTGTGGCAAGGTTTACAAGTACAAGTCCGTGTTGAAGCAGCACAAAGTGAAGGCCCACGGCGACACCCCCAACTACGAGAGGCGCAGATACCTGTGCGCCCTTTGCGGCAAGGAGCTGAAGACAGCGAAGGGGTTGGAGATTCACAACCGTTCTCACACTGGCGAGAAACCGTACACCTGCGAGGTCTGCGGCAAGTGTTTCGCCTGCGAGACCCTGCTCAGGACTCACAACGTCACTCACACTGGAGAACGAAAGTATTCGTGCGACCAGTGCGGCAAAGCCTTCACCCAGAGGTCCACCCTGGTGGTGCACAAACGCTATCACACGGGTGAAAGGCCGTACGTATGTCCCCGTTGCGGAAAGGGCTTCGTAACGAGGACCGTTTTGAACACCCACATGAAATCCTGTCGCTGA
Protein Sequence: MIICFSSPPLDPLRDTTASEEPWKIRIPPYTPAKERRLPKSRVKGAPTRKNENDAKPKNKIDRRPECDYCGKKFYGKSFLVSHMRQHKHPCETCGQTFKLRKDLKLHYEQIHGPLLYPCDICEYKSKNKWTLKDHIIRRHTGSYVYTCKICEKQFKIKNDLRQHTNQMHNNQPPIICTVCGHPNKSLPALKSHMRYRHFRPEHECSICKRRLMTQDSLEQHLLWHERQEKVVCPTCGKIFSQRRDLNLHIRIHEGIKPFTCPICGKSFSRRTAQEQHILIHTGMRPYACDICGQAFAQKPGLICHRKRHPGPLPPLPVISIKKLINEFTESLADASMEKDESASESGEKDESVQASKERDESVQGSKEDEAVQASKEDEVKEELESRRANSRAVHECVKCGACFCHTRKLVEHLKNLHDIDRAFSCDECGKTFRSPMNIARHKRIHADLKKFSCDLCDYRSNQKSNLEIHRRRHTKDYAFRCEECQKGFVSRAEYLVHVNIHTRKHIYRCEHCDKSYPYKKNLTTHRKRQHPSTLPADQARNVKLKYACQVCLEGFAQKLLLDRHLKKQHGLHDKVKHLCDLCGAVLSSKRRLMEHRRGHVYEKTVKCELCDKMFASKEYLSVHRRIHTGEKPYGCSQCDRRFTQRTALILHIRYHTGERPYQCADCGKGFISGSFLQKHRRIHEKASLVGAGPQWDNGREDLASCDDFKIKSEDILLQAGQKFEGNEKACDLCQEKFHFVTRLVAHLRIVHGIHRPFKCDTCGKTYPQQFMLNAHVKKTHTPKTIPCNQCNFMGVNATDVERHTKRHHREEKFTCEICSESFEDKDSLMTHTTMHNFMQYQQCNACGSTFNDMYSLKEHNRLYHYDPAALMQEKLEEGDQQSSEHKCNVCGKVYKYKSVLKQHKVKAHGDTPNYERRRYLCALCGKELKTAKGLEIHNRSHTGEKPYTCEVCGKCFACETLLRTHNVTHTGERKYSCDQCGKAFTQRSTLVVHKRYHTGERPYVCPRCGKGFVTRTVLNTHMKSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00087358;
90% Identity: iTF_00085600;
80% Identity: -