Basic Information

Gene Symbol
ct
Assembly
GCA_030264675.1
Location
JARJDV010006024.1:75112-113817[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 5.5e-27 3e-23 81.5 0.0 3 72 499 569 497 574 0.94
2 4 2.6e-32 1.4e-28 98.5 0.0 3 77 878 953 876 955 0.96
3 4 0.4 2.2e+03 -1.4 0.0 40 65 973 998 954 1000 0.79
4 4 1.6e-30 8.9e-27 92.8 0.0 3 75 1085 1158 1083 1162 0.95

Sequence Information

Coding Sequence
ATGCAGCCTACGGCAACGGCCAGCATACCGCCGCCAGCGGATATGGACTTGCAGGCGATGCAATCCATGGACTGGCTCTTCAAAAAAGAGAGGATCTATTTGCTCGCACAATTTTGGCAACAGaGAGCCACCCTGGCTGAGAAAGAAGTGTCGACGCTCAAGGAGCAGCTCGCCACGAACACATCGCTCtcgccgccaacgccaacGAGTGTCGGCGCACAGCGcacctcgccgccgccgacgcccGCCGAGTCCAACCACAAAGAGATGGATCGGACAACGTACGAGAATGAAATCGCTGCCAAAGAAAAAGAGAACGCACAGTTGCTGGAAGAGGTCCAACGACTACAAGTGAGCCTAACGAGTTCGATGTCGCAGATCTCGCGATTGGAGGAGCAACTCGATCAGAAACGGCAGCAGATCGCTCGACTTGAGACGAAATTGGACGTGCAGCGAGACTACGACGATCTTAAGCGGGAACTTAGCATATTACGCACGGAGCTCGTGCACTGCAccaccggcggcggcaacgataAGCCACCGTCAAATCTCGTCGAAGCGCTGCTCGAGAGATCGAAGCaacagcaccaccaccaccaccaccatcacctCCAGCATcaccagcaacagcaacagcatcagcagcagcagcagcaggacaGATGCAAGTCGCCGAGTTCGGAAGTCGAAGGTGACCAAGTCAAACCCCTGTGTACCAGTAACAATCAAACATacgaaaatcatttaaaattcgttCAAAATCTCCTACCCGATCACCTGCAAAACGTCGAACAATTCGGCTCGCTGTTGGGCGAAGAGATCGTCGCCAATTGGCGACGTTCGCTCGCTGAACACGCGACCGcccaaccgccgccgccatcgacGAGCACATCGAAACTATTTTCATCCTCATCCTCCTCATCTGCAGATGGACCAGCAGCAGCCgtagtagcagcagcagcgacaataacgccgccgccgccaccgacgccgGTGTCCGCCGCGGTGGCCGTAACGCCGTCGAAAACGCCAACTCCGCTGTCGGCCGCGTCGACGCCGGCCATCATCACCGCCAACACCACCACGAcgaacaacagcaacaacaccCCGTCGCTATCATCGAACAACACCGACGCCAAGTCGACCGCGTCGACGCCGCAACCTGTTGAACCGCAGCCGTCGCCCATTCTTCTCAATGGCAATCCCAAGTCGCCCGAGGACAACAACAATCACCATCTCAGTAACAACAATCTGCCGCTGGCGGCGAGCGCAACGGCGGCGATGCTCAACATGAACTCCTTCCTGCGCAATGATGATCTCAAGTCGCCGTATCGCTTCGACGATCCGCATCGCAGCTATCGGTACGCCGAAGAACTGGGTCTGGCACCAGGTAGCATGGTCTCGCGGCTCGGCGAGAGTCTGATACCGAAGGGCGATCCGATGGAGGCGAAACTCCAGGAGATGTTGCGCTACAACATGGACAAGTACGCCAATCAAAACCTGGACACACTGCACATATCCCGACGCGTTCGCGAGTTGCTCTCCATCCACAATATCGGGCAACGTCTGTTCGCCAAGTACATTCTGGGCCTGTCCCAGGGCACCGTGTCCGAACTGCTCTCCAAGCCAAAGCCGTGGGACAAGCTCACCGAGAAAGGACGCGACAGCTATCGCAAGATGCACGCCTGGGCCTGCGACGATCACGCTGTCATGCTGCTCAAATCCCTGATACCAAAGAAAGATTATTTTTCATCCTCAGGCAAAGACAGCGCTGGCCCCGGTATGCCACCATTTGCAAGCCGCCCCGAGGCTGACCTCACCGACGAGCGAATCGCTCACATCCTGAACGAAGCTCAACACTTGCAAGCAAAGAACCACGAGCAGGATAGCCACAGCAATGATGACTCCAAGTCTCCGCATGGCCAATGTCTATCGCCATTTTCAAAGGATTCATCGCAGAATCGAAGACTCAAAAAGTACGAAAATGATGATATTCCTCAAGAGAAGGTCTATAAGATCTATCAGGAGCAATTAGTGAAAATAATGGGCAAGGACTTCCGTAACGCAGCAGGTTTCCCGGGTTTCTTTCTTCCACAATTATTTAGCGAAAATCCCATGGAGCGCACACCTGACGAAATACGGATGACGATTGAAGCGTATCATCGAGAGATGTTGAAGTTGAATCAGGGCCAAGGATTGTCAAATTTAGGCATCTTGGCTTTGCAACAGCAGGCACAGGCGTTAGCTCAAGGTCCCCTGAATGGCGGTGTGCAAGATCTATCTATTCCAAAagacaaaatcaaaaatggatcagaagagaaagaaaagcTTGATCAGAGTGCGGATGATAAGCATTCTGGCAGCGCGTTTTCTCTGGTTCGTCCTAAATTAGAGCCTGGAACGCCAGGACATCCTAATTCGACTGCATCAAGTCCATTGGGCAATTCCATTCTTCCACCCGCTACAACAGAAGAATTCTCGAGCTCTTCGGTCGCCTCACCCCTGCAGCGAATGGCTTCCATTACAAATTCGCTTATATCGCAGCCACCCTCGCAGCCCCATCACAACACAGCTCAGCGTCCTCTTAAGGCCGTTCTACCTCCAATCACACAGCAACAGTTTGACCTCTACAATAATTTGAACACCGAAGACATTGTGAAGAAAGTCAAGGAACAATTAAGCCAATATTCTATCAGCCAGAGATTGTTCGGCGAATCGGTTCTTGGCTTATCACAAGGATCTGTCAGCGATTTACTGGCCAGACCAAAGCCTTGGCATATGTTGACACAGAAAGGTCGTGAGCCCTTCATACGTATGAAGATGTTCTTGGAGGATGAAAACGCTGTTCATAAATTAGTCGCCAGTCAGTACAAAATTGCCCCAGAGAAGCTAATGCGCACTGGCGGCTATGGTGGCGCGTGTGCTACCATCAGCAAGCCAATGCCACCGAAAATGCTTAGTGAGGCTGCTGGATTGTTTAACAAAATGCAAGAATCGCAAAATCTCCTGCCACCGTCACTGCAACTCGGTGGACATCCCAATAACCcgcaaccaccaccacctccgaTGCTACTCACACCTCCGGGCGTGCCACCTCATCATGCTATTAATCTACAAAGTTCAGCCGATCATATGAAGAAAACGCAAAGTCCGCACGCGATTCAACATTCTCCTTTGGGTCAACAGCAAAGTGCCATGCGTAGTTTGCATCAGCATATATCGCCGAGCGTTTACGAAATGGCAGCATTGACACAAGACTTGGATACACAAGTTATAACAACCAAAATTAAGGAAGCATTATTAGCTAATAATATTGGCCAGAagATATTTGGTGAGGCTGTTTTGGGTTTATCGCAGGGGTCAGTAAGTGAACTTCTTTCTAAGCCAAAACCATGGCATATGCTTAGCATTAAAGGTCGCGAACCATTCATTCGGATGCAACTCTGGTTGAACGATGCTCATAACGTAGATCGACTGCAAGCTCTTAAGAACGAACGCCGTGAAGCAAATAAAAGACGACGGTCATCGGGACCAGGAGCACACGATAACTCATCAGACACTTCCTCGAATGATACGTCAGAGTTCTATCATTCAAACTCTCCAGGTCCGGGACCTCCATCAACAAAGAAACAACGAGTACTCTTTAGTGAAGAACAGAAAGAAGCTCTTCGCTTAGCATTTGTTATGGATCCATATCCCAATGTTACGACTATTGAATTTCTAGCGCAGGAACTTAACTTATCCAGTCGAACCATAACAAATTGGTTCCACAATCATCGAATGCGCTTGAAGCAACAAGTACCACATGGTTTAGCTAATGATATACCCCCGCGCGACCAATCCGGTAATCAAGCGCCTTTTGACCCAATGCAATTCCGACTGTTACTCAACCAAAGACTTATAGAATTATCAAAAGAGCGCATGGGTCTCGGTGGCGTCAACTTACCATATCCTCCGTATCTTGCAACAAATCCGAATCTGGCTGCGCTGATAAGTCGCGGAATCCTTCCATCCGGTGAAGACTTGGCAGCTCTTAATAATGCTGTCAAGGAACAAATGAGTGGATTAGATTTGTCTATGAGTAATCTTAAACGCGAACCCGGTGATTTCGACGATGAGGATGAACTTGAATCAAACGCCGGTTCGGACGACTCAAACGTATCCTCTCTGCATGGTGAGCCTAAAATAGAACCTAAAGAAACCCCAGTAAATCAAGGCCGTTCGCGAAGAAAACCCGCCGCTCCCCAGTGGGTGAATCCCGAGTGGCAAGACGAAAAAGAGAAAGCGCCTACCGGTGACGAAGTCATCATTAACGGTGTTTGTGTAATGCAAACTGAAGACTACGGTAGACGTAATTCGGAAGAAACGGTTCGTGTCGAACCCACTCCGGTCATGGACCGATTTGAAGATGATCAAAGTGAAGATGGCGAATCAGTGCGAAGTCCTGAACGTGATTCTCACGATCCTGCAGAAATCAAAAGTGAACGAGAGGATGACCCCTCCGACGATAGAGttgtaaaagaagaagaacccGAGGAGGAACGGTGGGACTATTAA
Protein Sequence
MQPTATASIPPPADMDLQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVSTLKEQLATNTSLSPPTPTSVGAQRTSPPPTPAESNHKEMDRTTYENEIAAKEKENAQLLEEVQRLQVSLTSSMSQISRLEEQLDQKRQQIARLETKLDVQRDYDDLKRELSILRTELVHCTTGGGNDKPPSNLVEALLERSKQQHHHHHHHHLQHHQQQQQHQQQQQQDRCKSPSSEVEGDQVKPLCTSNNQTYENHLKFVQNLLPDHLQNVEQFGSLLGEEIVANWRRSLAEHATAQPPPPSTSTSKLFSSSSSSSADGPAAAVVAAAATITPPPPPTPVSAAVAVTPSKTPTPLSAASTPAIITANTTTTNNSNNTPSLSSNNTDAKSTASTPQPVEPQPSPILLNGNPKSPEDNNNHHLSNNNLPLAASATAAMLNMNSFLRNDDLKSPYRFDDPHRSYRYAEELGLAPGSMVSRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDHAVMLLKSLIPKKDYFSSSGKDSAGPGMPPFASRPEADLTDERIAHILNEAQHLQAKNHEQDSHSNDDSKSPHGQCLSPFSKDSSQNRRLKKYENDDIPQEKVYKIYQEQLVKIMGKDFRNAAGFPGFFLPQLFSENPMERTPDEIRMTIEAYHREMLKLNQGQGLSNLGILALQQQAQALAQGPLNGGVQDLSIPKDKIKNGSEEKEKLDQSADDKHSGSAFSLVRPKLEPGTPGHPNSTASSPLGNSILPPATTEEFSSSSVASPLQRMASITNSLISQPPSQPHHNTAQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGGACATISKPMPPKMLSEAAGLFNKMQESQNLLPPSLQLGGHPNNPQPPPPPMLLTPPGVPPHHAINLQSSADHMKKTQSPHAIQHSPLGQQQSAMRSLHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSTKKQRVLFSEEQKEALRLAFVMDPYPNVTTIEFLAQELNLSSRTITNWFHNHRMRLKQQVPHGLANDIPPRDQSGNQAPFDPMQFRLLLNQRLIELSKERMGLGGVNLPYPPYLATNPNLAALISRGILPSGEDLAALNNAVKEQMSGLDLSMSNLKREPGDFDDEDELESNAGSDDSNVSSLHGEPKIEPKETPVNQGRSRRKPAAPQWVNPEWQDEKEKAPTGDEVIINGVCVMQTEDYGRRNSEETVRVEPTPVMDRFEDDQSEDGESVRSPERDSHDPAEIKSEREDDPSDDRVVKEEEPEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00048453;
90% Identity
iTF_00049048;
80% Identity
iTF_00083792;