Basic Information

Gene Symbol
ct
Assembly
GCA_963978815.1
Location
OZ022215.1:13408635-13417946[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 5e-27 2.7e-23 81.6 0.0 3 72 374 444 372 449 0.94
2 4 2.4e-32 1.3e-28 98.7 0.0 3 77 753 828 751 830 0.96
3 4 1.6 8.3e+03 -3.3 0.0 41 64 849 872 832 873 0.84
4 4 1.5e-30 7.8e-27 92.9 0.0 3 75 960 1033 958 1037 0.95

Sequence Information

Coding Sequence
ATGTCGCAGATTTCGCGATTGGAGGAGCAACTCGATCAGAAACGGCAGCAGATCGCCCGACTTGAGACAAAATTGGACGTGCAGCGTGACTACGACGATCTTAAGCGGGAACTTAGCATATTACGCACGGAGCTCGTGCACTGCACcaccggcggcggcaacgataAGCCACCGTCAAATCTCGTCGAAGCGTTGCTCGAGAGATCGAAGCaacagcaccaccaccaccaccaccatcacctCCAGCATcaccagcaacagcaacagcaacagcagcagcagcagcaggacaGATGCAAGTCGCCAAGTTCGGAAGTCGAAGGTGACCAAGTCAAACCCCTGTGTACCAGTAACAATCAAACATAcgaaaatcatttaaaattcgtTCAAAATCTCCTACCCGATCACCTGCAAAACGTCGAACAATTCGGCTCGCTGTTGGGCGAAGAGATCGTCGCCAATTGGCGACGTTCGCTCGTTGAACACGCGACCGCccaaccgccgccgccatcgacGAGCACATCGAAACTATTTTCATCCTCATCCTCCTCATCTGCAGATGGACCAGCAGCCGTAGTAGCAGCAGTGACAataacgccgccgccgccaccgacgcCGGTTTCTTCCGTGGTGGCCGTGACGCCGTCGAAAACGCCAACCCCGCTGTCGGTCGTGCCGACGCCGGCCATCatcaccgccaccaccaccaccaacaacaacaacaacaacaccccATCGCTATCATCGAACAACACCGACGCCAAGTCGACCGCCTCGACGCCGCAACCTGTTGAACCGCAGCCGTCGCCCATTCTTCTCAACGGCAATCCCAAGTCGCCCGAGGACAACAACAATCACCATCTCAGCAACAACAATCTGCCGCTGGCGGCCAGCGCGACGGCGGCAATGCTCAACATGAACTCCTTCCTGCGCAATGATGATCTCAAGTCGCCGTATCGCTTCGACGATCCGCATCGCAGCTATCGATACGCCGAAGAACTGGGCTTAGCACCAGGCAGTATGGTCTCGCGGCTCGGTGAGAGCCTGATACCGAAGGGTGATCCGATGGAGGCGAAGCTCCAGGAGATGTTGCGCTATAACATGGACAAATACGCCAACCAAAACCTGGATACACTGCACATATCCCGACGCGTTCGCGAGTTGCTCTCCATCCACAATATCGGGCAACGTCTGTTCGCCAAGTACATTCTGGGCCTATCCCAAGGCACCGTCTCCGAACTGCTCTCCAAGCCGAAGCCATGGGACAAGCTCACCGAAAAAGGACGCGACAGCTATCGCAAGATGCACGCCTGGGCCTGCGACGATCACGCTGTCATGTTGCTCAAATCCCTGATACCAAAGAAAGATTATTTTTCATCCTCAGGCAAAGACAGCGCTGGCCCCGGTATGCCACCATTTGCAAGCCGCCCCGAGGCTGACCTCACCGACGAGCGAATCGCTCACATCCTGAACGAAGCTCAACACTTGCAAGCAAAGAACCACGAACAGGATAGCCACAGCAATGATGACTCCAAGTCTCCGCATGGCCAATGTCTATCACCATTTTCGAAGGATTCATCGCAGAATCGACGACTCAAGAAGTACGAAAATGATGATATTCCACAAGAAAAGGTCTATAAGATCTATCAGGAACAATTAGTGAAAATTATGGGCAAAGACTTCCGTAACGCGGCAGGTTTCCCGGgTTTCTTTCTTCCACAATTATTTAGCGAAAACCCCATGGAGCGCACACCTGACGAAATACGGATGACGATTGAAGCGTATCATCGAGAGATGTTGAAGTTGAATCAGGGCCAAGGATTGTCAAATTTAGGCATTTTGGCGTTGCAACAGCAAGCACAGGCATTAGCTCAAGGTCCACTGAATGGCGGCGTGCAAGACCTATCTATTCCAAAAGACAAAATCAAAAACGGATCGGAAGAGAAAGAAAAGCTTGATCAGAGTGTGGAAGATAAGCATTCTGGCAGCGCGTTTTCTCTGGTACGTCCGAAATTGGAGCCTGGAACACCAGTGCATCCGAATTCGACTGCATCAAGTCCACTTGGCAATTCCATTCTTCCACCCGCTACAACCGAAGAATTCTCTAGCTCTTCGGTCGCCTCACCCTTACAGCGAATGGCTTCCATTACAAATTCGCTTATATCGCAGCCACCCTCGCAGCCCCATCACAACACAGCTCAGCGTCCTCTGAAGGCCGTTCTACCTCCAATCACACAGCAACAGTTTGACCTCTACAATAACTTGAACACCGAAGACATTGTTAAGAAAGTTAAGGAACAATTAAGCCAATACTCCATCAGCCAGAGATTATTTGGCGAATCAGTTCTTGGTTTATCACAAGGATCTGTGAGTGACTTGCTCGCTAGACCGAAGCCTTGGCATATGCTAACGCAGAAAGGTCGTGAGCCCTTCATACGTATGAAGATGTTCTTGGAGGATGATAACGCTGTTCATAAATTAGTCGCCAGTCAGTACAAAATTGCCCCAGAGAAGCTAATGCGCACTGGCGGCTATGGTGGCGCATGTGCTACCATCAGCAAGCCAATGCCACCGAAACTGCTTAGTGAGGCCGCGGGATTGTTTAACAAAATGCAAGAATCGCAAAATCTCCTGCCACCATCACTTCAGCTCGGTGTACATCCAAATAACCCACAACCACCACCGCCTCCGATGCTACTCACACCTCCGGGCGTGCCACCTCATCATGCTATTAATTTACAAAGTTCAGCCGATCACATGAAGAAAACGCAAAGTCCGCATGCGATTCAACATTCTCCTTTGGGTCCACAGCAAAGTGCCATGCGTAGTTTGCATCAGCATATATCACCAAGCGTTTACGAAATGGCTGCATTGACACAAGACTTGGATACTCAAGTTATAACAACCAAAATCAAGGAAGCGTTATTAGCTAATAATATTGGCCAGAAGATATTTGGCGAAGCTGTCTTGGGTTTATCACAAGGGTCAGTAAGTGAACTTCTTTCTAAGCCAAAACCATGGCATATGCTTAGCATTAAAGGTCGCGAACCATTCATTCGAATGCAGCTTTGGTTGAATGATGCTCATAACGTAGATCGACTGCAAGCGCTTAAGAATGAACGCCGTGAAGCAAATAAAAGACGACGGTCATCAGGACCAGGAGCACATGATAACTCATCCGATACTTCCTCGAATGATACGTCCGAGTTTTATCATTCGAATTCTCCAGGTCCGGGGCCGCCATCAACAAAGAAACAACGAGTACTCTTTAGTGAAGAACAAAAGGAAGCTCTTCGCTTAGCATTTGTTATGGATCCATATCCTAATGTTACGACTATTGAATTTCTAGCGCAAGAACTTAACTTATCCAGTCGAACCATAACAAATTGGTTCCACAATCATCGAATGCGCTTGAAGCAACAAGTACCACATGGTTTAGCTAATGATATACCTCCGCGCGACCAATCTGGTAATCAAGCACCTTTTGACCCAATGCAATTCCGACTGTTACTCAACCAAAGACTTATAGAATTATCAAAAGAGCGCATGGGTCTCGGTGGCGTCAACTTACCATATCCTCCGTATCTTGCAACAAATCCTAATCTCGCCGCGCTGATAAGTCGCGGAATCCTACCATCCGGTGAAGAGTTGGCAGCTCTTAATAATGCTGTCAAGGAACAAATGAGTGGATTAGATTTGTCTATGAGTAATCTTAAACGTGAACCCGGTGATTTCGATGATGAGGACGAACTTGAATCCAACGCCGGTTCGGACGACTCAAACGTATCCTCTCTACATGGTGAGCCTAAAATTGAACCTAAAGAAACCCCAGTGAATCAAGGCCGTTCGCGAAGAAAACCGGCCGCTCCCCAGTGGGTGAATCCCGAGTGGCAAGATGAAAAAGAGAAACCGCCTACCGGTGATGAAGTAATCATTAACGGCGTTTGTGTAATGCAAACTGAAGACTACGGTAGGCGTAATTCGGAAGAAACTGTTCGTGTTGAACCCACCCCGGTGATGGACCGATTTGAAGATGAACAAAGTGAAGATGGCGAATCAGTGCGAAGTCCTGAACGCGATTCTCACGATCCTGCAGAAATCAAAAGTGAACGAGAGGACGATCCCTCTGACGATAGAGCtgtaaaagaagaagaacccGAGGAGGAACGGTGGGACTATTAA
Protein Sequence
MSQISRLEEQLDQKRQQIARLETKLDVQRDYDDLKRELSILRTELVHCTTGGGNDKPPSNLVEALLERSKQQHHHHHHHHLQHHQQQQQQQQQQQQDRCKSPSSEVEGDQVKPLCTSNNQTYENHLKFVQNLLPDHLQNVEQFGSLLGEEIVANWRRSLVEHATAQPPPPSTSTSKLFSSSSSSSADGPAAVVAAVTITPPPPPTPVSSVVAVTPSKTPTPLSVVPTPAIITATTTTNNNNNNTPSLSSNNTDAKSTASTPQPVEPQPSPILLNGNPKSPEDNNNHHLSNNNLPLAASATAAMLNMNSFLRNDDLKSPYRFDDPHRSYRYAEELGLAPGSMVSRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDHAVMLLKSLIPKKDYFSSSGKDSAGPGMPPFASRPEADLTDERIAHILNEAQHLQAKNHEQDSHSNDDSKSPHGQCLSPFSKDSSQNRRLKKYENDDIPQEKVYKIYQEQLVKIMGKDFRNAAGFPGFFLPQLFSENPMERTPDEIRMTIEAYHREMLKLNQGQGLSNLGILALQQQAQALAQGPLNGGVQDLSIPKDKIKNGSEEKEKLDQSVEDKHSGSAFSLVRPKLEPGTPVHPNSTASSPLGNSILPPATTEEFSSSSVASPLQRMASITNSLISQPPSQPHHNTAQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACATISKPMPPKLLSEAAGLFNKMQESQNLLPPSLQLGVHPNNPQPPPPPMLLTPPGVPPHHAINLQSSADHMKKTQSPHAIQHSPLGPQQSAMRSLHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSTKKQRVLFSEEQKEALRLAFVMDPYPNVTTIEFLAQELNLSSRTITNWFHNHRMRLKQQVPHGLANDIPPRDQSGNQAPFDPMQFRLLLNQRLIELSKERMGLGGVNLPYPPYLATNPNLAALISRGILPSGEELAALNNAVKEQMSGLDLSMSNLKREPGDFDDEDELESNAGSDDSNVSSLHGEPKIEPKETPVNQGRSRRKPAAPQWVNPEWQDEKEKPPTGDEVIINGVCVMQTEDYGRRNSEETVRVEPTPVMDRFEDEQSEDGESVRSPERDSHDPAEIKSEREDDPSDDRAVKEEEPEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00048453;
80% Identity
iTF_00049163;