Basic Information

Gene Symbol
ct
Assembly
GCA_003054995.1
Location
NBZA01001359.1:21028-56282[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3.7e-27 3.2e-23 81.5 0.0 3 72 520 590 518 595 0.94
2 4 1.8e-32 1.5e-28 98.5 0.0 3 77 884 959 882 961 0.96
3 4 0.27 2.4e+03 -1.4 0.0 40 65 979 1004 960 1005 0.78
4 4 1.1e-30 9.4e-27 92.8 0.0 3 75 1091 1164 1089 1168 0.95

Sequence Information

Coding Sequence
ATGCAGCCAACGGCAACGGCCAGCATACCGCCGCCAGCGGATATGGACTTGCAGGCGATGCAATCCATGGACTGGCTCTTCAAAAAGGAGAGGATCTATCTGCTCGCACAGTTCTGGCAACAGTTCATTCTCGGGTGGTTTTCTCATCCCTTCCCCTCACACCCAAAAATTGGATATCGGGCCAAAGCCCATGAGGGTAAACTGCTGCTTGCTGAACAACAACTTCCCATACAAGcactgccagtgccagtggcaAGAGCCACCCTGGCCGAGAAAGAAGTGTCGACGCTCAAGGAGCAACTCGGCACCAACCCCACGTCGATGATTTCGCCGCCGCAGCGAACGACGACATCGTCGCCGCCACCACAGAGCCTCGCCAGCGACTCCAACCACAAAGAGATGGAAAGGAACGCGTACGAGAATGAAATTGCTGCCAAAGATAAAGAAAACGCACAGTTGCTGGAAGAGGTCCAACGACTACAAGTGAGCCTAAAGAGTTCGATGTCGCAGATCTCGCGATTGGAGGAGCAGCTCGATCAGAAACGGCAGCAGATCGCCCGGCTCGAGACGAAATTGGACTCGCAGCGCGACTACGACGATCTTAAGCGGGAACTTAGCGTATTACGCACGGAGCTCGTCAACTGCACCACCGGCGGCACCGACAAGCCGTCGTCGAATCTCGTCGAGGCGCTCCTGGAGAGATCGAAGCAACAGCACCAGCATccgcagcagcaacagcaacaggaCCGATGCAAGTCCCCAAGTTCGGAAGTCGAAGGTGACCAAGTTAAACCCTTGTGTACTAGTAACAATCAAACATACGAAAACCATTTAAAATTCGTACAAAAACTCCTACCCGATCACCTGCAAAACGTCGAACAGTTCGGCACGCTGTTGGGCGAAGAGATCGTCGCCAAGTGGCGGCGTTCGCTCGTCGAACACGCGCCATCCGCCcaaccgccgccgccgtcgaccACCACATCGAAACTAttttcatcctcatcctcctCATCTGCAGATGGACCAGCGGCGACAAAAACTCCGCCGCCTCCGTTACCGCTGTCACTGtcgctgcctctgcctctgccgctgccgttgccgctgccaGCGTCGTCCACCGCGTCCaaaacgccaacgccaacgccgaCCCCGATGCCCACCAGCACCCCATCGCTCTCCTCCAGCAACACCGACGCCAAGTCCACCGCGTCGACGCCGCAACCTGTTGAACTGCAGCCGTCGCCCATCCTGCTGAACGGCAACCCCAAGTCGCCCGAGGACAACAACAATCATCACCTCAGCAATAACAATCTTCCACTGGCGGCCAGCGCCACGGCAGCGATGCTCAACATGAACTCCTTCCTGCGCAACGATGATCTCAAATCGCCGTACCGCGCGTTCGACGATCCACACCGCAGCTACCGGTACGCCGAGGAGCTCGGCCTGGCGCCCGGCAGCATGGTCTCCCGCCTCGGCGAGAGCCTCATCCCCAAGGGCGACCCCATGGAGGCGAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTACGCCAACCAGAACCTGGACACCCTGCACATATCTCGTCGCGTCCGCGAACTCCTCTCCATTCACAATATCGGACAACGACTCTTTGCCAAATACATCCTCGGGCTGTCTCAAGGAACTGTGTCCGAACTGCTCTCCAAGCCAAAGCCGTGGGACAAGCTCACCGAGAAGGGCCGCGACAGCTACCGCAAGATGCACGCCTGGGCCTGCGATGATCACGCAGTCATGCTCCTCAAATCCCTCATACCAAAGAAAGGCAAAGACAGCGCTGGCACTGGTGGTATGCCGCCTTTTGCAAACCGCCCCGAGTCGGACCTCACCGACGAACGCATCGCCCACATCCTGAACGAAGCCCAGCACTTGCAGATGAAGAACGAGCAAGACAGCCACAGCAACGACGACTCCAAGTCGCCGCATCAGTGTCTGTCGCCGTTCTCCAGAGATTCGTCTCAGAATCGCCGACTTAAGAAGTACGAGAACGACGATATCCCGCAAGAGAAAGTCTATAAGATCTATCAGGAAGAGCTGGCTAAGATTATGGGCAAGGATATTCGCAGCGTGACTGGCTTCCAAGGCGGCAATCCACTCGATCGCACGCCGGACGAAATTCGGATGACAATAGAAGCGTATCACCGTGAAATGATAAAGTTGAACCAAAGCCAAGGATTGTCTAATTTAGGCATATTGGCTCTGCAGCAGCAAGCTCAAGCGCTCGCACAAAGCCCGCTCAACGGCGGCGTGCAGGATCTCTCAATTCCAAAAGACAAAATCAAAAATGGCTCAGAGGAAAAGGAGAAGAACGAGCCGGCAATGGATGATAAACATTCGGGCAGCGCATTCTCCCTGGTGCGACCAAAGATGGAACCTGGCACACCAGCGCGTCCGAACTCGACTGCATCCAGTCCGCTTGGCAACTCCATTCTTCCCCCGGTGACCACTGAAGAGTTCTCCAGCTCTTCGGTTGCCTCACCACTGCAGCGAATGGCTTCCATCACAAACTCACTCATTTCGCAGCCACCGTCTCAGCCGCATCACAGCACATCTCAACGTCCACTCAAGGCAGTTCTACCTCCAATCACTCAGCAACAATTCGACCTCTACAATAACTTGAATACGGAAGATATCGTTAAGAAAGTGAAGGAACAATTGAGCCAGTACTCCATTAGCCAAAGATTGTTTGGAGAATCTGTTCTCGGATTATCGCAAGGCTCGGTCAGCGATTTGCTTGCGAGACCGAAGCCTTGGCACATGTTGACTCAGAAAGGCCGCGAGCCCTTCATTCGTATGAAAATGTTCTTAGAGGACGACAACGCCGTGCATAAATTAGTAGCCAGCCAGTACAAAATTGCCCCAGAGAAGCTAATGCGCACCGGAGGCTACGGTGGAGCGTGCGCGACCATCAGCAAGCCAATGCCTCCTAAAATGCTCAGCGAAGCGGCAGGATTATTCAACAAGATGCAAGAGTCGCAGAATCTTCTTCCGCCTTCGCTACAGCTCGGAGGACATCCAAATGTGCCCCAACCGCCGCCTCCACCCATGCTGCTTACGCCTCCCGGTGTTCCTCCACATCACGCAATCAACTTGCAAAGTTCAGGCGATCACATGAAGAAAACTCAAAGCCCGCATTCGATTCCACATTCGCCTTTGGGTCCACAACAGAGTGCCATGCGAAGTCTTCACCAGCATATCTCTCCTAGTGTCTACGAAATGGCAGCATTAACTCAAGACTTGGATACTCAAGTGATCACGACGAAAATTAAAGAAGCTTTGTTGGCTAACAATATAGGTCAAAAgATCTTTGGAGAAGCAGTTTTGGGTTTATCTCAGGGTTCTGTAAGTGAACTGCTATCAAAACCAAAACCTTGGCATATGCTTAGCATTAAGGGTCGTGAACCATTCATTCGCATGCAACTTTGGCTGAATGACGCTCACAATGTAGATCGTTTACAAGCTCTTAAGAACGAACGACGTGAGGCTAACAAACGGCGTCGATCATCTGGCCCTGGTGCGCATGATAACTCATCGGATACCTCTTCAAATGATACGTCAGAGTTCTATCATTCAAACTCTCCTGGTCCTGGGCCGCCATCCGCCAAAAAACAACGCGTCTTGTTTAGCGAGGAACAGAAAGAAGCTCTGCGACTTGCATTTGTCATGGATCCATATCCCAATGTGACCACAATTGAGTTTCTTGCTCAAGAACTCAATCTTTCTAGTAGAACCATAACCAACTGGTTTCACAACCATCGAATGCGCTTGAAGCAACAAGTTCCACATGGTCTCGCTAATGATATTCCAGCTCGCGACCAAACTGGTAACCAGCCTCCATTTGACCCAATGCAATTCCGACTGTTACTCAACCAAAGACTTATAGAATTATCTAAAGAGCGCATGGGTCTTGGAGGTATCAACCTACCATATCCCCCTTATCTTGCTACGAATCCTAATCTTGCGGCGTTGATCAGTCGCGGTATACTACCTTCTGGTGAAGAACTGGCTGCTCTGAATAACGCAGTCAAGGAGCAAATGAGTGGGTTAGATCTATCGATGAGTAATCTCAAGCGAGAACCCGGTGACTATGATGATGAGGACGAAATGGAATCAAATGCTGGTTCCGACGACTCAAATGTTTCTTCGTTGCATGGTGAGCCAAAGATTGAACCTAAGGAAACGCCAGTGAACCAGGGTCGATCGCGGAGAAAACCTGCAGCGCCCCAGTGGGTGAATCCTGAATGGCAGGACGAGAAGGAAAAGCCACCTACAGGCGACGAGGTCATTATCAACGGTGTCTGCGTTATGCAGACTGAAGATTACGGTCGTCGCAATGCGGAAGAAACTGTTCGTGTTGAACCAACGCCAGTGATGGACCGGTACGAAGATGAACAAAGTGAAGACGGCGAATCTGTGCGAAGTCCCGACCGCGATGCTCACGATCCCGCTGAAATCAAAAGTGAAAGAGACAACGATGCTTCCGATGAAAAGGTGGTCAAAGACGAAGAGGCTGAGGAAGAACGGTGGGACTATTAA
Protein Sequence
MQPTATASIPPPADMDLQAMQSMDWLFKKERIYLLAQFWQQFILGWFSHPFPSHPKIGYRAKAHEGKLLLAEQQLPIQALPVPVARATLAEKEVSTLKEQLGTNPTSMISPPQRTTTSSPPPQSLASDSNHKEMERNAYENEIAAKDKENAQLLEEVQRLQVSLKSSMSQISRLEEQLDQKRQQIARLETKLDSQRDYDDLKRELSVLRTELVNCTTGGTDKPSSNLVEALLERSKQQHQHPQQQQQQDRCKSPSSEVEGDQVKPLCTSNNQTYENHLKFVQKLLPDHLQNVEQFGTLLGEEIVAKWRRSLVEHAPSAQPPPPSTTTSKLFSSSSSSSADGPAATKTPPPPLPLSLSLPLPLPLPLPLPASSTASKTPTPTPTPMPTSTPSLSSSNTDAKSTASTPQPVELQPSPILLNGNPKSPEDNNNHHLSNNNLPLAASATAAMLNMNSFLRNDDLKSPYRAFDDPHRSYRYAEELGLAPGSMVSRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDHAVMLLKSLIPKKGKDSAGTGGMPPFANRPESDLTDERIAHILNEAQHLQMKNEQDSHSNDDSKSPHQCLSPFSRDSSQNRRLKKYENDDIPQEKVYKIYQEELAKIMGKDIRSVTGFQGGNPLDRTPDEIRMTIEAYHREMIKLNQSQGLSNLGILALQQQAQALAQSPLNGGVQDLSIPKDKIKNGSEEKEKNEPAMDDKHSGSAFSLVRPKMEPGTPARPNSTASSPLGNSILPPVTTEEFSSSSVASPLQRMASITNSLISQPPSQPHHSTSQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACATISKPMPPKMLSEAAGLFNKMQESQNLLPPSLQLGGHPNVPQPPPPPMLLTPPGVPPHHAINLQSSGDHMKKTQSPHSIPHSPLGPQQSAMRSLHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFVMDPYPNVTTIEFLAQELNLSSRTITNWFHNHRMRLKQQVPHGLANDIPARDQTGNQPPFDPMQFRLLLNQRLIELSKERMGLGGINLPYPPYLATNPNLAALISRGILPSGEELAALNNAVKEQMSGLDLSMSNLKREPGDYDDEDEMESNAGSDDSNVSSLHGEPKIEPKETPVNQGRSRRKPAAPQWVNPEWQDEKEKPPTGDEVIINGVCVMQTEDYGRRNAEETVRVEPTPVMDRYEDEQSEDGESVRSPDRDAHDPAEIKSERDNDASDEKVVKDEEAEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2