Basic Information

Insect: Anastrepha obliqua
Gene Symbol: -
Assembly: GCA_027943255.1
Location: JAPTHQ010000163.1:822986-834881[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.4e-05 0.0076 18.0 1.7 1 23 511 533 511 533 0.97

2 18 1.7e-05 0.0023 19.6 0.4 1 23 539 561 539 561 0.97

3 18 0.0014 0.2 13.5 0.5 1 23 567 589 567 589 0.95

4 18 2.7e-05 0.0038 18.9 3.1 1 23 595 617 595 617 0.97

5 18 6.2e-05 0.0086 17.8 4.7 1 23 623 645 623 645 0.99

6 18 0.00011 0.016 17.0 5.7 1 23 651 673 651 673 0.97

7 18 5.5e-07 7.7e-05 24.3 4.3 1 23 679 701 679 701 0.98

8 18 2e-07 2.8e-05 25.7 2.4 1 23 707 729 707 729 0.97

9 18 0.00012 0.016 17.0 6.7 1 23 735 757 735 757 0.97

10 18 3.3e-05 0.0046 18.7 6.5 1 23 763 785 763 785 0.98

11 18 5.6e-06 0.00078 21.1 4.5 1 23 791 813 791 813 0.98

12 18 2.1e-05 0.0029 19.3 7.1 1 23 819 841 819 841 0.98

13 18 1.1e-05 0.0015 20.2 7.6 1 23 847 869 847 869 0.97

14 18 1.2e-06 0.00017 23.2 7.7 1 23 875 897 875 897 0.98

15 18 0.00037 0.052 15.4 9.5 1 23 903 926 903 926 0.95

16 18 0.00031 0.044 15.6 0.5 1 23 932 954 932 954 0.97

17 18 0.0014 0.19 13.5 4.4 1 23 964 986 964 986 0.98

18 18 1.6e-05 0.0023 19.6 1.6 1 23 992 1015 992 1015 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.4e-05	0.0076	18.0	1.7	1	23	511	533	511	533	0.97
2	18	1.7e-05	0.0023	19.6	0.4	1	23	539	561	539	561	0.97
3	18	0.0014	0.2	13.5	0.5	1	23	567	589	567	589	0.95
4	18	2.7e-05	0.0038	18.9	3.1	1	23	595	617	595	617	0.97
5	18	6.2e-05	0.0086	17.8	4.7	1	23	623	645	623	645	0.99
6	18	0.00011	0.016	17.0	5.7	1	23	651	673	651	673	0.97
7	18	5.5e-07	7.7e-05	24.3	4.3	1	23	679	701	679	701	0.98
8	18	2e-07	2.8e-05	25.7	2.4	1	23	707	729	707	729	0.97
9	18	0.00012	0.016	17.0	6.7	1	23	735	757	735	757	0.97
10	18	3.3e-05	0.0046	18.7	6.5	1	23	763	785	763	785	0.98
11	18	5.6e-06	0.00078	21.1	4.5	1	23	791	813	791	813	0.98
12	18	2.1e-05	0.0029	19.3	7.1	1	23	819	841	819	841	0.98
13	18	1.1e-05	0.0015	20.2	7.6	1	23	847	869	847	869	0.97
14	18	1.2e-06	0.00017	23.2	7.7	1	23	875	897	875	897	0.98
15	18	0.00037	0.052	15.4	9.5	1	23	903	926	903	926	0.95
16	18	0.00031	0.044	15.6	0.5	1	23	932	954	932	954	0.97
17	18	0.0014	0.19	13.5	4.4	1	23	964	986	964	986	0.98
18	18	1.6e-05	0.0023	19.6	1.6	1	23	992	1015	992	1015	0.96

Sequence Information

Coding Sequence: atgttgcagccacagccacaactggtaccaaggcaacaagcagcagcacaacaacatttacatcagcaacagcagagagattcaatggcgTTGAACGGAGGTGGTGGTGGTGGTGGTGGAAGCGGCGGTGGCGGCTCCGGCAATGTCACAGGCACAACTCCCCCTACCGTAGCTGGTGGTGGCACCGTCGCTGGTGGAGGTGGTGTCGTTGGCGTTGCAGGCAATACTTTAATACCGCTTGCAGTTCCTGcgcagcatcagccggtttcaattgcaactgtgacagcagccgccattgccgctgcagcagcagGGGTAGGAATGACTTCCACTATGGCCACAACGACTCCTGtgactgtaggtgggctaagcgtgagtgttacgaatcctgctgcgggcgctacgggtaacgttactgactcaaaattagcgcagtcgtcattgcaacagcagcagcagcaacaccaacaacagcagcaacagacactaagcttaactggtggcacaacagtcacagcagcctccacaacaactgcactaataccaaatgcaccaaacTTGAGCAAGTATTGGGTGGTTTCGAATGGCCAAGCGCTTCCTTATAACATTTTACCTAAtggtacaataatcacaccgcatcagcgacagccaacagcaactgagcaacatacgcatcctcaacaacaggttcagcagcagcaacagcaacaacaaccacagcaacaaacaaatgcgttgcaaatacatgctgcattaaaccaaaatgatgacaatcgacaacaacagcagcatgtttcacagcagcaacatgtagccgccgcagtgcagcaggcccagcaacctcaacagcagcagcagcagcaacaacaacagcaacaacaattattacaacgagaaAATATTAAAGAGGAGAAACCATTTTCAGACAACGGAAAGTTAAATCAATCAATTGTTATGCAACACGTAAGCGCAGCGGCGTCGTCCGCACCGACGACGTCTGGCGCCACCACTATTACTTTGGGTGCACCGAAAACCGAAATAAAAGAGGATGTTGGAATGGGCAAACCGCCCCCTGGCATTGAAATGTATAAAGTTAACATTGAGGACATCTCACAGCTTTTCACCTATCACGAAGTTTTTGGCAAAATTCATGGcgatgtcatgaatcagcaattggccgcacatgcagtgcccaatgctgcgccgccaccaacacatggtaatgcgagcaacaatgctgcagttgcggccgtagttgctagcgctaatgctgctgccgctgcagcagctgcggctgcggcggccgcaaatacaacaagtggtggtgtggtggcgcccacaacaacgaccaatctaacgacggcaatcagtaccagtggcacaacaactgcgccagccaccgctgtaacagcaacTCCCACAGTGACCGGTGAATTGTTGATGCCAAAAATGGAGGGTGGCCTGCCGGTTGTGGATCAAACGACAACAATCACCCTCGCCCCCGATGGCACACCAATCGCTACCGGCACACATGTCTGCGACATTTGTGGCAAAATATTCCAATTTCGCTACCAATTGATCGTGCATCGACGATATCATAGCGAACGTAAACCATTcaattgtcaggtgtgtggtcagggtttcaccacctcgcaggatttgacgcggcacggcaagatacacatcggtggaccgatgtttacgtgcatcgtttgtttcaatgtattcgccaacaatgccagtctcgaacgtcatatgaaacgacattcaaccgataagccattcgcatgcacgatctgtcagaagacttttgcacgcaaagaacatttggataatcattttcgttcgcatacgggcgagacgccgttccggtgccagtattgtgctaagactttcacacgcaaggaacacatggtgaatcatgtgcgtaaacacacgggtgagacgccacatcgttgcgatatttgtaagaagtcctttacgcgcaaggaacactatgtcaaccactacatgtggcacactgGTCAAACACCACATCAGTGTGATGTATGTGGCAAGAAATATACGCGCAAAGAGCACCTAGCCAATCATATGCGTTCACACACTAATGACACACCATTCAGATGTGAGATTTGCGGCAAGAGTTTCAGTCGCAAGGAGCACTTCACCAATCACATTCTCTGGCATACAGGCGAAACTCCgcatcggtgcgatttttgttcgaaaacgtttacacgcaaggagcatttgttgaatcatgtacgccaacataccggcgaatcgcctcatcgttgcacctattgtttgaaaacgttcacacgtaaggaacacctagtgaaccacatacgtcagcacaccggtgaaacgccgtttaaatgcacctactgcacgaaggcatttacgcgtaaagatcacatggtgaatcatataaggcaacataccggcgaatccccgcacaagtgcacatattgcacaaaaacattcacacgtaaagagcatctcgtgaatcatgtacgccaacatactggcgaatcaccacatcgctgcagctactgtaagaagacatttacccggaaggaacatttgacgaatcatgtgcgattgcatacgggcgattcgccgcacaaatgtgaatattgtcagaagacattcacgcgtaaggagcatctaaacaatcatatgcgtcagcactccagcgacaatccgcattgttgcaatgtttgcaataagccattcacacgcaaggagcatctgattaatcacatgtcacgttgccacactggcgatcgtcccttcgcttgcgaaacttgcggcaaatcgtttccgctcaaaggaAATCTCCTGTTTCATCAACGCAGTCACACCAAGGGCCAAGAATGCGAACGTCCGTTTTCATGCGAGAAATGTCCCAAAAACTTTATATGCAAGGGTCATCTTGTCTCGCACATGCGTTCGCACTCGGGTGAAAAACCGCACGCCTGCACTCTGTGCAGCAAAGCTTTTGTGGAGCGTGGCAATTTGAAGCGTCACATGAAGATGAACCATCCTGATGCGGTAATGCCACCACCGCCACAGCCGCATCCACAAATCCCAGCCGGTATATTGACGTCGGTCAAAGAGGAAATCAAACCAATATTTCttcctcatcaaacaccaacaatgcacaccatccaacagattacatcgggcgctgcagccgcaaatgccgtacagttggcgcccagtcttgtgccgttggttacctcaacgattacatcgcacaacagccagaaaccacagcaacagcagcagcagcagcaacaacaacaacaacagcagcagcagcagcaacaggcacatcaacaacaccaacagcaagtgcaacaacaacagcagcagcaagtgcaacaacagcaacagcagcatcaacaacaattacaacaacagcaactgctgcaattatcgatacaacatcaacaacaggaacaacatcgccaacatcagcaacagcaacagcagcaagcacatcaccaacaaacacaagcgcaggcgcaacagcaaacgcatgcgccacaaccacaagcgcagccacagccgcagcagccaccatcggtgcctatcgcactaatacaaaccgatccgagcgttttggcgcgcgcagccatgcaattgcagcatctaccagctaatgttgagcagcatccggtggtttactaa
Protein Sequence: MLQPQPQLVPRQQAAAQQHLHQQQQRDSMALNGGGGGGGGSGGGGSGNVTGTTPPTVAGGGTVAGGGGVVGVAGNTLIPLAVPAQHQPVSIATVTAAAIAAAAAGVGMTSTMATTTPVTVGGLSVSVTNPAAGATGNVTDSKLAQSSLQQQQQQHQQQQQQTLSLTGGTTVTAASTTTALIPNAPNLSKYWVVSNGQALPYNILPNGTIITPHQRQPTATEQHTHPQQQVQQQQQQQQPQQQTNALQIHAALNQNDDNRQQQQHVSQQQHVAAAVQQAQQPQQQQQQQQQQQQQLLQRENIKEEKPFSDNGKLNQSIVMQHVSAAASSAPTTSGATTITLGAPKTEIKEDVGMGKPPPGIEMYKVNIEDISQLFTYHEVFGKIHGDVMNQQLAAHAVPNAAPPPTHGNASNNAAVAAVVASANAAAAAAAAAAAAANTTSGGVVAPTTTTNLTTAISTSGTTTAPATAVTATPTVTGELLMPKMEGGLPVVDQTTTITLAPDGTPIATGTHVCDICGKIFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAVMPPPPQPHPQIPAGILTSVKEEIKPIFLPHQTPTMHTIQQITSGAAAANAVQLAPSLVPLVTSTITSHNSQKPQQQQQQQQQQQQQQQQQQQAHQQHQQQVQQQQQQQVQQQQQQHQQQLQQQQLLQLSIQHQQQEQHRQHQQQQQQQAHHQQTQAQAQQQTHAPQPQAQPQPQQPPSVPIALIQTDPSVLARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358224;
90% Identity: iTF_00082310;
80% Identity: -