Basic Information

Insect: Anastrepha ludens
Gene Symbol: -
Assembly: GCA_028408465.1
Location: JAPVRI010033665.1:8633-20087[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.8e-05 0.0081 18.0 1.7 1 23 508 530 508 530 0.97

2 18 1.5e-05 0.0025 19.6 0.4 1 23 536 558 536 558 0.97

3 18 0.0012 0.21 13.5 0.5 1 23 564 586 564 586 0.95

4 18 2.4e-05 0.004 18.9 3.1 1 23 592 614 592 614 0.97

5 18 5.4e-05 0.0092 17.8 4.7 1 23 620 642 620 642 0.99

6 18 9.9e-05 0.017 17.0 5.7 1 23 648 670 648 670 0.97

7 18 4.9e-07 8.3e-05 24.3 4.3 1 23 676 698 676 698 0.98

8 18 1.7e-07 3e-05 25.7 2.4 1 23 704 726 704 726 0.97

9 18 0.0001 0.017 17.0 6.7 1 23 732 754 732 754 0.97

10 18 2.9e-05 0.0049 18.7 6.5 1 23 760 782 760 782 0.98

11 18 4.9e-06 0.00084 21.1 4.5 1 23 788 810 788 810 0.98

12 18 1.8e-05 0.0031 19.3 7.1 1 23 816 838 816 838 0.98

13 18 9.3e-06 0.0016 20.2 7.6 1 23 844 866 844 866 0.97

14 18 1e-06 0.00018 23.2 7.7 1 23 872 894 872 894 0.98

15 18 0.00033 0.055 15.4 9.5 1 23 900 923 900 923 0.95

16 18 0.00027 0.046 15.6 0.5 1 23 929 951 929 951 0.97

17 18 0.0012 0.21 13.6 4.4 1 23 961 983 961 983 0.98

18 18 1.4e-05 0.0024 19.6 1.6 1 23 989 1012 989 1012 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.8e-05	0.0081	18.0	1.7	1	23	508	530	508	530	0.97
2	18	1.5e-05	0.0025	19.6	0.4	1	23	536	558	536	558	0.97
3	18	0.0012	0.21	13.5	0.5	1	23	564	586	564	586	0.95
4	18	2.4e-05	0.004	18.9	3.1	1	23	592	614	592	614	0.97
5	18	5.4e-05	0.0092	17.8	4.7	1	23	620	642	620	642	0.99
6	18	9.9e-05	0.017	17.0	5.7	1	23	648	670	648	670	0.97
7	18	4.9e-07	8.3e-05	24.3	4.3	1	23	676	698	676	698	0.98
8	18	1.7e-07	3e-05	25.7	2.4	1	23	704	726	704	726	0.97
9	18	0.0001	0.017	17.0	6.7	1	23	732	754	732	754	0.97
10	18	2.9e-05	0.0049	18.7	6.5	1	23	760	782	760	782	0.98
11	18	4.9e-06	0.00084	21.1	4.5	1	23	788	810	788	810	0.98
12	18	1.8e-05	0.0031	19.3	7.1	1	23	816	838	816	838	0.98
13	18	9.3e-06	0.0016	20.2	7.6	1	23	844	866	844	866	0.97
14	18	1e-06	0.00018	23.2	7.7	1	23	872	894	872	894	0.98
15	18	0.00033	0.055	15.4	9.5	1	23	900	923	900	923	0.95
16	18	0.00027	0.046	15.6	0.5	1	23	929	951	929	951	0.97
17	18	0.0012	0.21	13.6	4.4	1	23	961	983	961	983	0.98
18	18	1.4e-05	0.0024	19.6	1.6	1	23	989	1012	989	1012	0.96

Sequence Information

Coding Sequence: ATGTTGCAGCCACAGCCACAACTGGTACCAAGGCAACAAGCAGCAGCACAACAACATTTACATCAGCAACAGCAGAGAGATTTAATGGCGTTGAACggaggtggtggtggtggtggaagCGGCGGTGGCGGCTCCGGCAACGTCACAGGCACAACTCCCCCTACCGTAGCTGGTGGTGGCACCGTCGCTAGTGGAGGTGGTGTCGTTGGTGTTGCAGGCAATACTTTAATTCCGCTTGCAGTTCCTGCGCAGCATCAGCCGGTTTCAATTGCAACTGTGACAGCAGCCGCCATTGCCGCTGCAGCAGCAGGGGTAGGAATGACTTCCACTATGGCCACAACGACTCCTGTAACTGTAGGTGGGCTAAGCGTGAGTGTTACGAATCCTGCTGCGGGCGCTACGGGTAACGTTACTGACTCAAAATTAGCGCAGTCGTCattgcaacagcagcagcaacaacaccaacaacagcagcaacagacACTAAGCTTAACTGGTGGCACCACAGTCACAGCAGCCTCCACAACAACTGCACTAATACCAAATGCACCAAACttgAGCAAATATTGGGTAGTTTCGAATGGGCAAGCGCTTCCTTATAACATTTTACCTAACGGTACAATAATCACACCGCATCAGCGACAGCCAACAGCAACTGAGCAACATACGCATCCTCAACAACAggttcagcagcagcagcagcaacagcaacaacaaccacagcaACAAACAAATGCGTTGCAAATACatgCTGCATTAAACCAAAATGATGACAAtcgacaacaacagcagcatgtTTCACAACAGCAACATGTAGCCGCCGCAGTGCAGCAGGCCCAGCAAcctcaacagcagcaacagcagcaacaacaattattACAACGAGAAAATATTAAAGAGGAGAAACCATTTTCAGACAACGGAAAGTTAAATCAATCAATTGTTATGCAACACGTAAGCGCAGCGGCGTCGTCCGCACCGACGACGTCTGGCGCCACCACCATTACTTTGGGTGCACCGAAAACCGAAATAAAAGAGGATGTTGGAATGGGCAAACCGCCCCCTGGCATTGAAATGTATAAAGTTAACATTGAGGACATCTCACAGCTTTTCACCTATCACGaagtttttggtaaaattcATGGCGATGTCATGAATCAGCAATTGGCCGCACATGCAGTGCCCAATGCTGCGCCGCCACCAACACATGGTAATGCGAGCAACAATGCTGCAGTTGCGGCCGTAGTTGCTAGCGCTAATGCTGCTGCCGctgcagcagctgcggctgcggcggccgcaaATACAACAAGTGGTGGTGTGGTGGCGCCCACAACAACGACCAATCTAACGACGGCAATCAGTACCAGTGGCACAACAACTGCGCCAGCCACCGCTGTAACAGCAACTCCCACAGTGACCGGCGAATTGTTGATGCCAAAAATGGAGGGTGGCCTGCCGGTTGTGGATCAAACGACAACAATCACCCTCGCCCCCGATGGCACACCTATCGCTACCGGCACGCATGTCTGCGACATTTGTGGCAAAATATTCCAATTTCGCTACCAATTGATCGTGCATCGACGATATCACAGCGAACGTAAACCATTCAATTGTCAGGTGTGTGGTCAGGGTTTCACCACCTCGCAGGATTTGACGCGGCACGGCAAGATACACATCGGTGGACCGATGTTTACGTGCATCGTTTGTTTCAATGTATTCGCCAACAATGCCAGTCTCGAACGTCATATGAAACGACATTCAACCGATAAGCCATTCGCATGCACGATCTGTCAGAAGACTTTTGCACGCAAAGAACATTTGGATAATCATTTTCGTTCGCATACGGGCGAGACGCCGTTCCGGTGCCAGTATTGTGCTAAGACTTTCACACGCAAAGAACACATGGTGAATCATGTGCGTAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTCAACCACTACATGTGGCACACTGGTCAAACACCACATCAGTGTGATGTATGTGGCAAGAAATATACGCGCAAAGAGCACCTAGCCAATCATATGCGTTCACACACTAATGACACACCATTCAGATGTGAGATTTGCGGCAAGAGTTTCAGTCGCAAGGAGCACTTCACCAATCACATTctctggcatacagGCGAAACTCCCCATCGCTGCGATTTTTGTTCGAAAACGTTTACACGCAAGGAGCATTTGTTGAATCATGTACGCCAACATACCGGCGAATCGCCTCATCGTTGCACCTATTGTTTGAAAACGTTCACACGTAAGGAACACCTAGTGAACCACATACGTCAGCACACCGGTGAAACGCCGTTTAAATGCACCTACTGCACGAAGGCATTTACGCGTAAAGATCACATGGTGAATCATATAAGGCAACATACCGGCGAATCCCCGCACAAGTGCACATATTGCACAAAAACATTCACACGTAAAGAGCATCTCGTGAATCATGTACGCCAACATACTGGCGAATCACCACATCGCTGCAGCTACTGTAAGAAGACATTTACCCGGAAGGAACATTTGACGAATCATGTGCGATTGCATACGGGCGATTCGCCGCACAAATGTGAATATTGTCAGAAGACATTCACGCGTAAGGAGCATCTAAACAATCATATGCGTCAGCACTCCAGCGACAATCCGCATTGTTGCAATGTTTGCAATAAGCCATTCACACGCAAGGAGCATCTGATTAATCACATGTCACGTTGCCACACTGGCGATCGTCCCTTCGCTTGCGAAACTTGTGGCAAATCGTTTCCGCTCAAAGGAAATCTGCTGTTTCATCAACGCAGTCACACCAAGGGCCAAGAATGCGAACGTCCGTTTTCATGCGAGAAATGTCCCAAAAACTTTATATGCAAGGGTCATCTTGTCTCGCACATGCGTTCGCACTCGGGTGAAAAACCACACGCCTGCACTCTGTGCAGCAAAGCTTTTGTGGAGCGGGGCAATTTGAAGCGTCACATGAAGATGAACCATCCTGATGCGGTAATGCCACCACCGCCACAGCCGCATCCACAAATCCCAGCCGGTATATTGACGTCGGTCAAAGAGGAAATCAAACCAATATTTCTTCCTCATCAAACACCAACAATGCACACCATCCAACAGATTACATCGGGCGCTGCAGCCGCAAATGCCGTACAGTTGGCGCCCAGTCTTGTGCCGTTGGTTACCTCAACGATTACATCGCACAACAGCCAGAAaccacagcaacaacagcagcagcagcaacaacaacaacaacaacagcagcagcagcaacaggcacatcaacaacaccaacaacaagtgcaacaacaacagcagcagcaagtgcagcaacagcaacagcagcatcaacaacaattacaacaacagcaactgtTGCAATTATCgatacaacatcaacaacaggAACAACATCGCCAacatcagcaacagcaacagcagcaagcaCATCACCAACAAACACAAGCGCAGGCGCAACAGCAAACGCATGCGCCACAACCACAAGCGCAGCCACAGCCGCAGCAGCCACCATCGGTGCCTATCGCACTAATACAAACCGATCCGAGCGTTTTGGCGCGCGCAGCCATGCAATTGCAGCACCTGCCAGCTAATGTTGAGCAGCATCCGGTGGTTTACTAA
Protein Sequence: MLQPQPQLVPRQQAAAQQHLHQQQQRDLMALNGGGGGGGSGGGGSGNVTGTTPPTVAGGGTVASGGGVVGVAGNTLIPLAVPAQHQPVSIATVTAAAIAAAAAGVGMTSTMATTTPVTVGGLSVSVTNPAAGATGNVTDSKLAQSSLQQQQQQHQQQQQQTLSLTGGTTVTAASTTTALIPNAPNLSKYWVVSNGQALPYNILPNGTIITPHQRQPTATEQHTHPQQQVQQQQQQQQQQPQQQTNALQIHAALNQNDDNRQQQQHVSQQQHVAAAVQQAQQPQQQQQQQQQLLQRENIKEEKPFSDNGKLNQSIVMQHVSAAASSAPTTSGATTITLGAPKTEIKEDVGMGKPPPGIEMYKVNIEDISQLFTYHEVFGKIHGDVMNQQLAAHAVPNAAPPPTHGNASNNAAVAAVVASANAAAAAAAAAAAAANTTSGGVVAPTTTTNLTTAISTSGTTTAPATAVTATPTVTGELLMPKMEGGLPVVDQTTTITLAPDGTPIATGTHVCDICGKIFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAVMPPPPQPHPQIPAGILTSVKEEIKPIFLPHQTPTMHTIQQITSGAAAANAVQLAPSLVPLVTSTITSHNSQKPQQQQQQQQQQQQQQQQQQQAHQQHQQQVQQQQQQQVQQQQQQHQQQLQQQQLLQLSIQHQQQEQHRQHQQQQQQQAHHQQTQAQAQQQTHAPQPQAQPQPQQPPSVPIALIQTDPSVLARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358224;
90% Identity: iTF_00081499; iTF_00083245;
80% Identity: -