Acro035852.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_949315895.1
- Location
- OX438883.1:2754874-2771234[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.081 1.2e+03 -0.2 2.8 32 94 29 91 25 96 0.80 2 3 5.6e-77 8.4e-73 246.6 16.8 1 266 167 429 167 450 0.89 3 3 3 4.5e+04 -5.5 16.0 1 48 451 497 451 524 0.71
Sequence Information
- Coding Sequence
- ATGGGCAGGATCACAAAGATGGCTACACCTACCAACAGTGATGTGGAGAGCGCTGGTGACGCGTTTACTGATGGTGATTTTGATGACAGCGATGATGAAACTGTCTTAGAGCGGAGTGAGGACTCTCCCAAATCTCAAATTTCTGTTAATGAAACTATGAATGCAGTCGTCAAAAGTAATCGTCACAATAGCTCAAGCGATGTTTCTAAGGCACATGCTAATGGTCTCGATCATCAACCCAAGGTTAATGGACTAAAGAACAGTGATAAGGATCATTCTAGTGCGATGGAGTGTCGCTCTAATGGTGATGTGCTTGAATTCAGAAGGGATTCTCATGGTGATCAGAATCCCTCTATTGTTGGAATCATTGGAGATCAACATAGTCATTTTTGCGGCTTGTTGACCTCGCCGAAGCCGGCGAGCGACACAAGACACAACCCCGACATGTCATCACCGGAGCTCGTTCTGCGAATCGCTGGTAGACTCATTTTACTTTTTGCAGAACAGCGTCTCGCTGCACGGCGGGCCGCGCGGGCGGAGGCGCGGGAGATCCGCATGCGGGAGCTCGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCGGACAAGGCGTACGACATGTACGCGGGCAAGCTGCCGGAGACGGTGGCCGGCAGACGTGGCGGGTCGCGCCTGGCGGGCCTCAGCCCGGGCGGGCTGCACTCCCCGCGGAGGAGCTCAGAGGACTCGGCGGATGACGTCTTCAACATCAAAGATCTCAGGCACGAGCTGAAAGAAGTCGAGGAGAAATTCCGAAAGGCTATGATCCTCAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAACTGGAGCTGCTGAAGGACCGGATAGAGGAGCTGCAGGAGGAGTACGCGCAACTATCGCGCGAACACAAAGAGAAATGCTCATCCCACGAGCGTCTAAAACGCGAGCACGCGTCCCTCGAGGCGGAAGTGACGTGCGCGCGGGACGCGGTGCGGGCGCGCGACGCGgccgcggcggcggcgggcttCGCGTTCGTGGAGGCGGGGCCCGCCGCCGACGTGCCCGGGTTCGGGGCCGTGCCGCCGCTGGCGCTGGTGTCGCACGAGGCGGACCAGATGTTGGGCGACGCGTCGGAGGGGACGCTAGACGTCCGGTTGCAGAAGCTGCTGAACTCGAAGCAGTCTCTGGAGTCTGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCGCGGCAGAACGGCGCCGCCGGACACCACGACCTGGAGCACGAGACTGAGCTGGAGACCCTCCGACGCTGCCTGACCGAAGCCAAGGCTCGAGCCGCCCGAGCGGAGGCCGAGGCCGCGCTGCAGGCCGCCGGCGCCGCCCGCCTCGAGGCTCAGGTCGCCCGCCTACGCGCCCGCCAGGACCACCAGGACGAGCACGAGGAAGTATTGAAGCAGGAGCGACGCAAGCTGCAGCGGGAGGCGCGAGAGGCCCTCAACCGGGTCGAAGAGTTGGAGACAGAAAACAGCCACCTCACCAAACGGCTGGACAAGCTCAAGAACGCCAAGTCAGCGCTGCTCAAGGAGCTGTGA
- Protein Sequence
- MGRITKMATPTNSDVESAGDAFTDGDFDDSDDETVLERSEDSPKSQISVNETMNAVVKSNRHNSSSDVSKAHANGLDHQPKVNGLKNSDKDHSSAMECRSNGDVLEFRRDSHGDQNPSIVGIIGDQHSHFCGLLTSPKPASDTRHNPDMSSPELVLRIAGRLILLFAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKLPETVAGRRGGSRLAGLSPGGLHSPRRSSEDSADDVFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLSREHKEKCSSHERLKREHASLEAEVTCARDAVRARDAAAAAAGFAFVEAGPAADVPGFGAVPPLALVSHEADQMLGDASEGTLDVRLQKLLNSKQSLESEVRKLKLQLNEERAARQNGAAGHHDLEHETELETLRRCLTEAKARAARAEAEAALQAAGAARLEAQVARLRARQDHQDEHEEVLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01280310;
- 90% Identity
- -
- 80% Identity
- -